相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Extending the small-molecule similarity principle to all levels of biology with the Chemical Checker
Miquel Duran-Frigola et al.
NATURE BIOTECHNOLOGY (2020)
A new wave of innovation in Semantic web tools for drug discovery
Samantha Kanza et al.
EXPERT OPINION ON DRUG DISCOVERY (2019)
Drug prioritization using the semantic properties of a knowledge graph
Tareq B. Malas et al.
SCIENTIFIC REPORTS (2019)
PANTHER version 14: more genomes, a new PANTHER GO-slim and improvements in enrichment analysis tools
Huaiyu Mi et al.
NUCLEIC ACIDS RESEARCH (2019)
PubChem 2019 update: improved access to chemical data
Sunghwan Kim et al.
NUCLEIC ACIDS RESEARCH (2019)
The Possibility of Systematic Research Fraud Targeting Under-Studied Human Genes: Causes, Consequences, and Potential Solutions
Jennifer A. Byrne et al.
BIOMARKER INSIGHTS (2019)
WikiPathways: a multifaceted pathway database bridging metabolomics to other omics research
Denise N. Slenter et al.
NUCLEIC ACIDS RESEARCH (2018)
Why a P-Value is Not Enough
Federico Solla et al.
CLINICAL SPINE SURGERY (2018)
Open Targets: a platform for therapeutic target identification and validation
Gautier Koscielny et al.
NUCLEIC ACIDS RESEARCH (2017)
Mass spectrometry for the discovery of biomarkers of sepsis
Katelyn R. Ludwig et al.
MOLECULAR BIOSYSTEMS (2017)
LimTox: a web tool for applied text mining of adverse event and toxicity associations of compounds, drugs and genes
Andres Canada et al.
NUCLEIC ACIDS RESEARCH (2017)
MetaNetX/MNXref - reconciliation of metabolites and biochemical reactions to bring together genome-scale metabolic networks
Sebastien Moretti et al.
NUCLEIC ACIDS RESEARCH (2016)
ChEBI in 2016: Improved services and an expanding collection of metabolites
Janna Hastings et al.
NUCLEIC ACIDS RESEARCH (2016)
Metabolomics: beyond biomarkers and towards mechanisms
Caroline H. Johnson et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2016)
Extraction of chemical-induced diseases using prior knowledge and textual information
Ewoud Pons et al.
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION (2016)
Literature information in PubChem: associations between PubChem records and scientific articles
Sunghwan Kim et al.
JOURNAL OF CHEMINFORMATICS (2016)
ClassyFire: automated chemical classification with a comprehensive, computable taxonomy
Yannick Djoumbou Feunang et al.
JOURNAL OF CHEMINFORMATICS (2016)
Computational approaches in target identification and drug discovery
Theodora Katsila et al.
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL (2016)
Two Similarity Metrics for Medical Subject Headings (MeSH): An Aid to Biomedical Text Mining and Author Name Disambiguation
Neil R. Smalheiser et al.
JOURNAL OF BIOMEDICAL DISCOVERY AND COLLABORATION (2016)
The role of ontologies in biological and biomedical research: a functional perspective
Robert Hoehndorf et al.
BRIEFINGS IN BIOINFORMATICS (2015)
PubChemRDF: towards the semantic annotation of PubChem compound and substance databases
Gang Fu et al.
JOURNAL OF CHEMINFORMATICS (2015)
Workflow4Metabolomics: a collaborative research infrastructure for computational metabolomics
Franck Giacomoni et al.
BIOINFORMATICS (2015)
Molecular genetics and diagnosis of phenylketonuria: state of the art
Nenad Blau et al.
EXPERT REVIEW OF MOLECULAR DIAGNOSTICS (2014)
The ChEMBL bioactivity database: an update
A. Patricia Bento et al.
NUCLEIC ACIDS RESEARCH (2014)
Alkemio: association of chemicals with biomedical topics by text and data mining
Jose A. Gijon-Correas et al.
NUCLEIC ACIDS RESEARCH (2014)
Semantic Web technologies for the big data in life sciences
Hongyan Wu et al.
