相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Association Study of the 5′UTR Intron of the FAD2-2 Gene With Oleic and Linoleic Acid Content in Olea europaea L.
Amelia Salimonti et al.
FRONTIERS IN PLANT SCIENCE (2020)
Arabidopsis FHY3 and FAR1 integrate light and strigolactone signaling to regulate branching
Yurong Xie et al.
NATURE COMMUNICATIONS (2020)
Integrated metabolomics and transcriptome analysis on flavonoid biosynthesis in safflower (Carthamus tinctorius L.) under MeJA treatment
Jiang Chen et al.
BMC PLANT BIOLOGY (2020)
CtACO1 Overexpression Resulted in the Alteration of the Flavonoids Profile of Safflower
Yanhua Tu et al.
MOLECULES (2019)
A global coexpression network of soybean genes gives insights into the evolution of nodulation in nonlegumes and legumes
Zhihua Wu et al.
NEW PHYTOLOGIST (2019)
Transcriptome assembly from long-read RNA-seq alignments with StringTie2
Sam Kovaka et al.
GENOME BIOLOGY (2019)
Minimap2: pairwise alignment for nucleotide sequences
Heng Li
BIOINFORMATICS (2018)
MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms
Sudhir Kumar et al.
MOLECULAR BIOLOGY AND EVOLUTION (2018)
Trehalose Contributes to Gamma-Linolenic Acid Accumulation in Cunninghamella echinulata Based on de Novo Transcriptomic and Lipidomic Analyses
Shue Li et al.
FRONTIERS IN MICROBIOLOGY (2018)
Full-length transcriptome sequences and the identification of putative genes for flavonoid biosynthesis in safflower
Jiang Chen et al.
BMC GENOMICS (2018)
Alternative Splicing Plays a Critical Role in Maintaining Mineral Nutrient Homeostasis in Rice (Oryza sativa)
Chunlan Dong et al.
PLANT CELL (2018)
Trehalose 6-Phosphate Positively Regulates Fatty Acid Synthesis by Stabilizing WRINKLED1
Zhiyang Zhai et al.
PLANT CELL (2018)
SUPPA2: fast, accurate, and uncertainty-aware differential splicing analysis across multiple conditions
Juan L. Trincado et al.
GENOME BIOLOGY (2018)
Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation
Sergey Koren et al.
GENOME RESEARCH (2017)
Fast Genome-Wide Functional Annotation through Orthology Assignment by eggNOG-Mapper
Jaime Huerta-Cepas et al.
MOLECULAR BIOLOGY AND EVOLUTION (2017)
The sunflower genome provides insights into oil metabolism, flowering and Asterid evolution
Helene Badouin et al.
NATURE (2017)
Reconstructing the genome of the most recent common ancestor of flowering plants
Florent Murat et al.
NATURE GENETICS (2017)
Alternative splicing as a regulator of development and tissue identity
Francisco E. Baralle et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2017)
Overexpression of CtCHS1 Increases Accumulation of Quinochalcone in Safflower
Dandan Guo et al.
FRONTIERS IN PLANT SCIENCE (2017)
Salt and drought stresses in safflower: a review
M. Iftikhar Hussain et al.
AGRONOMY FOR SUSTAINABLE DEVELOPMENT (2016)
Genome puzzle master (GPM): an integrated pipeline for building and editing pseudomolecules from fragmented sequences
Jianwei Zhang et al.
BIOINFORMATICS (2016)
Soybean Seed Development: Fatty Acid and Phytohormone Metabolism and Their Interactions
Quoc Thien Nguyen et al.
CURRENT GENOMICS (2016)
iTAK: A Program for Genome-wide Prediction and Classification of Plant Transcription Factors, Transcriptional Regulators, and Protein Kinases
Yi Zheng et al.
MOLECULAR PLANT (2016)
Phased diploid genome assembly with single-molecule real-time sequencing
Chen-Shan Chin et al.
NATURE METHODS (2016)
Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown
Mihaela Pertea et al.
