4.4 Article

Formylglycine-Generating Enzyme-Like Proteins Constitute a Novel Family of Widespread Type VI Secretion System Immunity Proteins

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Editorial Material Biochemistry & Molecular Biology

Bacterial Defense against the Type VI Secretion System

Sophie Robitaille et al.

Summary: Bacteria have developed various systems for interbacterial competition, such as physical barriers, genetically encoded antidotes, and stress responses. Further research will reveal the interbacterial selective pressures impacting bacterial survival in nature.

TRENDS IN MICROBIOLOGY (2021)

Article Biochemistry & Molecular Biology

Immunity proteins of dual nuclease T6SS effectors function as transcriptional repressors

Sunil Kumar Yadav et al.

Summary: Bacteria utilize type VI secretion system (T6SS) to deliver antibacterial toxins to target co-habiting bacteria. Burkholderia gladioli strain NGJ1 deploys certain T6SS effectors (TseTBg), having both DNase and RNase activities to kill target bacteria. The associated immunity (TsiTBg) proteins harbor non-canonical helix-turn-helix motifs and demonstrate transcriptional repression activity, similar to the antitoxins of type II toxin-antitoxin (TA) systems.

EMBO REPORTS (2021)

Article Biochemistry & Molecular Biology

Biofilm Bacteria Use Stress Responses to Detect and Respond to Competitors

Bram Lories et al.

CURRENT BIOLOGY (2020)

Article Multidisciplinary Sciences

A comparative genomics methodology reveals a widespread family of membrane-disrupting T6SS effectors

Chaya M. Fridman et al.

NATURE COMMUNICATIONS (2020)

Review Cell Biology

TypeVIsecretion system effector proteins: Effective weapons for bacterial competitiveness

Ruth E. Hernandez et al.

CELLULAR MICROBIOLOGY (2020)

Article Multidisciplinary Sciences

Peptidoglycan editing provides immunity to Acinetobacter baumannii during bacterial warfare

Nguyen-Hung Le et al.

SCIENCE ADVANCES (2020)

Article Multidisciplinary Sciences

A bacterial cytidine deaminase toxin enables CRISPR-free mitochondrial base editing

Beverly Y. Mok et al.

NATURE (2020)

Article Microbiology

Interbacterial competition and anti-predatory behaviour of environmentalVibrio choleraestrains

Natalia C. Drebes Doerr et al.

ENVIRONMENTAL MICROBIOLOGY (2020)

Review Cell Biology

Defending against the Type Six Secretion System: beyond Immunity Genes

Steven J. Hersch et al.

CELL REPORTS (2020)

Article Biology

A novel class of polymorphic toxins in Bacteroidetes

Biswanath Jana et al.

LIFE SCIENCE ALLIANCE (2020)

Article Chemistry, Multidisciplinary

An Alternative Active Site Architecture for O2 Activation in the Ergothioneine Biosynthetic EgtB from Chloracidobacterium thermophilum

Anja R. Stampfli et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2019)

Article Biotechnology & Applied Microbiology

SignalP 5.0 improves signal peptide predictions using deep neural networks

Jose Juan Almagro Armenteros et al.

NATURE BIOTECHNOLOGY (2019)

Article Multidisciplinary Sciences

Formylglycine-generating enzyme binds substrate directly at a mononuclear Cu(I) center to initiate O2 activation

Mason J. Appel et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)

Article Biochemistry & Molecular Biology

Structural characterization of the Imm52 family protein TsiT in Pseudomonas aeruginosa

Zhun She et al.

PROTEIN SCIENCE (2019)

Review Microbiology

Type VI secretion system: a modular toolkit for bacterial dominance

Biswanath Jana et al.

FUTURE MICROBIOLOGY (2019)

Article Multidisciplinary Sciences

An interbacterial toxin inhibits target cell growth by synthesizing (p)ppApp

Shehryar Ahmad et al.

NATURE (2019)

Article Multidisciplinary Sciences

Human gut bacteria contain acquired interbacterial defence systems

Benjamin D. Ross et al.

NATURE (2019)

Article Multidisciplinary Sciences

A modular effector with a DNase domain and a marker for T6SS substrates

Biswanath Jana et al.

NATURE COMMUNICATIONS (2019)

Article Multidisciplinary Sciences

Multidrug-resistant plasmids repress chromosomally encoded T6SS to enable their dissemination

Gisela Di Venanzio et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)

Article Biochemical Research Methods

MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization

Kazutaka Katoh et al.

BRIEFINGS IN BIOINFORMATICS (2019)

Article Biochemistry & Molecular Biology

Diverse NADase effector families mediate interbacterial antagonism via the type VI secretion system

Jenny Y. Tang et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2018)

Article Biochemistry & Molecular Biology

PvdO is required for the oxidation of dihydropyoverdine as the last step of fluorophore formation in Pseudomonas fluorescens

Michael T. Ringel et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2018)

Editorial Material Biochemistry & Molecular Biology

Expanding the molecular weaponry of bacterial species

Juvenal Lopez et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2018)

Article Multidisciplinary Sciences

Exopolysaccharide protects Vibrio cholerae from exogenous attacks by the type 6 secretion system

Jonida Toska et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)

Article Microbiology

The type VI secretion system deploys antifungal effectors against microbial competitors

Katharina Trunk et al.

NATURE MICROBIOLOGY (2018)

Article Biochemistry & Molecular Biology

Copper is a Cofactor of the Formylglycine-Generating Enzyme

Matthias Knop et al.

CHEMBIOCHEM (2017)

Article Biochemistry & Molecular Biology

CDD/SPARCLE: functional classification of proteins via subfamily domain architectures

Aron Marchler-Bauer et al.

