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Andrey Abramov et al.
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Yaxin Xue et al.
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Anirban Chakraborty et al.
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Alexander Burkert et al.
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Renxing Liang et al.
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A. V. Lupachev et al.
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Genomic and transcriptomic insights into the ecology and metabolism of benthic archaeal cosmopolitan, Thermoprofundales (MBG-D archaea)
Zhichao Zhou et al.
ISME JOURNAL (2019)
Methane in Gas Shows from Boreholes in Epigenetic Permafrost of Siberian Arctic
Gleb Kraev et al.
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Clinical and Biological Features of Cutibacterium (Formerly Propionibacterium) avidum, an Underrecognized Microorganism
Stephane Corvec
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Potential for primary productivity in a globally-distributed bacterial phototroph
E. D. Graham et al.
ISME JOURNAL (2018)
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Chen Cai et al.
ISME JOURNAL (2018)
KBase: The United States Department of Energy Systems Biology Knowledgebase
Adam P. Arkin et al.
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Genome-centric view of carbon processing in thawing permafrost
Ben J. Woodcroft et al.
NATURE (2018)
A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life
Donovan H. Parks et al.
NATURE BIOTECHNOLOGY (2018)
Phylogenetically Novel Uncultured Microbial Cells Dominate Earth Microbiomes
Karen G. Lloyd et al.
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Metagenomic Analysis of Microbial Community Compositions and Cold-Responsive Stress Genes in Selected Antarctic Lacustrine and Soil Ecosystems
Hyunmin Koo et al.
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Methanogens in the Antarctic Dry Valley permafrost
Tatiana A. Vishnivetskaya et al.
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Paula M. Tribelli et al.
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Jacqueline Goordial et al.
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metaSPAdes: a new versatile metagenomic assembler
Sergey Nurk et al.
GENOME RESEARCH (2017)
The growing tree of Archaea: new perspectives on their diversity, evolution and ecology
Panagiotis S. Adam et al.
ISME JOURNAL (2017)
Microbial survival strategies in ancient permafrost: insights from metagenomics
Rachel Mackelprang et al.
ISME JOURNAL (2017)
Bacteria primarily metabolize at the active layer/permafrost border in the peat core from a permafrost region in western Siberia
Y. N. Morgalev et al.
POLAR BIOLOGY (2017)
Improved genome recovery and integrated cell-size analyses of individual uncultured microbial cells and viral particles
Ramunas Stepanauskas et al.
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The development of permafrost bacterial communities under submarine conditions
Julia Mitzscherling et al.
JOURNAL OF GEOPHYSICAL RESEARCH-BIOGEOSCIENCES (2017)
A large-scale evaluation of algorithms to calculate average nucleotide identity
Seok-Hwan Yoon et al.
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY (2017)
Deep Yedoma permafrost: A synthesis of depositional characteristics and carbon vulnerability
Jens Strauss et al.
EARTH-SCIENCE REVIEWS (2017)
Interlaboratory quantification of Bacteria and Archaea in deeply buried sediments of the Baltic Sea (IODP Expedition 347)
Joy Buongiorno et al.
FEMS MICROBIOLOGY ECOLOGY (2017)
MaxBin 2.0: an automated binning algorithm to recover genomes from multiple metagenomic datasets
Yu-Wei Wu et al.
BIOINFORMATICS (2016)
Widespread permafrost vulnerability and soil active layer increases over the high northern latitudes inferred from satellite remote sensing and process model assessments
Hotaek Park et al.
REMOTE SENSING OF ENVIRONMENT (2016)
Metagenomics uncovers gaps in amplicon-based detection of microbial diversity
Emiley A. Eloe-Fadrosh et al.
NATURE MICROBIOLOGY (2016)
Metagenomic analyses of the late Pleistocene permafrost - additional tools for reconstruction of environmental conditions
Elizaveta Rivkina et al.
BIOGEOSCIENCES (2016)
Phylogenetic Characterization of Marine Benthic Archaea in Organic-Poor Sediments of the Eastern Equatorial Pacific Ocean (ODP Site 1225)
Antje Lauer et al.
MICROORGANISMS (2016)
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
Donovan H. Parks et al.
GENOME RESEARCH (2015)
Anvi'o: an advanced analysis and visualization platformfor 'omics data
A. Murat Eren et al.
PEERJ (2015)
Fast and sensitive protein alignment using DIAMOND
Benjamin Buchfink et al.
NATURE METHODS (2015)
Two Metagenomes from Late Pleistocene Northeast Siberian Permafrost
Kirill Krivushin et al.
GENOME ANNOUNCEMENTS (2015)
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger et al.
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Overcoming inefficient cellobiose fermentation by cellobiose phosphorylase in the presence of xylose
Kulika Chomvong et al.
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Phylogenomic reconstruction of archaeal fatty acid metabolism
Daria V. Dibrova et al.
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Bacterial genome replication at subzero temperatures in permafrost
Steven J. Tuorto et al.
ISME JOURNAL (2014)
The microbial ecology of permafrost
Janet K. Jansson et al.
NATURE REVIEWS MICROBIOLOGY (2014)
Global Patterns of Abundance, Diversity and Community Structure of the Aminicenantes (Candidate Phylum OP8)
Ibrahim F. Farag et al.
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Bacterial growth at-15 °C; molecular insights from the permafrost bacterium Planococcus halocryophilus Or1
Nadia C. S. Mykytczuk et al.
