4.3 Article

Optimized precursor to simplify assignment transfer between backbone resonances and stereospecifically labelled valine and leucine methyl groups: application to human Hsp90 N-terminal domain

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Multidisciplinary Sciences

Backbone-independent NMR resonance assignments of methyl probes in large proteins

Santrupti Nerli et al.

Summary: The authors introduce MAUS, a method for assigning methyl groups using raw NOE data. They demonstrate its effectiveness by using eight proteins in the 10-45kDa size range as test cases and show that MAUS yields 100% accurate assignments at high completeness levels.

NATURE COMMUNICATIONS (2021)

Article Biophysics

Backbone and methyl resonances assignment of the 87 kDa prefoldin from Pyrococcus horikoshii

Ricarda Torner et al.

Summary: Prefoldin acts as a co-chaperonin for Hsp60 in protein folding, with successful assignment of chemical shifts for the prefoldin from Pyrococcus horikoshii. The protein assembly captures and transfers client proteins for refolding, playing a key role in proteostasis.

BIOMOLECULAR NMR ASSIGNMENTS (2021)

Article Biochemistry & Molecular Biology

Spectral editing of intra- and inter-chain methyl-methyl NOEs in protein complexes

Ricarda Toerner et al.

JOURNAL OF BIOMOLECULAR NMR (2020)

Review Chemistry, Physical

Automated assignment of methyl NMR spectra from large proteins

Iva Pritisanac et al.

PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY (2020)

Article Biochemistry & Molecular Biology

NMRlib: user-friendly pulse sequence tools for Bruker NMR spectrometers

Adrien Favier et al.

JOURNAL OF BIOMOLECULAR NMR (2019)

Article Multidisciplinary Sciences

Integrated NMR and cryo-EM atomic-resolution structure determination of a half-megadalton enzyme complex

Diego F. Gauto et al.

NATURE COMMUNICATIONS (2019)

Article Multidisciplinary Sciences

Automatic structure-based NMR methyl resonance assignment in large proteins

Iva Pritisanac et al.

NATURE COMMUNICATIONS (2019)

Article Biochemistry & Molecular Biology

Methyl group reorientation under ligand binding probed by pseudocontact shifts e

Mathilde Lescanne et al.

JOURNAL OF BIOMOLECULAR NMR (2018)

Article Biochemistry & Molecular Biology

Automatic methyl assignment in large proteins by the MAGIC algorithm

Yoan R. Monneau et al.

JOURNAL OF BIOMOLECULAR NMR (2017)

Article Biochemistry & Molecular Biology

Methyl group assignment using pseudocontact shifts with PARAssign

Mathilde Lescanne et al.

JOURNAL OF BIOMOLECULAR NMR (2017)

Article Chemistry, Multidisciplinary

Automatic Assignment of Methyl-NMR Spectra of Supramolecular Machines Using Graph Theory

Iva Pritisanac et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2017)

Article Biochemistry & Molecular Biology

Methyl-specific isotopic labeling: a molecular tool box for solution NMR studies of large proteins

Rime Kerfah et al.

CURRENT OPINION IN STRUCTURAL BIOLOGY (2015)

Article Biochemistry & Molecular Biology

Specific labeling and assignment strategies of valine methyl groups for NMR studies of high molecular weight proteins

Guillaume Mas et al.

JOURNAL OF BIOMOLECULAR NMR (2013)

Article Biochemistry & Molecular Biology

MAP-XSII: an improved program for the automatic assignment of methyl resonances in large proteins

Yingqi Xu et al.

JOURNAL OF BIOMOLECULAR NMR (2013)

Article Multidisciplinary Sciences

The structure of the box C/D enzyme reveals regulation of RNA methylation

Audrone Lapinaite et al.

NATURE (2013)

Article Multidisciplinary Sciences

Unraveling the Mechanism of Protein Disaggregation Through a ClpB-DnaK Interaction

Rina Rosenzweig et al.

SCIENCE (2013)

Article Biochemistry & Molecular Biology

Methionine Scanning as an NMR Tool for Detecting and Analyzing Biomolecular Interaction Surfaces

Mira C. Stoffregen et al.

STRUCTURE (2012)

Article Biochemistry & Molecular Biology

A systematic mutagenesis-driven strategy for site-resolved NMR studies of supramolecular assemblies

Carlos Amero et al.

JOURNAL OF BIOMOLECULAR NMR (2011)

Article Biochemistry & Molecular Biology

Dynamic Interaction of Hsp90 with Its Client Protein p53

Sung Jean Park et al.

JOURNAL OF MOLECULAR BIOLOGY (2011)

Article Multidisciplinary Sciences

N-terminal domain of human Hsp90 triggers binding to the cochaperone p23

G. Elif Karagoz et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Chemistry, Multidisciplinary

Stereospecific Isotopic Labeling of Methyl Groups for NMR Spectroscopic Studies of High-Molecular-Weight Proteins

Pierre Gans et al.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2010)

Article Biochemistry & Molecular Biology

An efficient protocol for the complete incorporation of methyl-protonated alanine in perdeuterated protein

Isabel Ayala et al.

JOURNAL OF BIOMOLECULAR NMR (2009)

Article Chemistry, Multidisciplinary

Fast Two-Dimensional NMR Spectroscopy of High Molecular Weight Protein Assemblies

Carlos Amero et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2009)

Article Chemistry, Multidisciplinary

A new labeling method for methyl transverse relaxation-optimized spectroscopy NMR spectra of alanine residues

Rivka L. Isaacson et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2007)

Article Multidisciplinary Sciences

Quantitative dynamics and binding studies of the 20S proteasome by NMR

Remco Sprangers et al.

NATURE (2007)

Article Chemistry, Multidisciplinary

High-accuracy distance measurement between remote methyls in specifically protonated proteins

Remy Sounier et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2007)

Article Biochemistry & Molecular Biology

NMR backbone assignment of the N-terminal domain of human HSP90

Doris M. Jacobs et al.

JOURNAL OF BIOMOLECULAR NMR (2006)

Article Biochemistry & Molecular Biology

The CCPN data model for NMR spectroscopy: Development of a software pipeline

WF Vranken et al.

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2005)

Article Chemistry, Multidisciplinary

High-resolution four-dimensional 1H-13C NOE spectroscopy using methyl-TROSY, sparse data acquisition, and multidimensional decomposition

V Tugarinov et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2005)

Article Biochemistry & Molecular Biology

An isotope labeling strategy for methyl TROSY spectroscopy

V Tugarinov et al.

JOURNAL OF BIOMOLECULAR NMR (2004)

Article Chemistry, Multidisciplinary

Stereospecific NMR assignments of prochiral methyls, rotameric states and dynamics of valine residues in malate synthase G

V Tugarinov et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2004)

Article Chemistry, Multidisciplinary

Ile, Leu, and Val methyl assignments of the 723-residue malate synthase G using a new labeling strategy and novel NMR methods

V Tugarinov et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2003)

Article Biochemistry & Molecular Biology

A sensitive and robust method for obtaining intermolecular NOEs between side chains in large protein complexes

JD Gross et al.

JOURNAL OF BIOMOLECULAR NMR (2003)

Article Chemistry, Multidisciplinary

NMR-based screening of proteins containing 13C-labeled methyl groups

PJ Hajduk et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2000)