相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Dealing with water stress and microbial preservation
Maximino Manzanera
ENVIRONMENTAL MICROBIOLOGY (2021)
Temperate Forests Dominated by Arbuscular or Ectomycorrhizal Fungi Are Characterized by Strong Shifts from Saprotrophic to Mycorrhizal Fungi with Increasing Soil Depth
Alexis Carteron et al.
MICROBIAL ECOLOGY (2021)
The Effects of Soil Depth on the Structure of Microbial Communities in Agricultural Soils in Iowa (United States)
Jingjie Hao et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2021)
Steeper spatial scaling patterns of subsoil microbiota are shaped by deterministic assembly process
Xiongfeng Du et al.
MOLECULAR ECOLOGY (2021)
From the comfort zone to crown dieback: Sequence of physiological stress thresholds in mature European beech trees across progressive drought
Lorenz Walthert et al.
SCIENCE OF THE TOTAL ENVIRONMENT (2021)
Depth-Dependent Patterns of Bacterial Communities and Assembly Processes in a Typical Red Soil Critical Zone
Huayong Wu et al.
GEOMICROBIOLOGY JOURNAL (2020)
Co-occurring Fungal Functional Groups Respond Differently to Tree Neighborhoods and Soil Properties Across Three Tropical Rainforests in Panama
Tyler Schappe et al.
MICROBIAL ECOLOGY (2020)
Soil microbiomes and climate change
Janet K. Jansson et al.
NATURE REVIEWS MICROBIOLOGY (2020)
Vertical changes in bacterial community composition down to a depth of 20 m on the degraded Loess Plateau in China
Guiyao Liu et al.
LAND DEGRADATION & DEVELOPMENT (2020)
Pervasive shifts in forest dynamics in a changing world
Nate G. McDowell et al.
SCIENCE (2020)
Functional and Structural Responses of Arctic and Alpine Soil Prokaryotic and Fungal Communities Under Freeze-Thaw Cycles of Different Frequencies
Carla Perez-Mon et al.
FRONTIERS IN MICROBIOLOGY (2020)
Tamm Review: Deep fine roots in forest ecosystems: Why dig deeper?
Amandine Germon et al.
FOREST ECOLOGY AND MANAGEMENT (2020)
Temperature impacts community structure and function of phototrophic Chloroflexi and Cyanobacteria in two alkaline hot springs in Yellowstone National Park
Annastacia C. Bennett et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2020)
Strong shifts in microbial community structure are associated with increased litter input rather than temperature in High Arctic soils
Magdalene Adamczyk et al.
SOIL BIOLOGY & BIOCHEMISTRY (2020)
The Plastisphere of Biodegradable Plastics Is Characterized by Specific Microbial Taxa of Alpine and Arctic Soils
Joel Ruthi et al.
FRONTIERS IN ENVIRONMENTAL SCIENCE (2020)
Only Minor Changes in the Soil Microbiome of a Sub-alpine Forest After 20 Years of Moderately Increased Nitrogen Loads
Beat Frey et al.
FRONTIERS IN FORESTS AND GLOBAL CHANGE (2020)
Changes in Soil C:N:P Stoichiometry and Microbial Structure along Soil Depth in Two Forest Soils
Lei Hu et al.
FORESTS (2019)
Microbial succession on decomposing root litter in a drought-prone Scots pine forest
Claude Herzog et al.
ISME JOURNAL (2019)
A few Ascomycota taxa dominate soil fungal communities worldwide
Eleonora Egidi et al.
NATURE COMMUNICATIONS (2019)
The Soil Microbiome of GLORIA Mountain Summits in the Swiss Alps
Magdalene Adamczyk et al.
FRONTIERS IN MICROBIOLOGY (2019)
Soil Depth Determines the Composition and Diversity of Bacterial and Archaeal Communities in a Poplar Plantation
Huili Feng et al.
FORESTS (2019)
Ecological and Genomic Attributes of Novel Bacterial Taxa That Thrive in Subsurface Soil Horizons
Tess E. Brewer et al.
