4.8 Article

Decrypting bacterial polyphenol metabolism in an anoxic wetland soil

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Environmental Sciences

Woody litter protects peat carbon stocks during drought

Nathalie Fenner et al.

NATURE CLIMATE CHANGE (2020)

Article Biochemistry & Molecular Biology

DRAM for distilling microbial metabolism to automate the curation of microbiome function

Michael Shaffer et al.

NUCLEIC ACIDS RESEARCH (2020)

Article Multidisciplinary Sciences

Integration of time-series meta-omics data reveals how microbial ecosystems respond to disturbance

Malte Herold et al.

NATURE COMMUNICATIONS (2020)

Article Agriculture, Multidisciplinary

Proanthocyanidin Structural Details Revealed by Ultrahigh Resolution FT-ICR MALDI-Mass Spectrometry, 1H-13C HSQC NMR, and Thiolysis-HPLC-DAD

Savanah G. Reeves et al.

JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY (2020)

Article Environmental Sciences

Priming effects of soil organic matter decomposition with addition of different carbon substrates

Zhiyuan Zhang et al.

JOURNAL OF SOILS AND SEDIMENTS (2019)

Review Biochemical Research Methods

Advances in microbial lignin degradation and its applications

Naofumi Kamimura et al.

CURRENT OPINION IN BIOTECHNOLOGY (2019)

Article Multidisciplinary Sciences

Discovery and inhibition of an interspecies gut bacterial pathway for Levodopa metabolism

Vayu Maini Rekdal et al.

SCIENCE (2019)

Article Biotechnology & Applied Microbiology

An NADH-Dependent Reductase from Eubacterium ramulus Catalyzes the Stereospecific Heteroring Cleavage of Flavanones and Flavanonols

Annett Braune et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2019)

Article Biochemical Research Methods

The Kendrick analysis for polymer mass spectrometry

Thierry N. J. Fouquet

JOURNAL OF MASS SPECTROMETRY (2019)

Article Multidisciplinary Sciences

A shared core microbiome in soda lakes separated by large distances

Jackie K. Zorz et al.

NATURE COMMUNICATIONS (2019)

Article Biochemistry & Molecular Biology

The PRIDE database and related tools and resources in 2019: improving support for quantification data

Yasset Perez-Riverol et al.

NUCLEIC ACIDS RESEARCH (2019)

Article Environmental Sciences

Unraveling the Importance of Polyphenols for Microbial Carbon Mineralization in Rewetted Riparian Peatlands

Dominik Zak et al.

FRONTIERS IN ENVIRONMENTAL SCIENCE (2019)

Article Psychology, Multidisciplinary

Patients With Obsessive-Compulsive Disorder Exhibit Deficits in Consummatory but Not Anticipatory Pleasure

Sihui Li et al.

FRONTIERS IN PSYCHOLOGY (2019)

Article Biochemistry & Molecular Biology

Kinetics of H2O2-driven degradation of chitin by a bacterial lytic polysaccharide monooxygenase

Silja Kuusk et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2018)

Review Food Science & Technology

The Bioavailability, Transport, and Bioactivity of Dietary Flavonoids: A Review from a Historical Perspective

Gary Williamson et al.

COMPREHENSIVE REVIEWS IN FOOD SCIENCE AND FOOD SAFETY (2018)

Article Biochemical Research Methods

On the Kendrick Mass Defect Plots of Multiply Charged Polymer Ions: Splits, Misalignments, and How to Correct Them

Thierry N. J. Fouquet et al.

JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY (2018)

Article Multidisciplinary Sciences

Coupled laboratory and field investigations resolve microbial interactions that underpin persistence in hydraulically fractured shales

Mikayla A. Borton et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)

Article Multidisciplinary Sciences

Linking soil biology and chemistry in biological soil crust using isolate exometabolomics

Tami L. Swenson et al.

NATURE COMMUNICATIONS (2018)

Article Multidisciplinary Sciences

Genome-centric view of carbon processing in thawing permafrost

Ben J. Woodcroft et al.

NATURE (2018)

Review Pharmacology & Pharmacy

Proanthocyanidins and hydrolysable tannins: occurrence, dietary intake and pharmacological effects

Antonella Smeriglio et al.

BRITISH JOURNAL OF PHARMACOLOGY (2017)

Article Ecology

Strategies to improve reference databases for soil microbiomes

Jinlyung Choi et al.

ISME JOURNAL (2017)

Article Biotechnology & Applied Microbiology

Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

Robert M. Bowers et al.

NATURE BIOTECHNOLOGY (2017)

Review Microbiology

Embracing the unknown: disentangling the complexities of the soil microbiome

Noah Fierer

NATURE REVIEWS MICROBIOLOGY (2017)

Article Multidisciplinary Sciences

Methanogenesis in oxygenated soils is a substantial fraction of wetland methane emissions

Jordan C. Angle et al.

NATURE COMMUNICATIONS (2017)

Article Multidisciplinary Sciences

Hydrological legacy determines the type of enzyme inhibition in a peatlands chronosequence

Samuel Alexander Festing Bonnett et al.

SCIENTIFIC REPORTS (2017)

Review Microbiology

Lignin degradation: microorganisms, enzymes involved, genomes analysis and evolution

Grzegorz Janusz et al.

FEMS MICROBIOLOGY REVIEWS (2017)

Review Nutrition & Dietetics

The role of polyphenols in modern nutrition

G. Williamson

NUTRITION BULLETIN (2017)

Article Microbiology

Chalcone Isomerase from Eubacterium ramulus Catalyzes the Ring Contraction of Flavanonols

Annett Braune et al.