BIOSCIENCE TRENDS (2014)
Human symptoms-disease network
XueZhong Zhou et al.
NATURE COMMUNICATIONS (2014)
The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery
Michel Dumontier et al.
JOURNAL OF BIOMEDICAL SEMANTICS (2014)
Compensating for literature annotation bias when predicting novel drug-disease relationships through Medical Subject Heading Over-representation Profile (MeSHOP) similarity
Warren A. Cheung et al.
BMC MEDICAL GENOMICS (2013)
The ChEMBL database as linked open data
Egon L. Willighagen et al.
JOURNAL OF CHEMINFORMATICS (2013)
UniChem: a unified chemical structure cross-referencing and identifier tracking system
Jon Chambers et al.
JOURNAL OF CHEMINFORMATICS (2013)
Metab2MeSH: annotating compounds with medical subject headings
Maureen A. Sartor et al.
BIOINFORMATICS (2012)
Quantitative biomedical annotation using medical subject heading over-representation profiles (MeSHOPs)
Warren A. Cheung et al.
BMC BIOINFORMATICS (2012)
Open PHACTS: semantic interoperability for drug discovery
Antony J. Williams et al.
DRUG DISCOVERY TODAY (2012)
FaBiO and CiTO: Ontologies for describing bibliographic resources and citations
Silvio Peroni et al.
JOURNAL OF WEB SEMANTICS (2012)
Text-mining solutions for biomedical research: enabling integrative biology
Dietrich Rebholz-Schuhmann et al.
NATURE REVIEWS GENETICS (2012)
PubChem's BioAssay Database
Yanli Wang et al.
NUCLEIC ACIDS RESEARCH (2012)
The Chemical Information Ontology: Provenance and Disambiguation for Chemical Data on the Biological Semantic Web
Janna Hastings et al.
PLOS ONE (2011)
The BridgeDb framework: standardized access to gene, protein and metabolite identifier mapping services
Martijn P. van Iersel et al.
BMC BIOINFORMATICS (2010)
MSEA: a web-based tool to identify biologically meaningful patterns in quantitative metabolomic data
Jianguo Xia et al.
NUCLEIC ACIDS RESEARCH (2010)
A Case Study of Salami Slicing: Pooled Analyses of Duloxetine for Depression
Glen I. Spielmans et al.
PSYCHOTHERAPY AND PSYCHOSOMATICS (2010)
Computational toxicology: an overview of the sources of data and of modelling methods
Florian Nigsch et al.
EXPERT OPINION ON DRUG METABOLISM & TOXICOLOGY (2009)
Evaluation of query expansion using MeSH in PubMed
Zhiyong Lu et al.
INFORMATION RETRIEVAL (2009)
A tale of two citations
Mounir Errami et al.
NATURE (2008)
PolySearch: a web-based text mining system for extracting relationships between human diseases, genes, mutations, drugs and metabolites
Dean Cheng et al.
NUCLEIC ACIDS RESEARCH (2008)
How to decide which are the most pertinent overly-represented features during gene set enrichment analysis
Roland Barriot et al.
BMC BIOINFORMATICS (2007)
Knowledge networks in the age of the Semantic Web
Eric Neumann et al.
BRIEFINGS IN BIOINFORMATICS (2007)
The Comparative Toxicogenomics Database (CTD): A resource for comparative toxicological studies
C. J. Mattingly et al.
JOURNAL OF EXPERIMENTAL ZOOLOGY PART A-ECOLOGICAL AND INTEGRATIVE PHYSIOLOGY (2006)
DrugBank: a comprehensive resource for in silico drug discovery and exploration
David S. Wishart et al.
NUCLEIC ACIDS RESEARCH (2006)
A Practical Comparison Between Thesaurus and Ontology Techniques As a Basis for Search Improvement
Soonho Kim et al.
JOURNAL OF AGRICULTURAL & FOOD INFORMATION (2006)
Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
A Subramanian et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
The Protein Data Bank
HM Berman et al.
NUCLEIC ACIDS RESEARCH (2000)