4.5 Article

Experimental evolution in morbidostat reveals converging genomic trajectories on the path to triclosan resistance

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Ecology

The omnistat: A flexible continuous-culture system for prolonged experimental evolution

David M. Ekkers et al.

METHODS IN ECOLOGY AND EVOLUTION (2020)

Article Multidisciplinary Sciences

Designing Automated, High-throughput, Continuous Cell Growth Experiments Using eVOLVER

Zachary J. Heins et al.

JOVE-JOURNAL OF VISUALIZED EXPERIMENTS (2019)

Article Biochemistry & Molecular Biology

Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center

Alice R. Wattam et al.

NUCLEIC ACIDS RESEARCH (2017)

Editorial Material Microbiology

Triclosan: an Instructive Tale

Patrick J. McNamara et al.

ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2016)

Article Biochemical Research Methods

Growthcurver: an R package for obtaining interpretable metrics from microbial growth curves

Kathleen Sprouffske et al.

BMC BIOINFORMATICS (2016)

Article Infectious Diseases

Parallel evolutionary pathways to antibiotic resistance selected by biocide exposure

Mark A. Webber et al.

JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2015)

Review Microbiology

The impact of triclosan on the spread of antibiotic resistance in the environment

Daniel E. Carey et al.

FRONTIERS IN MICROBIOLOGY (2015)

Article Multidisciplinary Sciences

A Small-Volume, Low-Cost, and Versatile Continuous Culture Device

Dominick Matteau et al.

PLOS ONE (2015)

Article Multidisciplinary Sciences

Dose-Response Analysis Using R

Christian Ritz et al.

PLOS ONE (2015)

Article Biochemical Research Methods

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony M. Bolger et al.

BIOINFORMATICS (2014)

Article Biotechnology & Applied Microbiology

The enduring utility of continuous culturing in experimental evolution

David Gresham et al.

GENOMICS (2014)

Article Biochemical Research Methods

Using Tablet for visual exploration of second-generation sequencing data

Iain Milne et al.

BRIEFINGS IN BIOINFORMATICS (2013)

Review Genetics & Heredity

Genome dynamics during experimental evolution

Jeffrey E. Barrick et al.

NATURE REVIEWS GENETICS (2013)

Article Biochemistry & Molecular Biology

Deactivation of the E. coli pH Stress Sensor CadC by Cadaverine

Ina Haneburger et al.

JOURNAL OF MOLECULAR BIOLOGY (2012)

Article Genetics & Heredity

Evolutionary paths to antibiotic resistance under dynamically sustained drug selection

Erdal Toprak et al.

NATURE GENETICS (2012)

Article Biochemistry & Molecular Biology

The Sequence Read Archive

Rasko Leinonen et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Biochemistry & Molecular Biology

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

Aaron McKenna et al.

GENOME RESEARCH (2010)

Article Biochemical Research Methods

The Sequence Alignment/Map format and SAMtools

Heng Li et al.

BIOINFORMATICS (2009)

Article Biochemical Research Methods

Fast and accurate short read alignment with Burrows-Wheeler transform

Heng Li et al.

BIOINFORMATICS (2009)

Article Biochemistry & Molecular Biology

ISfinder: the reference centre for bacterial insertion sequences

P. Siguier et al.

NUCLEIC ACIDS RESEARCH (2006)

Article Biochemistry & Molecular Biology

Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection

Tomoya Baba et al.

MOLECULAR SYSTEMS BIOLOGY (2006)

Article Biotechnology & Applied Microbiology

CadC-mediated activation of the cadBA promoter in Escherichia coli

C Kuper et al.

JOURNAL OF MOLECULAR MICROBIOLOGY AND BIOTECHNOLOGY (2005)

Article Biotechnology & Applied Microbiology

Triclosan-bacteria interactions: single or multiple target sites?

MG Escalada et al.

LETTERS IN APPLIED MICROBIOLOGY (2005)

Article Biotechnology & Applied Microbiology

Versatile and open software for comparing large genomes

S Kurtz et al.

GENOME BIOLOGY (2004)

Article Biochemistry & Molecular Biology

LrhA as a new transcriptional key regulator of flagella, motility and chemotaxis genes in Escherichia coli

D Lehnen et al.

MOLECULAR MICROBIOLOGY (2002)

Article Biochemistry & Molecular Biology

Membranotropic effects of the antibacterial agent triclosan

J Villalaín et al.

ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS (2001)