NATURE PROTOCOLS (2016)
Evolution of Gene Duplication in Plants
Nicholas Panchy et al.
PLANT PHYSIOLOGY (2016)
Genetic Mapping of Millions of SNPs in Safflower (Carthamus tinctorius L.) via Whole-Genome Resequencing
John E. Bowers et al.
G3-GENES GENOMES GENETICS (2016)
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
Felipe A. Simao et al.
BIOINFORMATICS (2015)
Early evolution of the angiosperm clade Asteraceae in the Cretaceous of Antarctica
Viviana D. Barreda et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Multifaceted roles of FHY3 and FAR1 in light signaling and beyond
Hai Wang et al.
TRENDS IN PLANT SCIENCE (2015)
ALLMAPS: robust scaffold ordering based on multiple maps
Haibao Tang et al.
GENOME BIOLOGY (2015)
Fast and sensitive protein alignment using DIAMOND
Benjamin Buchfink et al.
NATURE METHODS (2015)
OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy
David M. Emms et al.
GENOME BIOLOGY (2015)
QTL IciMapping: Integrated software for genetic linkage map construction and quantitative trait locus mapping in biparental populations
Lei Meng et al.
CROP JOURNAL (2015)
LoRDEC: accurate and efficient long read error correction
Leena Salmela et al.
BIOINFORMATICS (2014)
proovread: large-scale high-accuracy PacBio correction through iterative short read consensus
Thomas Hackl et al.
BIOINFORMATICS (2014)
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger et al.
BIOINFORMATICS (2014)
InterProScan 5: genome-scale protein function classification
Philip Jones et al.
BIOINFORMATICS (2014)
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
Alexandros Stamatakis
BIOINFORMATICS (2014)
Identification and annotation of small RNA genes using ShortStack
Saima Shahid et al.
METHODS (2014)
Overexpression of stearoyl-ACP desaturase enhances accumulations of oleic acid in the green alga Chlamydomonas reinhardtii
Kwon Hwangbo et al.
PLANT BIOTECHNOLOGY REPORTS (2014)
Pilon: An Integrated Tool for Comprehensive Microbial Variant Detection and Genome Assembly Improvement
Bruce J. Walker et al.
PLOS ONE (2014)
GSK3-like kinases positively modulate abscisic acid signaling through phosphorylating subgroup III SnRK2s in Arabidopsis
Zhenying Cai et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Genomic Signatures of Specialized Metabolism in Plants
Lee Chae et al.
SCIENCE (2014)
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Michael I. Love et al.
GENOME BIOLOGY (2014)
STAR: ultrafast universal RNA-seq aligner
Alexander Dobin et al.
BIOINFORMATICS (2013)
ShortStack: Comprehensive annotation and quantification of small RNA genes
Michael J. Axtell
RNA (2013)
Cloning of Acyl-ACP Thioesterase FatA from Arachis hypogaea L. and Its Expression in Escherichia coli
Gao Chen et al.
JOURNAL OF BIOMEDICINE AND BIOTECHNOLOGY (2012)
clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters
Guangchuang Yu et al.
OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY (2012)
The Phosphatidylcholine Diacylglycerol Cholinephosphotransferase Is Required for Efficient Hydroxy Fatty Acid Accumulation in Transgenic Arabidopsis
Zhaohui Hu et al.
PLANT PHYSIOLOGY (2012)
A novel hybrid gene prediction method employing protein multiple sequence alignments
Oliver Keller et al.
BIOINFORMATICS (2011)
Genetic Variation in Safflower (Carthamus tinctorious L.) for Seed Quality-Related Traits and Inter-Simple Sequence Repeat (ISSR) Markers
Pooran Golkar et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2011)
Ancestral polyploidy in seed plants and angiosperms
Yuannian Jiao et al.
NATURE (2011)
Full-length transcriptome assembly from RNA-Seq data without a reference genome
Manfred G. Grabherr et al.