ISME JOURNAL (2013)
Insights into the phylogeny and coding potential of microbial dark matter
Christian Rinke et al.
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Predominant archaea in marine sediments degrade detrital proteins
Karen G. Lloyd et al.
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Growth of Carnobacterium spp. from permafrost under low pressure, temperature, and anoxic atmosphere has implications for Earth microbes on Mars
Wayne L. Nicholson et al.
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Quantitative colorimetric measurement of cellulose degradation under microbial culture conditions
Rembrandt J. F. Haft et al.
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Fast gapped-read alignment with Bowtie 2
Ben Langmead et al.
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IMG/M: the integrated metagenome data management and comparative analysis system
Victor M. Markowitz et al.
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Stratification of Archaea in the Deep Sediments of a Freshwater Meromictic Lake: Vertical Shift from Methanogenic to Uncultured Archaeal Lineages
Guillaume Borrel et al.
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Bacterial community structure and function change in association with colonizer plants during early primary succession in a glacier forefield
Joseph E. Knelman et al.
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Caloric restriction extends yeast chronological lifespan by altering a pattern of age-related changes in trehalose concentration
Pavlo Kyryakov et al.
FRONTIERS IN PHYSIOLOGY (2012)
Microbial diversity of active layer and permafrost in an acidic wetland from the Canadian High Arctic
Roland C. Wilhelm et al.
CANADIAN JOURNAL OF MICROBIOLOGY (2011)
Metagenomic analysis of a permafrost microbial community reveals a rapid response to thaw
Rachel Mackelprang et al.
NATURE (2011)
Sedimentary characteristics and origin of the Late Pleistocene Ice Complex on north-east Siberian Arctic coastal lowlands and islands - A review
L. Schirrmeister et al.
QUATERNARY INTERNATIONAL (2011)
The Genome Sequence of Psychrobacter arcticus 273-4, a Psychroactive Siberian Permafrost Bacterium, Reveals Mechanisms for Adaptation to Low-Temperature Growth
Hector L. Ayala-del-Rio et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2010)
Prodigal: prokaryotic gene recognition and translation initiation site identification
Doug Hyatt et al.
BMC BIOINFORMATICS (2010)
Biosynthesis of Isoprenoids: Crystal Structure of the [4Fe-4S] Cluster Protein IspG
Matthias Lee et al.
JOURNAL OF MOLECULAR BIOLOGY (2010)
Modern Tundra Landscapes of the Kolyma Lowland and their Evolution in the Holocene
Alexandra Veremeeva et al.
PERMAFROST AND PERIGLACIAL PROCESSES (2009)
Ancient bacteria show evidence of DNA repair
Sarah Stewart Johnson et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Characterization of the prokaryotic diversity in cold saline perennial springs of the Canadian high Arctic
Nancy N. Perreault et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)
A proteomic analysis of Psychrobacter articus 273-4 adaptation to low temperature and salinity using a 2-D liquid mapping approach
Suping Zheng et al.
ELECTROPHORESIS (2007)
Microbial Populations in Antarctic permafrost: Biodiversity, state, age, and implication for astrobiology
D. A. Gilichinsky et al.
ASTROBIOLOGY (2007)
Conservation of the metabolomic response to starvation across two divergent microbes
Matthew J. Brauer et al.
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Bacterial community in ancient Siberian permafrost as characterized by culture and culture-independent methods
Tatiana A. Vishnivetskaya et al.
ASTROBIOLOGY (2006)
Biodiversity of cryopegs in permafrost
D Gilichinsky et al.
FEMS MICROBIOLOGY ECOLOGY (2005)
Temperature dependence of metabolic rates for microbial growth, maintenance, and survival
PB Price et al.
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Isolation of nucleic acids and cultures from fossil ice and permafrost
E Willerslev et al.
TRENDS IN ECOLOGY & EVOLUTION (2004)
The structure of resting bacterial populations in soil and subsoil permafrost
VS Soina et al.
ASTROBIOLOGY (2004)
Geochemical and microbiological evidence for a hydrogen-based, hyperthermophilic subsurface lithoautotrophic microbial ecosystem (HyperSLiME) beneath an active deep-sea hydrothermal field
K Takai et al.
EXTREMOPHILES (2004)
Staphylococcus aureus mevalonate kinase: Isolation and characterization of an enzyme of the isoprenoid biosynthetic pathway
NE Voynova et al.
JOURNAL OF BACTERIOLOGY (2004)
Supercooled water brines within permafrost - An unknown ecological niche for microorganisms: A model for astrobiology
D Gilichinsky et al.
ASTROBIOLOGY (2003)
Phylogenetic analysis of anaerobic psychrophilic enrichment cultures obtained from a Greenland glacier ice core
PP Sheridan et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2003)
Biosynthesis of isoprenoids via mevalonate in archaea: The lost pathway
A Smit et al.
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Physiological roles of trehalose in bacteria and yeasts:: a comparative analysis
JC Argüelles
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Identification, evolution, and essentiality of the mevalonate pathway for isopentenyl diphosphate biosynthesis in gram-positive cocci
EI Wilding et al.
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Low-temperature recovery strategies for the isolation of bacteria from ancient permafrost sediments
T Vishnivetskaya et al.
EXTREMOPHILES (2000)
The COG database: a tool for genome-scale analysis of protein functions and evolution
RL Tatusov et al.
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