4.7 Review

Overview of strategies for developing high thermostability industrial enzymes: Discovery, mechanism, modification and challenges

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

Current perspectives for microbial lipases from extremophiles and metagenomics

Swati Verma et al.

Summary: Microbial lipases are widely used biocatalysts for environmental and industrial applications. Extremophile lipases exhibit higher activity and diversity, allowing for the design of biotransformation reactions with higher yields and less byproducts. Additionally, novel lipases can be discovered through analysis of unexplored nucleotide/metagenomic databases.

BIOCHIMIE (2021)

Article Agricultural Engineering

Recent advancements in the synthesis of novel thermostable biocatalysts and their applications in commercially important chemoenzymatic conversion processes

Aravind Suresh et al.

Summary: This review provides an overview of thermostable enzymes and their applications in various fields, with a special focus on enzymes produced by extremophilic bacteria. Different aspects of enzyme production, synthesis of thermozymes, and enzyme immobilization are discussed critically, along with the factors influencing enzyme production and future industrial trends in the production of chemicals using biocatalysts.

BIORESOURCE TECHNOLOGY (2021)

Review Biochemistry & Molecular Biology

Role of extremophiles and their extremozymes in biorefinery process of lignocellulose degradation

Dixita Chettri et al.

Summary: Extremeophiles and extremozymes play a crucial role in industrial applications, especially in lignocellulose degradation and biofuel production. Research on enhancing the stability and efficiency of extremozymes is being conducted to increase their industrial application value.

EXTREMOPHILES (2021)

Article Food Science & Technology

Using a novel hyperthermophilic amylopullulanase to simplify resistant starch preparation from rice starches

Hui Peng et al.

Summary: A novel bifunctional amylopullulanase APU_Aquae from hyperthermophilic bacterium Aquifex aeolicus was found to be highly thermostable and efficient in promoting the formation of resistant starch type III (RS3) in rice starch. This enzyme simplifies the process of enzymatic debranching treatment and could potentially improve industrial production of RS3.

JOURNAL OF FUNCTIONAL FOODS (2021)

Review Biotechnology & Applied Microbiology

Recent advances in the improvement of enzyme thermostability by structure modification

Zhe Xu et al.

CRITICAL REVIEWS IN BIOTECHNOLOGY (2020)

Review Food Science & Technology

Current methods and applications in computational protein design for food industry

Qiuming Chen et al.

CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION (2020)

Article Biochemistry & Molecular Biology

Improving the thermostability and activity of Paenibacillus pasadenensis chitinase through semi-rational design

Pei Xu et al.

INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES (2020)

Article Biochemistry & Molecular Biology

Enhancing the thermostability of Rhizopus chinensis lipase by rational design and MD simulations

Rui Wang et al.

INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES (2020)

Article Chemistry, Applied

Additional salt bridges improve the thermostability of 1,4-α-glucan branching enzyme

Xiaofeng Ban et al.

FOOD CHEMISTRY (2020)

Article Biochemistry & Molecular Biology

Structural and biochemical characterization of an extremely thermostable FMN-dependent NADH-indigo reductase from Bacillus smithii

Kazunari Yoneda et al.

INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES (2020)

Article Biochemistry & Molecular Biology

A thermophilic and thermostable xylanase from Caldicoprobacter algeriensis: Recombinant expression, characterization and application in paper biobleaching

Sonia Mhiri et al.

INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES (2020)

Review Agricultural Engineering

Thermophiles and the applications of their enzymes as new biocatalysts

Joaquin Atalah et al.

BIORESOURCE TECHNOLOGY (2019)

Article Biochemistry & Molecular Biology

Improvement of GH10 family xylanase thermostability by introducing of an extra α-helix at the C-terminal

Guangqi Li et al.

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2019)

Article Biochemistry & Molecular Biology

Biochemical characterization and mutational studies of a thermostable uracil DNA glycosylase from the hyperthermophilic euryarchaeon Thermococcus barophilus Ch5

Haoqiang Shi et al.

INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES (2019)

Review Biotechnology & Applied Microbiology

Recent studies on the biological production of D-mannose

Hao Wu et al.

APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2019)

Review Green & Sustainable Science & Technology

Recent trends in hyperthermophilic enzymes production and future perspectives for biofuel industry: A critical review

Reham Ebaid et al.

JOURNAL OF CLEANER PRODUCTION (2019)

Review Agricultural Engineering

Thermostable xylanases from thermophilic fungi and bacteria: Current perspective

B. S. Chadha et al.

BIORESOURCE TECHNOLOGY (2019)

Review Agricultural Engineering

Thermostable cellulases: Current status and perspectives

Anil K. Patel et al.

BIORESOURCE TECHNOLOGY (2019)

Review Agricultural Engineering

Thermostable phytase in feed and fuel industries

Ushasree Mrudula Vasudevan et al.

BIORESOURCE TECHNOLOGY (2019)

Review Agricultural Engineering

Thermozymes: Adaptive strategies and tools for their biotechnological applications

Sumit Kumar et al.

BIORESOURCE TECHNOLOGY (2019)

Review Agricultural Engineering

Improvements of thermophilic enzymes: From genetic modifications to applications

Huawen Han et al.

BIORESOURCE TECHNOLOGY (2019)

Review Biotechnology & Applied Microbiology

The state-of-the-art strategies of protein engineering for enzyme stabilization

Qian Liu et al.

BIOTECHNOLOGY ADVANCES (2019)

Article Biotechnology & Applied Microbiology

Critical effect of proline on thermostability of endoglucanase II from Penicillium verruculosum

Anna S. Dotsenko et al.

BIOCHEMICAL ENGINEERING JOURNAL (2019)

Review Food Science & Technology

Genetically modified food enzymes: a review

Yi Zhang et al.

CURRENT OPINION IN FOOD SCIENCE (2019)

Article Biotechnology & Applied Microbiology

Engineering the residues on A surface and C-terminal region to improve thermostability of nitrilase

Zhe Xu et al.

ENZYME AND MICROBIAL TECHNOLOGY (2018)

Article Agriculture, Multidisciplinary

Thermostability Improvement of the D-Allulose 3-Epimerase from Dorea sp CAG317 by Site-Directed Mutagenesis at the Interface Regions

Wenli Zhang et al.

JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY (2018)

Article Biochemistry & Molecular Biology

HotSpot Wizard 3.0: web server for automated design of mutations and smart libraries based on sequence input information

Lenka Sumbalova et al.

NUCLEIC ACIDS RESEARCH (2018)

Article Biochemistry & Molecular Biology

SWISS-MODEL: homology modelling of protein structures and complexes

Andrew Waterhouse et al.

NUCLEIC ACIDS RESEARCH (2018)

Article Biology

Disulfide bridge formation to increase thermostability of DFPase enzyme: A computational study

Mozafar Mohammadi et al.

COMPUTATIONAL BIOLOGY AND CHEMISTRY (2018)

Review Food Science & Technology

Protein engineering and its applications in food industry

Swati Kapoor et al.

CRITICAL REVIEWS IN FOOD SCIENCE AND NUTRITION (2017)

Article Biotechnology & Applied Microbiology

Improving the thermostability of Trichoderma reesei xylanase 2 by introducing disulfide bonds

Feng Tang et al.

ELECTRONIC JOURNAL OF BIOTECHNOLOGY (2017)

Review Biotechnology & Applied Microbiology

Estimating the success of enzyme bioprospecting through metagenomics: current status and future trends

Manuel Ferrer et al.

MICROBIAL BIOTECHNOLOGY (2016)

Article Chemistry, Physical

Thermostability of Enzymes from Molecular Dynamics Simulations

Tim Zeiske et al.

JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2016)

Article Biochemical Research Methods

Contribution of main chain and side chain atoms and their locations to the stability of thermophilic proteins

Dharma Rao Tompa et al.

JOURNAL OF MOLECULAR GRAPHICS & MODELLING (2016)

Review Multidisciplinary Sciences

The coming of age of de novo protein design

Po-Ssu Huang et al.

NATURE (2016)

Review Chemistry, Multidisciplinary

Protein thermostability engineering

H. Pezeshgi Modarres et al.

RSC ADVANCES (2016)

Article Biotechnology & Applied Microbiology

Improvement in the thermostability of a type A feruloyl esterase, AuFaeA, from Aspergillus usamii by iterative saturation mutagenesis

Xin Yin et al.

APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2015)

Article Biochemistry & Molecular Biology

The role of proline substitutions within flexible regions on thermostability of luciferase

Haoran Yu et al.

BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS (2015)

Article Biotechnology & Applied Microbiology

Stabilization of fungi-derived recombinant FAD-dependent glucose dehydrogenase by introducing a disulfide bond

Genki Sakai et al.

BIOTECHNOLOGY LETTERS (2015)

Article Biochemistry & Molecular Biology

Improvement of Trichoderma reesei xylanase II thermal stability by serine to threonine surface mutations

Dorra Zouari Ayadi et al.

INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES (2015)

Article Biotechnology & Applied Microbiology

Thermostability Improvement of a Streptomyces Xylanase by Introducing Proline and Glutamic Acid Residues

Kun Wang et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2014)

Article Biotechnology & Applied Microbiology

Directed evolution of Bacillus licheniformis lipase for improvement of thermostability

Bhawna Madan et al.

BIOCHEMICAL ENGINEERING JOURNAL (2014)

Review Biotechnology & Applied Microbiology

Engineering proteins for thermostability through rigidifying flexible sites

Haoran Yu et al.

BIOTECHNOLOGY ADVANCES (2014)

Article Biochemical Research Methods

Disulfide by Design 2.0: a web-based tool for disulfide engineering in proteins

Douglas B. Craig et al.

BMC BIOINFORMATICS (2013)

Review Chemistry, Multidisciplinary

Stabilizing biocatalysts

Andreas S. Bommarius et al.

CHEMICAL SOCIETY REVIEWS (2013)

Article Biochemistry & Molecular Biology

Role of Glycoside Phosphorylases in Mannose Foraging by Human Gut Bacteria

Simon Ladeveze et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2013)

Article Biotechnology & Applied Microbiology

Improving the thermostability of lipase Lip2 from Yarrowia lipolytica

Sai Wen et al.

JOURNAL OF BIOTECHNOLOGY (2013)

Article Biochemistry & Molecular Biology

Hydrophobic environment is a key factor for the stability of thermophilic proteins

M. Michael Gromiha et al.

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2013)

Article Biochemical Research Methods

Predicting folding free energy changes upon single point mutations

Zhe Zhang et al.

BIOINFORMATICS (2012)

Article Biochemistry & Molecular Biology

Toward the smallest active subdomain of a TIM-barrel fold: Insights from a truncated α-amylase

Mamdouh Ben Ali et al.

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2011)

Article Agricultural Engineering

Enhancement of the thermostability of the maltogenic amylase MAUS149 by Gly312Ala and Lys436Arg substitutions

Sameh Ben Mabrouk et al.

BIORESOURCE TECHNOLOGY (2011)

Article Biotechnology & Applied Microbiology

Enhancement of a bacterial laccase thermostability through directed mutagenesis of a surface loop

Nasrin Mollania et al.

ENZYME AND MICROBIAL TECHNOLOGY (2011)

Article Biochemistry & Molecular Biology

Underexposed polar residues and protein stabilization

Sara Ayuso-Tejedor et al.

PROTEIN ENGINEERING DESIGN & SELECTION (2011)

Article Evolutionary Biology

Evolution and thermodynamics of the slow unfolding of hyperstable monomeric proteins

Jun Okada et al.