MBIO (2019)
How deep can ectomycorrhizas go? A case study on Pisolithus down to 4 meters in a Brazilian eucalypt plantation
Agnes Robin et al.
MYCORRHIZA (2019)
Plant roots increase both decomposition and stable organic matter formation in boreal forest soil
Bartosz Adamczyk et al.
NATURE COMMUNICATIONS (2019)
Subsoil microbial community responses to air exposure and legume growth depend on soil properties across different depths
Hongmei Yan et al.
SCIENTIFIC REPORTS (2019)
Floodplain soil and its bacterial composition are strongly affected by depth
Kristin Steger et al.
FEMS MICROBIOLOGY ECOLOGY (2019)
The known and the unknown in soil microbial ecology
Petr Baldrian
FEMS MICROBIOLOGY ECOLOGY (2019)
Changes in nitrogen-cycling microbial communities with depth in temperate and subtropical forest soils
Yuqian Tang et al.
APPLIED SOIL ECOLOGY (2018)
Life in Dry Soils: Effects of Drought on Soil Microbial Communities and Processes
Joshua P. Schimel
ANNUAL REVIEW OF ECOLOGY, EVOLUTION, AND SYSTEMATICS, VOL 49 (2018)
Spatial scaling of forest soil microbial communities across a temperature gradient
Ye Deng et al.
ENVIRONMENTAL MICROBIOLOGY (2018)
Equations to compensate for the temperature effect on readings from dielectric Decagon MPS-2 and MPS-6 water potential sensors in soils
Lorenz Walthert et al.
JOURNAL OF PLANT NUTRITION AND SOIL SCIENCE (2018)
Environment and host as large-scale controls of ectomycorrhizal fungi
Sietse van der Linde et al.
NATURE (2018)
Soil microbiomes with distinct assemblies through vertical soil profiles drive the cycling of multiple nutrients in reforested ecosystems
Shuo Jiao et al.
MICROBIOME (2018)
Variations in bacterial and fungal communities through soil depth profiles in a Betula albosinensis forest
Can Du et al.
JOURNAL OF MICROBIOLOGY (2017)
A decade of irrigation transforms the soil microbiome of a semi-arid pine forest
Martin Hartmann et al.
MOLECULAR ECOLOGY (2017)
Xerotolerant bacteria: surviving through a dry spell
Pedro H. Lebre et al.
NATURE REVIEWS MICROBIOLOGY (2017)
Embracing the unknown: disentangling the complexities of the soil microbiome
Noah Fierer
NATURE REVIEWS MICROBIOLOGY (2017)
Disentangling interactions between microbial communities and roots in deep subsoil
Martina I. Gocke et al.
SCIENCE OF THE TOTAL ENVIRONMENT (2017)
Depth-dependent influence of different land-use systems on bacterial biogeography
Brent J. Seuradge et al.
FEMS MICROBIOLOGY ECOLOGY (2017)
Revisiting the 'Gadgil effect': do interguild fungal interactions control carbon cycling in forest soils?
Christopher W. Fernandez et al.
NEW PHYTOLOGIST (2016)
Greenhouse gas emissions from soils A review
Cornelius Oertel et al.
CHEMIE DER ERDE-GEOCHEMISTRY (2016)
Redefining common endophytes and plant pathogens in Neofabraea, Pezicula, and related genera
Chen Chen et al.
FUNGAL BIOLOGY (2016)
FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild
Nhu H. Nguyen et al.
FUNGAL ECOLOGY (2016)
Potential sources of microbial colonizers in an initial soil ecosystem after retreat of an alpine glacier
Thomas Rime et al.
ISME JOURNAL (2016)
Mammalian engineers drive soil microbial communities and ecosystem functions across a disturbance gradient
David J. Eldridge et al.
JOURNAL OF ANIMAL ECOLOGY (2016)
Microbial carbon use efficiency and biomass turnover times depending on soil depth - Implications for carbon cycling
Marie Spohn et al.
