相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Computational modeling and molecular dynamics simulations of mammalian cytoplasmic tyrosyl-tRNA synthetase and its complexes with substrates
Vladyslav O. Kravchuk et al.
JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS (2017)
Examining the role of protein structural dynamics in drug resistance in Mycobacterium tuberculosis
Daniel J. Shaw et al.
CHEMICAL SCIENCE (2017)
MD Simulations of tRNA and Aminoacyl-tRNA Synthetases: Dynamics, Folding, Binding, and Allostery
Rongzhong Li et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2015)
ff14SB: Improving the Accuracy of Protein Side Chain and Backbone Parameters from ff99SB
James A. Maier et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2015)
Structural states of the flexible catalytic loop of M-tuberculosis tyrosyl-tRNA synthetase in different enzyme-substrate complexes
Vasyl V. Mykuliak et al.
EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS (2014)
The Structural Basis of ATP as an Allosteric Modulator
Shaoyong Lu et al.
PLOS COMPUTATIONAL BIOLOGY (2014)
Aminoacyl-tRNA synthetases as drug targets in eukaryotic parasites
James S. Pham et al.
INTERNATIONAL JOURNAL FOR PARASITOLOGY-DRUGS AND DRUG RESISTANCE (2014)
PTRAJ and CPPTRAJ: Software for Processing and Analysis of Molecular Dynamics Trajectory Data
Daniel R. Roe et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2013)
MMPBSA.py: An Efficient Program for End-State Free Energy Calculations
Bill R. Miller et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2012)
Structural dynamics of the aminoacylation and proofreading functional cycle of bacterial leucyl-tRNA synthetase
Andres Palencia et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2012)
Molecular dynamics simulations and drug discovery
Jacob D. Durrant et al.
BMC BIOLOGY (2011)
Malaria parasite tyrosyl-tRNA synthetase secretion triggers pro-inflammatory responses
Tarun Kumar Bhatt et al.
NATURE COMMUNICATIONS (2011)
A Role for Both Conformational Selection and Induced Fit in Ligand Binding by the LAO Protein
Daniel-Adriano Silva et al.
PLOS COMPUTATIONAL BIOLOGY (2011)
From Induced Fit to Conformational Selection: A Continuum of Binding Mechanism Controlled by the Timescale of Conformational Transitions
Huan-Xiang Zhou
BIOPHYSICAL JOURNAL (2010)
Induced fit, conformational selection and independent dynamic segments: an extended view of binding events
Peter Csermely et al.
TRENDS IN BIOCHEMICAL SCIENCES (2010)
Validation of Molecular Docking Programs for Virtual Screening against Dihydropteroate Synthase
Kirk E. Hevener et al.
JOURNAL OF CHEMICAL INFORMATION AND MODELING (2009)
Comparative structural dynamics of Tyrosyl-tRNA synthetase complexed with different substrates explored by molecular dynamics
Tong Li et al.
EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS (2008)
Structural plasticity of an aminoacyl-tRNA synthetase active site
JM Turner et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Molecular dynamics and protein function
M Karplus et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Structural snapshots of the KMSKS loop rearrangement for amino acid activation by bacterial tyrosyl-tRNA synthetase
T Kobayashi et al.
JOURNAL OF MOLECULAR BIOLOGY (2005)
Development and testing of a general amber force field
JM Wang et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2004)
Class I tyrosyl-tRNA synthetase has a class II mode of cognate tRNA recognition
A Yaremchuk et al.
EMBO JOURNAL (2002)
Intrinsic conformational energetics associated with the glycosyl torsion in DNA: A quantum mechanical study
N Foloppe et al.
BIOPHYSICAL JOURNAL (2002)
分享论文