BMC EVOLUTIONARY BIOLOGY (2010)

Article Biotechnology & Applied Microbiology

Development of thermostable lipase B from Candida antarctica (CalB) through in silico design employing B-factor and RosettaDesign

Hyun Sook Kim et al.

ENZYME AND MICROBIAL TECHNOLOGY (2010)

Article Biotechnology & Applied Microbiology

Enhancing the thermostability of α-glucosidase from Thermoanaerobacter tengcongensis MB4 by single proline substitution

Cheng Zhou et al.

JOURNAL OF BIOSCIENCE AND BIOENGINEERING (2010)

Article Chemistry, Physical

An insight into the thermostability of a pair of xylanases: the role of hydrogen bonds

Davi Serradella Vieira et al.

MOLECULAR PHYSICS (2009)

Article Chemistry, Medicinal

Thermostability of salt bridges versus hydrophobic interactions in proteins probed by statistical potentials

Benjamin Folch et al.

JOURNAL OF CHEMICAL INFORMATION AND MODELING (2008)

Article Biochemical Research Methods

Four-body scoring function for mutagenesis

Chris Deutsch et al.

BIOINFORMATICS (2007)

Article Nutrition & Dietetics

Cation-π interactions involving aromatic amino acids

Dennis A. Dougherty

JOURNAL OF NUTRITION (2007)

Article Multidisciplinary Sciences

Conformational entropy of alanine versus glycine in protein denatured states

Kathryn A. Scott et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Biochemical Research Methods

Iterative saturation mutagenesis (ISM) for rapid directed evolution of functional enzymes

Manfred T. Reetz et al.

NATURE PROTOCOLS (2007)

Review Biochemistry & Molecular Biology

Stability of biocatalysts

Karen M. Polizzi et al.

CURRENT OPINION IN CHEMICAL BIOLOGY (2007)

Article Biochemistry & Molecular Biology

Protein stability and surface electrostatics: A charged relationship

SS Strickler et al.

BIOCHEMISTRY (2006)

Article Biochemical Research Methods

Improvement of the thermostability and catalytic activity of a mesophilic family 11 xylanase by N-terminus replacement

JY Sun et al.

PROTEIN EXPRESSION AND PURIFICATION (2005)

Article Biochemistry & Molecular Biology

The FoldX web server: an online force field

J Schymkowitz et al.

NUCLEIC ACIDS RESEARCH (2005)

Review Microbiology

Metagenomics and industrial applications

P Lorenz et al.

NATURE REVIEWS MICROBIOLOGY (2005)

Review Biotechnology & Applied Microbiology

Structural features of thermozymes

WF Li et al.

BIOTECHNOLOGY ADVANCES (2005)

Article Biochemistry & Molecular Biology

Stabilization of Bacillus subtilis Lipase A by increasing the residual packing

T Abraham et al.

BIOCATALYSIS AND BIOTRANSFORMATION (2005)

Review Microbiology

Extremophiles as a source for novel enzymes

B van den Burg

CURRENT OPINION IN MICROBIOLOGY (2003)

Article Biochemistry & Molecular Biology

Predicting changes in the stability of proteins and protein complexes: A study of more than 1000 mutations

R Guerois et al.

JOURNAL OF MOLECULAR BIOLOGY (2002)

Review Microbiology

Hyperthermophilic enzymes: Sources, uses, and molecular mechanisms for thermostability

C Vieille et al.

MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2001)

Review Multidisciplinary Sciences

Life in extreme environments

LJ Rothschild et al.

NATURE (2001)

Article Biochemistry & Molecular Biology

Stabilization of hen egg white lysozyme by a cavity-filling mutation

T Ohmura et al.

PROTEIN SCIENCE (2001)

Article Biochemistry & Molecular Biology

Aromatic clusters: a determinant of thermal stability of thermophilic proteins

N Kannan et al.

PROTEIN ENGINEERING (2000)