JOURNAL OF BACTERIOLOGY (2016)

Article Biochemical Research Methods

DADA2: High-resolution sample inference from Illumina amplicon data

Benjamin J. Callahan et al.

NATURE METHODS (2016)

Article Multidisciplinary Sciences

Visualizing in situ translational activity for identifying and sorting slow-growing archaeal-bacterial consortia

Roland Hatzenpichler et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)

Article Soil Science

Temperature the dominant control on the enzyme-latch across a range of temperate peatland types

Andrew J. Pinsonneault et al.

SOIL BIOLOGY & BIOCHEMISTRY (2016)

Review Gastroenterology & Hepatology

Bacterial species involved in the conversion of dietary flavonoids in the human gut

Annett Braune et al.

GUT MICROBES (2016)

Article Biochemistry & Molecular Biology

CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

Donovan H. Parks et al.

GENOME RESEARCH (2015)

Article Multidisciplinary Sciences

Multi-omics of permafrost, active layer and thermokarst bog soil microbiomes

Jenni Hultman et al.

NATURE (2015)

Article Biochemical Research Methods

The Phyre2 web portal for protein modeling, prediction and analysis

Lawrence A. Kelley et al.

NATURE PROTOCOLS (2015)

Article Biochemistry & Molecular Biology

Analysis of Metabolomics Datasets with High-Performance Computing and Metabolite Atlases

Yushu Yao et al.

METABOLITES (2015)

Article Biochemical Research Methods

Structural Characterization of Polymers by MALDI Spiral-TOF Mass Spectrometry Combined with Kendrick Mass Defect Analysis

Hiroaki Sato et al.

JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY (2014)

Article Multidisciplinary Sciences

Metaproteomics reveals differential modes of metabolic coupling among ubiquitous oxygen minimum zone microbes

Alyse K. Hawley et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Review Nutrition & Dietetics

Resources and Biological Activities of Natural Polyphenols

An-Na Li et al.

NUTRIENTS (2014)

Review Biochemistry & Molecular Biology

The role of L-DOPA in plants

Anderson Ricardo Soares et al.

PLANT SIGNALING & BEHAVIOR (2014)

Article Chemistry, Analytical

The Folin-Ciocalteu assay revisited: improvement of its specificity for total phenolic content determination

Juan Carlos Sanchez-Rangel et al.

ANALYTICAL METHODS (2013)

Article Plant Sciences

Soil microbial communities respond differently to three chemically defined polyphenols

Michael A. Schmidt et al.

PLANT PHYSIOLOGY AND BIOCHEMISTRY (2013)

Article Soil Science

Micrometer-scale physical structure and microbial composition of soil macroaggregates

Vanessa L. Bailey et al.

SOIL BIOLOGY & BIOCHEMISTRY (2013)

Article Microbiology

Evidence supporting dissimilatory and assimilatory lignin degradation in Enterobacter lignolyticus SCF1

Kristen M. DeAngelis et al.

FRONTIERS IN MICROBIOLOGY (2013)

Article Biochemical Research Methods

Phylogenomic analysis of bacterial and archaeal sequences with AMPHORA2

Martin Wu et al.

BIOINFORMATICS (2012)

Article Biotechnology & Applied Microbiology

Indolepyruvate ferredoxin oxidoreductase: An oxygen-sensitive iron-sulfur enzyme from the hyperthermophilic archaeon Thermococcus profundus

Yukiko Ozawa et al.

JOURNAL OF BIOSCIENCE AND BIOENGINEERING (2012)

Review Chemistry, Multidisciplinary

Plant Polyphenols: Chemical Properties, Biological Activities, and Synthesis

Stephane Quideau et al.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2011)

Article Geosciences, Multidisciplinary

Drought-induced carbon loss in peatlands

Nathalie Fenner et al.

NATURE GEOSCIENCE (2011)

Article Agriculture, Multidisciplinary

Thorough Study of Reactivity of Various Compound Classes toward the Folin-Ciocalteu Reagent

Jace D. Everette et al.

JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY (2010)

Article Biochemistry & Molecular Biology

Preparation of an Acid Butanol Standard from Fresh Apples

Chunmei Li et al.

JOURNAL OF CHEMICAL ECOLOGY (2010)

Article Biochemical Research Methods

Dealing with the Unknown: Metabolomics and Metabolite Atlases

Benjamin P. Bowen et al.

JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY (2010)

Article Biochemical Research Methods

The Sequence Alignment/Map format and SAMtools

Heng Li et al.

BIOINFORMATICS (2009)

Review Microbiology

Anaerobic Catabolism of Aromatic Compounds: a Genetic and Genomic View

Manuel Carmona et al.

MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2009)

Article Biotechnology & Applied Microbiology

The BaeSR two-component regulatory system mediates resistance to condensed tannins in Escherichia coli

Erwin G. Zoetendal et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)

Article Biotechnology & Applied Microbiology

Regulation of caffeate respiration in the acetogenic bacterium Acetobacterium woodii

Sabrina Dilling et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)

Article Microbiology

Graphite electrodes as electron donors for anaerobic respiration

KB Gregory et al.

ENVIRONMENTAL MICROBIOLOGY (2004)

Article Biotechnology & Applied Microbiology

Cloning and expression of a phloretin hydrolase gene from Eubacterium ramulus and characterization of the recombinant enzyme

L Schoefer et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2004)

Review Agronomy

Tannins in nutrient dynamics of forest ecosystems - a review

TEC Kraus et al.

PLANT AND SOIL (2003)

Review Ecology

The role of polyphenols in terrestrial ecosystem nutrient cycling

S Hättenschwiler et al.

TRENDS IN ECOLOGY & EVOLUTION (2000)