NATURE BIOTECHNOLOGY (2011)
Expression of a small heat shock protein (CTL-hsyapr) screened by cDNA-AFLP approach is correlated with hydroxysafflor yellow A in safflower (Carthamus tinctorius L)
Jie Tang et al.
BIOCHEMICAL SYSTEMATICS AND ECOLOGY (2010)
Expression of CT-wpr, screened by cDNA-AFLP approach, associated with hydroxysafflor yellow A in Carthamus tinctorius L.
Yakui Li et al.
BIOCHEMICAL SYSTEMATICS AND ECOLOGY (2010)
MYB transcription factors in Arabidopsis
Christian Dubos et al.
TRENDS IN PLANT SCIENCE (2010)
KaKs_Calculator 2.0: A Toolkit Incorporating Gamma-Series Methods and Sliding Window Strategies
Dapeng Wang et al.
GENOMICS PROTEOMICS & BIOINFORMATICS (2010)
Structure and function of enzymes involved in the biosynthesis of phenylpropanoids
J. -L. Ferrer et al.
PLANT PHYSIOLOGY AND BIOCHEMISTRY (2008)
Transposase-derived transcription factors regulate light signaling in Arabidopsis
Rongcheng Lin et al.
SCIENCE (2007)
DNA sequence diversity and the origin of cultivated safflower (Carthamus tinctorius L.; Asteraceae)
Mark A. Chapman et al.
BMC PLANT BIOLOGY (2007)
Two calcium-dependent protein kinases, CPK4 and CPK11, regulate abscisic acid signal transduction in Arabidopsis
Sai-Yong Zhu et al.
PLANT CELL (2007)
Inferring speciation times under an episodic molecular clock
Bruce Rannala et al.
SYSTEMATIC BIOLOGY (2007)
Genome-wide natural antisense transcription: coupling its regulation to its different regulatory mechanisms
Michal Lapidot et al.
EMBO REPORTS (2006)
Comparison of prokaryotic diversity at offshore oceanic locations reveals a different microbiota in the Mediterranean Sea
Milagros Zaballos et al.
FEMS MICROBIOLOGY ECOLOGY (2006)
CAFE: a computational tool for the study of gene family evolution
T De Bie et al.
BIOINFORMATICS (2006)
Two FAD3 desaturase genes control the level of linolenic acid in flax seed
P Vrinten et al.
PLANT PHYSIOLOGY (2005)
Novel repeated DNA sequences in safflower (Carthamus tinctorius L.) (Asteraceae):: Cloning, sequencing, and physical mapping by fluorescence in situ hybridization
SN Raina et al.
JOURNAL OF HEREDITY (2005)
Gene identification in novel eukaryotic genomes by self-training algorithm
A Lomsadze et al.
NUCLEIC ACIDS RESEARCH (2005)
Arabidopsis OST1 protein kinase mediates the regulation of stomatal aperture by abscisic acid and acts upstream of reactive oxygen species production
AC Mustilli et al.
PLANT CELL (2002)
Duplication and adaptive evolution of the chalcone synthase genes of dendranthema (Asteraceae)
J Yang et al.
MOLECULAR BIOLOGY AND EVOLUTION (2002)
A KAS2 cDNA complements the phenotypes of the Arabidopsis fab1 mutant that differs in a single residue bordering the substrate binding pocket
AS Carlsson et al.
PLANT JOURNAL (2002)
PlantCARE, a database of plant cis-acting regulatory elements and a portal to tools for in silico analysis of promoter sequences
M Lescot et al.
NUCLEIC ACIDS RESEARCH (2002)
Spatial and temporal regulation of three different microsomal oleate desaturase genes (FAD2) from normal-type and high-oleic varieties of sunflower (Helianthus annuus L.)
JM Martínez-Rivas et al.
MOLECULAR BREEDING (2001)
Metabolic engineering and applications of flavonoids
G Forkmann et al.
CURRENT OPINION IN BIOTECHNOLOGY (2001)
分享论文