SOIL BIOLOGY & BIOCHEMISTRY (2016)
Record dry summer in 2015 challenges precipitation projections in Central Europe
Rene Orth et al.
SCIENTIFIC REPORTS (2016)
Divergent habitat filtering of root and soil fungal communities in temperate beech forests
Kezia Goldmann et al.
SCIENTIFIC REPORTS (2016)
Microbial diversity in European alpine permafrost and active layers
Beat Frey et al.
FEMS MICROBIOLOGY ECOLOGY (2016)
Error filtering, pair assembly and error correction for next-generation sequencing reads
Robert C. Edgar et al.
BIOINFORMATICS (2015)
Compartmentalized and contrasted response of ectomycorrhizal and soil fungal communities of Scots pine forests along elevation gradients in France and Spain
Ana Rincon et al.
ENVIRONMENTAL MICROBIOLOGY (2015)
Desert grassland responses to climate and soil moisture suggest divergent vulnerabilities across the southwestern United States
Jennifer R. Gremer et al.
GLOBAL CHANGE BIOLOGY (2015)
Vertical distribution of the soil microbiota along a successional gradient in a glacier forefield
Thomas Rime et al.
MOLECULAR ECOLOGY (2015)
Composition of fungal and bacterial communities in forest litter and soil is largely determined by dominant trees
Michaela Urbanova et al.
SOIL BIOLOGY & BIOCHEMISTRY (2015)
Bacterial and archaeal communities in long-term contaminated surface and subsurface soil evaluated through coextracted RNA and DNA
Anu Mikkonen et al.
FEMS MICROBIOLOGY ECOLOGY (2014)
Invariant soil water potential at zero microbial respiration explained by hydrological discontinuity in dry soils
S. Manzoni et al.
GEOPHYSICAL RESEARCH LETTERS (2014)
Still scratching the surface: how much of the 'black box' of soil ectomycorrhizal communities remains in the dark?
Brian J. Pickles et al.
NEW PHYTOLOGIST (2014)
Phylogenetic assessment of Chaetomium indicum and allied species, with the introduction of three new species and epitypification of C. funicola and C. indicum
Xue-Wei Wang et al.
MYCOLOGICAL PROGRESS (2014)
Belowground biodiversity and ecosystem functioning
Richard D. Bardgett et al.
NATURE (2014)
Anhydrobiosis: an unsolved problem
John H. Crowe
PLANT CELL AND ENVIRONMENT (2014)
Ammonia-oxidizing archaea use the most energy-efficient aerobic pathway for CO2 fixation
Martin Koenneke et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Change in deep soil microbial communities due to long-term fertilization
Chenhua Li et al.
SOIL BIOLOGY & BIOCHEMISTRY (2014)
Interactions between methane and the nitrogen cycle in light of climate change
Paul L. E. Bodelier et al.
CURRENT OPINION IN ENVIRONMENTAL SUSTAINABILITY (2014)
Microbial regulation of global biogeochemical cycles
Johannes Rousk et al.
FRONTIERS IN MICROBIOLOGY (2014)
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Michael I. Love et al.
GENOME BIOLOGY (2014)
The influence of pH on pigment formation by lignicolous fungi
Daniela Tudor et al.
INTERNATIONAL BIODETERIORATION & BIODEGRADATION (2013)
Anaerobic oxidation of methane coupled to nitrate reduction in a novel archaeal lineage
Mohamed F. Haroon et al.
NATURE (2013)
UPARSE: highly accurate OTU sequences from microbial amplicon reads
Robert C. Edgar
NATURE METHODS (2013)
Practical innovations for high-throughput amplicon sequencing
Derek S. Lundberg et al.
NATURE METHODS (2013)
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
Christian Quast et al.
NUCLEIC ACIDS RESEARCH (2013)
phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
Paul J. McMurdie et al.
PLOS ONE (2013)
Climate change may cause severe loss in the economic value of European forest land
Marc Hanewinkel et al.