NUCLEIC ACIDS RESEARCH (2017)

Article Microbiology

T6SS: The bacterial fight club in the host gut

Thibault G. Sana et al.

PLOS PATHOGENS (2017)

Article Chemistry, Multidisciplinary

Structural Basis for Copper-Oxygen Mediated C-H Bond Activation by the Formylglycine-Generating Enzyme

Marcel Meury et al.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2017)

Article Biochemistry & Molecular Biology

Crystal structure of PvdO from Pseudomonas aeruginosa

Zenglin Yuan et al.

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2017)

Review Microbiology

Type VI secretion and anti-host effectors

Abderrahman Hachani et al.

CURRENT OPINION IN MICROBIOLOGY (2016)

Article Biochemistry & Molecular Biology

MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets

Sudhir Kumar et al.

MOLECULAR BIOLOGY AND EVOLUTION (2016)

Article Biochemistry & Molecular Biology

Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees

Ivica Letunic et al.

NUCLEIC ACIDS RESEARCH (2016)

Article Multidisciplinary Sciences

Salmonella Typhimurium utilizes a T6SS-mediated antibacterial weapon to establish in the host gut

Thibault G. Sana et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)

Article Chemistry, Multidisciplinary

Structure of the Sulfoxide Synthase EgtB from the Ergothioneine Biosynthetic Pathway

Kristina V. Goncharenko et al.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2015)

Letter Biochemical Research Methods

The I-TASSER Suite: protein structure and function prediction

Jianyi Yang et al.

NATURE METHODS (2015)

Article Biochemical Research Methods

The Phyre2 web portal for protein modeling, prediction and analysis

Lawrence A. Kelley et al.

NATURE PROTOCOLS (2015)

Review Microbiology

Secretion systems in Gram-negative bacteria: structural and mechanistic insights

Tiago R. D. Costa et al.

NATURE REVIEWS MICROBIOLOGY (2015)

Article Multidisciplinary Sciences

The type VI secretion system of Vibrio cholerae fosters horizontal gene transfer

Sandrine Borgeaud et al.

SCIENCE (2015)

Article Biochemical Research Methods

Diversity Within the O-linked Protein Glycosylation Systems of Acinetobacter Species

Nichollas E. Scott et al.

MOLECULAR & CELLULAR PROTEOMICS (2014)

Review Microbiology

Type VI secretion system effectors: poisons with a purpose

Alistair B. Russell et al.

NATURE REVIEWS MICROBIOLOGY (2014)

Review Biochemistry & Molecular Biology

VgrG, Tae, TIe, and beyond: the versatile arsenal of Type VI secretion effectors

Eric Durand et al.

TRENDS IN MICROBIOLOGY (2014)

Article Multidisciplinary Sciences

The Vibrio cholerae type VI secretion system employs diverse effector modules for intraspecific competition

Daniel Unterweger et al.

NATURE COMMUNICATIONS (2014)

Article Biochemical Research Methods

The structural basis of the Tle4-Tli4 complex reveals the self-protection mechanism of H2-T6SS in Pseudomonas aeruginosa

Defen Lu et al.

ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2014)

Article Biochemistry & Molecular Biology

Lytic Activity of the Vibrio cholerae Type VI Secretion Toxin VgrG-3 Is Inhibited by the Antitoxin TsaB

Teresa M. Brooks et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2013)

Review Microbiology

Type VI secretion system regulation as a consequence of evolutionary pressure

Sarah T. Miyata et al.

JOURNAL OF MEDICAL MICROBIOLOGY (2013)

Article Biochemistry & Molecular Biology

Structural Insights into the Pseudomonas aeruginosa Type VI Virulence Effector Tse1 Bacteriolysis and Self-protection Mechanisms

Jingjin Ding et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2012)

Article Biochemistry & Molecular Biology

Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega

Fabian Sievers et al.

MOLECULAR SYSTEMS BIOLOGY (2011)

Article Multidisciplinary Sciences

Type VI secretion delivers bacteriolytic effectors to target cells

Alistair B. Russell et al.

NATURE (2011)

Article Microbiology

A Type VI Secretion System of Pseudomonas aeruginosa Targets, a Toxin to Bacteria

Rachel D. Hood et al.

CELL HOST & MICROBE (2010)

Review Biochemistry & Molecular Biology

Sulfatase activities towards the regulation of cell metabolism and signaling in mammals

M. Buono et al.

CELLULAR AND MOLECULAR LIFE SCIENCES (2010)

Article Biochemistry & Molecular Biology

Function and structure of a prokaryotic formylglycine-generating enzyme

Brian L. Carlson et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2008)

Article Biochemical Research Methods

Detecting protein-protein interactions by far western blotting

Yuliang Wu et al.

NATURE PROTOCOLS (2007)

Article Biochemical Research Methods

Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences

Weizhong Li et al.

BIOINFORMATICS (2006)

Article Multidisciplinary Sciences

A general binding mechanism for all human sulfatases by the formylglycine-generating enzyme

D Roeser et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Biochemistry & Molecular Biology

Crystal structure of human pFGE, the paralog of the Cα-formylglycine-generating enzyme

A Dickmanns et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2005)

Article Biochemistry & Molecular Biology

MUSCLE: multiple sequence alignment with high accuracy and high throughput

RC Edgar

NUCLEIC ACIDS RESEARCH (2004)

Article Biochemistry & Molecular Biology

WebLogo: A sequence logo generator

GE Crooks et al.

GENOME RESEARCH (2004)

Article Biochemistry & Molecular Biology

A combined transmembrane topology and signal peptide prediction method

L Käll et al.

JOURNAL OF MOLECULAR BIOLOGY (2004)

Article Biochemistry & Molecular Biology

MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform

K Katoh et al.

NUCLEIC ACIDS RESEARCH (2002)