4.7 Article

A multiomics approach to identify host-microbe alterations associated with infection severity in diabetic foot infections: a pilot study

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Endocrinology & Metabolism

Guidelines on the diagnosis and treatment of foot infection in persons with diabetes (IWGDF 2019 update)

Benjamin A. Lipsky et al.

DIABETES-METABOLISM RESEARCH AND REVIEWS (2020)

Article Microbiology

Metatranscriptomic Analysis Reveals Active Bacterial Communities in Diabetic Foot Infections

Fatemah Sadeghpour Heravi et al.

FRONTIERS IN MICROBIOLOGY (2020)

Article Microbiology

SqueezeMeta, A Highly Portable, Fully Automatic Metagenomic Analysis Pipeline

Javier Tamames et al.

FRONTIERS IN MICROBIOLOGY (2019)

Review Genetics & Heredity

Advances and Challenges in Metatranscriptomic Analysis

Migun Shakya et al.

FRONTIERS IN GENETICS (2019)

Article Microbiology

Regulation of Staphylococcus aureus Virulence

Christian Jenul et al.

MICROBIOLOGY SPECTRUM (2019)

Article Biochemistry & Molecular Biology

The MetaCyc database of metabolic pathways and enzymes

Ron Caspi et al.

NUCLEIC ACIDS RESEARCH (2018)

Article Biochemistry & Molecular Biology

Selective substrate uptake: The role of ATP-binding cassette (ABC) importers in pathogenesis

Kari J. Tanaka et al.

BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES (2018)

Article Multidisciplinary Sciences

Staphylococcus aureus clumping factor A is a force-sensitive molecular switch that activates bacterial adhesion

Philippe Herman-Bausier et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)

Article Dermatology

Virulence Factor Genes in Staphylococcus aureus Isolated From Diabetic Foot Soft Tissue and Bone Infections

Gerardo Viquez-Molina et al.

INTERNATIONAL JOURNAL OF LOWER EXTREMITY WOUNDS (2018)

Article Biochemical Research Methods

Species-level functional profiling of metagenomes and metatranscriptomes

Eric A. Franzosa et al.

NATURE METHODS (2018)

Review Medicine, General & Internal

Diabetic Foot Ulcers and Their Recurrence

David G. Armstrong et al.

NEW ENGLAND JOURNAL OF MEDICINE (2017)

Article Immunology

The Host Cell Transcription Factor EGR1 Is Induced by Bacteria through the EGFR-ERK1/2 Pathway

Nele de Klerk et al.

FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY (2017)

Article Medicine, General & Internal

Next Generation DNA Sequencing of Tissues from Infected Diabetic Foot Ulcers

M. Malone et al.

EBIOMEDICINE (2017)

Article Multidisciplinary Sciences

BBMerge - Accurate paired shotgun read merging via overlap

Brian Bushnell et al.

PLOS ONE (2017)

Article Biochemistry & Molecular Biology

GenBank

Karen Clark et al.

NUCLEIC ACIDS RESEARCH (2016)

Editorial Material Biotechnology & Applied Microbiology

Survivability of Microbes in Natural Environments and Their Ecological Impacts

Shin Haruta et al.

MICROBES AND ENVIRONMENTS (2015)

Article Cardiac & Cardiovascular Systems

A critical role for Egr-1 during vascular remodelling in pulmonary arterial hypertension

Michael G. Dickinson et al.

CARDIOVASCULAR RESEARCH (2014)

Review Endocrinology & Metabolism

Diabetic foot infections: state-of-the-art

I. Uckay et al.

DIABETES OBESITY & METABOLISM (2014)

Article Biotechnology & Applied Microbiology

Relationship between Abundance and Specific Activity of Bacterioplankton in Open Ocean Surface Waters

Dana E. Hunt et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)

Article Biochemical Research Methods

STAR: ultrafast universal RNA-seq aligner

Alexander Dobin et al.

BIOINFORMATICS (2013)

Review Food Science & Technology

Staphylococcus aureus α-Toxin: Nearly a Century of Intrigue

Bryan J. Berube et al.

TOXINS (2013)

Review Geochemistry & Geophysics

The Rare Bacterial Biosphere

Carlos Pedros-Alio

ANNUAL REVIEW OF MARINE SCIENCE, VOL 4 (2012)

Article Biochemical Research Methods

Fast gapped-read alignment with Bowtie 2

Ben Langmead et al.

NATURE METHODS (2012)

Article Biochemical Research Methods

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

Bo Li et al.

BMC BIOINFORMATICS (2011)

Article Microbiology

HlyU Is a Positive Regulator of Hemolysin Expression in Vibrio anguillarum

Ling Li et al.

JOURNAL OF BACTERIOLOGY (2011)

Review Microbiology

Microbial seed banks: the ecological and evolutionary implications of dormancy

Jay T. Lennon et al.

NATURE REVIEWS MICROBIOLOGY (2011)

Article Multidisciplinary Sciences

Activity of abundant and rare bacteria in a coastal ocean

Barbara J. Campbell et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Biochemical Research Methods

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

Mark D. Robinson et al.

BIOINFORMATICS (2010)

Article Nursing

Clinical Signs of Infection in Diabetic Foot Ulcers With High Microbial Load

Sue E. Gardner et al.

BIOLOGICAL RESEARCH FOR NURSING (2009)

Review Biochemistry & Molecular Biology

Diabetic complications and dysregulated innate immunity

Dana T. Graves et al.

FRONTIERS IN BIOSCIENCE-LANDMARK (2008)

Article Microbiology

Bacteriology of moderate-to-severe diabetic foot infections and in vitro activity of antimicrobial agents

Diane M. Citron et al.

JOURNAL OF CLINICAL MICROBIOLOGY (2007)

Article Endocrinology & Metabolism

Risk factors for foot infections in individuals with diabetes

Lawrence A. Lavery et al.

DIABETES CARE (2006)

Article Biochemistry & Molecular Biology

KEGG: Kyoto Encyclopedia of Genes and Genomes

M Kanehisa et al.

NUCLEIC ACIDS RESEARCH (2000)