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Sipko van Dam et al.
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Rebecca Birnbaum et al.
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Andre Voigt et al.
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Differential activation of immune/inflammatory response-related co-expression modules in the hippocampus across the major psychiatric disorders
S. Kim et al.
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Yong Xu et al.
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J. Qin et al.
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Di Chen et al.
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Gene expression elucidates functional impact of polygenic risk for schizophrenia
Menachem Fromer et al.
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Jonathan L. Hess et al.
SCHIZOPHRENIA RESEARCH (2016)
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Hong Yue et al.
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Jingchun Chen et al.
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Co-expression network of neural-differentiation genes shows specific pattern in schizophrenia
Mariana Maschietto et al.
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M. S. Breen et al.
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Innate immune response is differentially dysregulated between bipolar disease and schizophrenia
Angelica de Baumont et al.
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CX3CR1 is dysregulated in blood and brain from schizophrenia patients
Aurelie Bergon et al.
SCHIZOPHRENIA RESEARCH (2015)
FastRFunctions for Robust Correlations and Hierarchical Clustering
Peter Langfelder et al.
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Z. Zhao et al.
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COXPRESdb in 2015: coexpression database for animal species by DNA-microarray and RNAseq-based expression data with multiple quality assessment systems
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Gene Sets Net Correlations Analysis (GSNCA): a multivariate differential coexpression test for gene sets
Yasir Rahmatallah et al.
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Pathway Analysis for Drug Repositioning Based on Public Database Mining
Yongmei Pan et al.
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Increased G protein-coupled receptor kinase (GRK) expression in the anterior cingulate cortex in schizophrenia
Adam J. Funk et al.
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Yongjun Fan et al.
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Meta-analysis of gene coexpression networks in the post-mortem prefrontal cortex of patients with schizophrenia and unaffected controls
Meeta Mistry et al.
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Two gene co-expression modules differentiate psychotics and controls
C. Chen et al.
MOLECULAR PSYCHIATRY (2013)
DCGL v2.0: An R Package for Unveiling Differential Regulation from Differential Co-expression
Jing Yang et al.
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RNA-Seq analysis implicates dysregulation of the immune system in schizophrenia
Junzhe Xu et al.
BMC GENOMICS (2012)
Differential network biology
Trey Ideker et al.
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Hongyu Diao et al.
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Link-based quantitative methods to identify differentially coexpressed genes and gene Pairs
Hui Yu et al.
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Pathway Commons, a web resource for biological pathway data
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Peter Langfelder et al.
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Chad A. Bousman et al.
AMERICAN JOURNAL OF MEDICAL GENETICS PART B-NEUROPSYCHIATRIC GENETICS (2010)
GOSemSim: an R package for measuring semantic similarity among GO terms and gene products
Guangchuang Yu et al.
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DISC1 regulates cell-cell adhesion, cell-matrix adhesion and neurite outgrowth
T. Hattori et al.
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Schizophrenia Gene Networks and Pathways and Their Applications for Novel Candidate Gene Selection
Jingchun Sun et al.
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Common variants conferring risk of schizophrenia: A pathway analysis of GWAS data
Peilin Jia et al.
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Statistical methods for gene set co-expression analysis
YounJeong Choi et al.
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Stephanie Woo et al.
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P. R. Maycox et al.
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ToppGene Suite for gene list enrichment analysis and candidate gene prioritization
Jing Chen et al.
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A global pathway crosstalk network
Yong Li et al.
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Reconstructing networks of pathways via significance analysis of their intersections
Mirko Francesconi et al.
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WGCNA: an R package for weighted correlation network analysis
Peter Langfelder et al.
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Molecular profiles of schizophrenia in the CNS at different stages of illness
Sujatha Narayan et al.
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FAK-MAPK-dependent adhesion disassembly downstream of L1 contributes to semaphorin3A-induced collapse
Ahmad Bechara et al.
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CoXpress: differential co-expression in gene expression data
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A global analysis of cross-talk in a mammalian cellular signalling network
Madhusudan Natarajan et al.
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Deficient hippocampal neuron expression of proteasome, ubiquitin, and mitochondrial genes in multiple schizophrenia cohorts
CA Altar et al.
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Altered expression of mitochondria-related genes in postmortem brains of patients with bipolar disorder or schizophrenia, as revealed by large-scale DNA microarray analysis
K Iwamoto et al.
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Finding disease specific alterations in the co-expression of genes
Dennis Kostka et al.
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