NATURE CLIMATE CHANGE (2013)
How to study deep roots - and why it matters
Jean-Luc Maeght et al.
FRONTIERS IN PLANT SCIENCE (2013)
Micro-scale determinants of bacterial diversity in soil
Michiel Vos et al.
FEMS MICROBIOLOGY REVIEWS (2013)
Vertical stratification of subsurface microbial community composition across geological formations at the Hanford Site
Xueju Lin et al.
ENVIRONMENTAL MICROBIOLOGY (2012)
Two new species of Hydnum with ovoid basidiospores: H. ovoideisporum and H. vesterholtii
Ibai Olariaga et al.
MYCOLOGIA (2012)
Digging deeper to find unique microbial communities: The strong effect of depth on the structure of bacterial and archaeal communities in soil
Kathryn G. Eilers et al.
SOIL BIOLOGY & BIOCHEMISTRY (2012)
Heavy-Machinery Traffic Impacts Methane Emissions as Well as Methanogen Abundance and Community Structure in Oxic Forest Soils
Beat Frey et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)
Global Biogeography and Quantitative Seasonal Dynamics of Gemmatimonadetes in Soil
Jennifer M. DeBruyn et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)
Deep soil organic matter-a key but poorly understood component of terrestrial C cycle
Cornelia Rumpel et al.
PLANT AND SOIL (2011)
Horizon-Specific Bacterial Community Composition of German Grassland Soils, as Revealed by Pyrosequencing-Based Analysis of 16S rRNA Genes
Christiane Will et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2010)
Search and clustering orders of magnitude faster than BLAST
Robert C. Edgar
BIOINFORMATICS (2010)
Soil bacterial and fungal communities across a pH gradient in an arable soil
Johannes Rousk et al.
ISME JOURNAL (2010)
Determination of organic and inorganic carbon, delta C-13, and nitrogen in soils containing carbonates after acid fumigation with HCI
Lorenz Walthert et al.
JOURNAL OF PLANT NUTRITION AND SOIL SCIENCE (2010)
Changes in bacterial and archaeal community structure and functional diversity along a geochemically variable soil profile
Colleen M. Hansel et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)
Belowground drought response of European beech: fine root biomass and carbon partitioning in 14 mature stands across a precipitation gradient
Ina C. Meier et al.
GLOBAL CHANGE BIOLOGY (2008)
Stability of organic carbon in deep soil layers controlled by fresh carbon supply
Sebastien Fontaine et al.
NATURE (2007)
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
Qiong Wang et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)
Toward an ecological classification of soil bacteria
Noah Fierer et al.
ECOLOGY (2007)
Novel genes for nitrite reductase and Amo-related proteins indicate a role of uncultivated mesophilic crenarchaeota in nitrogen cycling
AH Treusch et al.
ENVIRONMENTAL MICROBIOLOGY (2005)
Is soil carbon mostly root carbon? Mechanisms for a specific stabilisation
DP Rasse et al.
PLANT AND SOIL (2005)
Morphological and ecophysiological variation of the hybrid oak Quercus subpyrenaica (Q-faginea x Q-pubescens)
H Himrane et al.
TREES-STRUCTURE AND FUNCTION (2004)
Nitrate reduction and the nitrogen cycle in archaea
P Cabello et al.
MICROBIOLOGY-SGM (2004)
Estimating water retention curves of forest soils from soil texture and bulk density
R Teepe et al.
JOURNAL OF PLANT NUTRITION AND SOIL SCIENCE (2003)
Variations in microbial community composition through two soil depth profiles
N Fierer et al.
SOIL BIOLOGY & BIOCHEMISTRY (2003)
Empirical and theoretical bacterial diversity in four Arizona soils
J Dunbar et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2002)
Roseiflexus castenholzii gen. nov., sp nov., a thermophilic, filamentous, photosynthetic bacterium that lacks chlorosomes
S Hanada et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2002)
分享论文
