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Benjamin Carter et al.
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Peter J. Skene et al.
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Xiuli Bi et al.
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Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger et al.
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deepTools: a flexible platform for exploring deep-sequencing data
Fidel Ramirez et al.
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Boulos Chalhoub et al.
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Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position
Jason D. Buenrostro et al.
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Sven Heinz et al.
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Kerstin Kaufmann et al.
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The Sequence Alignment/Map format and SAMtools
Heng Li et al.
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Fast and accurate short read alignment with Burrows-Wheeler transform
Heng Li et al.
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Melissa J. Fullwood et al.
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Yong Zhang et al.
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David S. Johnson et al.
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