相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Molecular Co-occupancy Identifies Transcription Factor Binding Cooperativity In Vivo
Can Soenmezer et al.
MOLECULAR CELL (2021)
A high-resolution protein architecture of the budding yeast genome
Matthew J. Rossi et al.
NATURE (2021)
Base-resolution models of transcription-factor binding reveal soft motif syntax
Ziga Avsec et al.
NATURE GENETICS (2021)
Targeted nanopore sequencing with Cas9-guided adapter ligation
Timothy Gilpatrick et al.
NATURE BIOTECHNOLOGY (2020)
Long-range single-molecule mapping of chromatin accessibility in eukaryotes
Zohar Shipony et al.
NATURE METHODS (2020)
Expanded encyclopaedias of DNA elements in the human and mouse genomes
Jill E. Moore et al.
NATURE (2020)
Single-molecule regulatory architectures captured by chromatin fiber sequencing
Andrew B. Stergachis et al.
SCIENCE (2020)
Multi-contact 3C reveals that the human genome during interphase is largely not entangled
Filipe Tavares-Cadete et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2020)
Simultaneous profiling of chromatin accessibility and methylation on human cell lines with nanopore sequencing
Isac Lee et al.
NATURE METHODS (2020)
Massively multiplex single-molecule oligonucleosome footprinting
Nour J. Abdulhay et al.
ELIFE (2020)
Seven myths of how transcription factors read the cis-regulatory code
Julia Zeitlinger
CURRENT OPINION IN SYSTEMS BIOLOGY (2020)
Multiplex chromatin interactions with single-molecule precision
Meizhen Zheng et al.
NATURE (2019)
Single-Molecule Nanoscopy Elucidates RNA Polymerase II Transcription at Single Genes in Live Cells
Jieru Li et al.
CELL (2019)
Joint profiling of DNA methylation and chromatin architecture in single cells
Guoqiang Li et al.
NATURE METHODS (2019)
Absolute nucleosome occupancy map for the Saccharomyces cerevisiae genome
Elisa Oberbeckmann et al.
GENOME RESEARCH (2019)
EpiMethylTag: simultaneous detection of ATAC-seq or ChIP-seq signals with DNA methylation
Priscillia Lhoumaud et al.
GENOME BIOLOGY (2019)
Higher-Order Inter-chromosomal Hubs Shape 3D Genome Organization in the Nucleus
Sofia A. Quinodoz et al.
CELL (2018)
The Human Transcription Factors
Samuel A. Lambert et al.
CELL (2018)
Visualizing transcription factor dynamics in living cells
Zhe Liu et al.
JOURNAL OF CELL BIOLOGY (2018)
scNMT-seq enables joint profiling of chromatin accessibility DNA methylation and transcription in single cells
Stephen J. Clark et al.
NATURE COMMUNICATIONS (2018)
Principles of nucleosome organization revealed by single-cell micrococcal nuclease sequencing
Binbin Lai et al.
NATURE (2018)
Transcription Factors Activate Genes through the Phase-Separation Capacity of Their Activation Domains
Ann Boija et al.
CELL (2018)
Systematic Investigation of Transcription Factor Activity in the Context of Chromatin Using Massively Parallel Binding and Expression Assays
Michal Levo et al.
MOLECULAR CELL (2017)
Genome-wide Single-Molecule Footprinting Reveals High RNA Polymerase II Turnover at Paused Promoters
Arnaud R. Krebs et al.
MOLECULAR CELL (2017)
Dynamic chromatin technologies: from individual molecules to epigenomic regulation in cells
Olivier Cuvier et al.
NATURE REVIEWS GENETICS (2017)
Nuclear microenvironments modulate transcription from low-affinity enhancers
Albert Tsai et al.
ELIFE (2017)
Single-cell multi-omics sequencing of mouse early embryos and embryonic stem cells
Fan Guo et al.
CELL RESEARCH (2017)
Combinatorial function of transcription factors and cofactors
Franziska Reiter et al.
CURRENT OPINION IN GENETICS & DEVELOPMENT (2017)
The Genetics of Transcription Factor DNA Binding Variation
Bart Deplancke et al.
CELL (2016)
Capturing pairwise and multi-way chromosomal conformations using chromosomal walks
Pedro Olivares-Chauvet et al.
NATURE (2016)
Decoding enhancers using massively parallel reporter assays
Fumitaka Inoue et al.
GENOMICS (2015)
Genome-wide detection of DNase I hypersensitive sites in single cells and FFPE tissue samples
Wenfei Jin et al.
NATURE (2015)
Single-cell chromatin accessibility reveals principles of regulatory variation
Jason D. Buenostro et al.
NATURE (2015)
Multiplex single-cell profiling of chromatin accessibility by combinatorial cellular indexing
Darren A. Cusanovich et al.
SCIENCE (2015)
Single-Molecule Dynamics of Enhanceosome Assembly in Embryonic Stem Cells
Jiji Chen et al.
CELL (2014)
Multiplex mapping of chromatin accessibility and DNA methylation within targeted single molecules identifies epigenetic heterogeneity in neural stem cells and glioblastoma
Nancy H. Nabilsi et al.
GENOME RESEARCH (2014)
DNase Footprint Signatures Are Dictated by Factor Dynamics and DNA Sequence
Myong-Hee Sung et al.
MOLECULAR CELL (2014)
Dynamic and static maintenance of epigenetic memory in pluripotent and somatic cells
Zohar Shipony et al.
NATURE (2014)
Transcription Factor Occupancy Can Mediate Active Turnover of DNA Methylation at Regulatory Regions
Angelika Feldmann et al.
PLOS GENETICS (2013)
Genome-wide mapping of nucleosome positioning and DNA methylation within individual DNA molecules
Theresa K. Kelly et al.
GENOME RESEARCH (2012)
Epigenetic polymorphism and the stochastic formation of differentially methylated regions in normal and cancerous tissues
Gilad Landan et al.
NATURE GENETICS (2012)
Transcription factors: from enhancer binding to developmental control
Francois Spitz et al.
NATURE REVIEWS GENETICS (2012)
Animal Transcription Networks as Highly Connected, Quantitative Continua
Mark D. Biggin
DEVELOPMENTAL CELL (2011)
Mammalian Genes Are Transcribed with Widely Different Bursting Kinetics
David M. Suter et al.
SCIENCE (2011)
Constitutive nucleosome depletion and ordered factor assembly at the GRP78 promoter revealed by single molecule footprinting
Einav Nili Gal-Yam et al.
PLOS GENETICS (2006)