相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。DeepGOPlus: improved protein function prediction from sequence
Maxat Kulmanov et al.
BIOINFORMATICS (2020)
Fundamentals of Recurrent Neural Network (RNN) and Long Short-Term Memory (LSTM) network
Alex Sherstinsky
PHYSICA D-NONLINEAR PHENOMENA (2020)
Effusion: prediction of protein function from sequence similarity networks
Jeffrey M. Yunes et al.
BIOINFORMATICS (2019)
Beyond Homology Transfer: Deep Learning for Automated Annotation of Proteins
Mohammad Nauman et al.
JOURNAL OF GRID COMPUTING (2019)
UniProt: a worldwide hub of protein knowledge
Alex Bateman et al.
NUCLEIC ACIDS RESEARCH (2019)
The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens
Naihui Zhou et al.
GENOME BIOLOGY (2019)
A survey on Image Data Augmentation for Deep Learning
Connor Shorten et al.
JOURNAL OF BIG DATA (2019)
DeepEfflux: a 2D convolutional neural network model for identifying families of efflux proteins in transporters
Semmy Wellem Taju et al.
BIOINFORMATICS (2018)
GOLabeler: improving sequence-based large-scale protein function prediction by learning to rank
Ronghui You et al.
BIOINFORMATICS (2018)
Beyond one-hot encoding: Lower dimensional target embedding
Pau Rodriguez et al.
IMAGE AND VISION COMPUTING (2018)
Prediction of human protein subcellular localization using deep learning
Leyi Wei et al.
JOURNAL OF PARALLEL AND DISTRIBUTED COMPUTING (2018)
DeepText2GO: Improving large-scale protein function prediction with deep semantic text representation
Ronghui You et al.
METHODS (2018)
Recent advances in convolutional neural networks
Jiuxiang Gu et al.
PATTERN RECOGNITION (2018)
Predicting human protein function with multi-task deep neural networks
Rui Fa et al.
PLOS ONE (2018)
Optimization Methods for Large-Scale Machine Learning
Leon Bottou et al.
SIAM REVIEW (2018)
DeepGO: predicting protein functions from sequence and interactions using a deep ontology-aware classifier
Maxat Kulmanov et al.
BIOINFORMATICS (2018)
The STRING database in 2017: quality-controlled protein-protein association networks, made broadly accessible
Damian Szklarczyk et al.
NUCLEIC ACIDS RESEARCH (2017)
DeepLoc: prediction of protein subcellular localization using deep learning
Jose Juan Almagro Armenteros et al.
BIOINFORMATICS (2017)
ImageNet Classification with Deep Convolutional Neural Networks
Alex Krizhevsky et al.
COMMUNICATIONS OF THE ACM (2017)
Xception: Deep Learning with Depthwise Separable Convolutions
Francois Chollet
30TH IEEE CONFERENCE ON COMPUTER VISION AND PATTERN RECOGNITION (CVPR 2017) (2017)
GoFDR: A sequence alignment based method for predicting protein functions
Qingtian Gong et al.
METHODS (2016)
FFPred 3: feature-based function prediction for all Gene Ontology domains
Domenico Cozzetto et al.
SCIENTIFIC REPORTS (2016)
An expanded evaluation of protein function prediction methods shows an improvement in accuracy
Yuxiang Jiang et al.
GENOME BIOLOGY (2016)
ProFET: Feature engineering captures high-level protein functions
Dan Ofer et al.
BIOINFORMATICS (2015)
Predicting Protein Function Using Multiple Kernels
Guoxian Yu et al.
IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS (2015)
The InterPro protein families database: the classification resource after 15 years
Alex Mitchell et al.
NUCLEIC ACIDS RESEARCH (2015)
CoMeta: Classification of Metagenomes Using k-mers
Jolanta Kawulok et al.
PLOS ONE (2015)
Information-theoretic evaluation of predicted ontological annotations
Wyatt T. Clark et al.
BIOINFORMATICS (2013)
A large-scale evaluation of computational protein function prediction
Predrag Radivojac et al.
NATURE METHODS (2013)
FFPred 2.0: Improved Homology-Independent Prediction of Gene Ontology Terms for Eukaryotic Protein Sequences
Federico Minneci et al.
PLOS ONE (2013)
NucleaRDB: information system for nuclear receptors
Bas Vroling et al.
NUCLEIC ACIDS RESEARCH (2012)
Analysis of protein function and its prediction from amino acid sequence
Wyatt T. Clark et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2011)
TCDB: the Transporter Classification Database for membrane transport protein analyses and information
Milton H. Saier et al.
NUCLEIC ACIDS RESEARCH (2006)
Innovation - Target discovery
MA Lindsay
NATURE REVIEWS DRUG DISCOVERY (2003)
The Protein Information Resource
CH Wu et al.
NUCLEIC ACIDS RESEARCH (2003)
The Lipase Engineering Database: a navigation and analysis tool for protein families
M Fischer et al.
NUCLEIC ACIDS RESEARCH (2003)
The COG database: a tool for genome-scale analysis of protein functions and evolution
RL Tatusov et al.
NUCLEIC ACIDS RESEARCH (2000)
The Protein Data Bank
HM Berman et al.
NUCLEIC ACIDS RESEARCH (2000)
分享论文
