4.6 Article

Ground-truth-free deep learning for artefacts reduction in 2D radial cardiac cine MRI using a synthetically generated dataset

期刊

PHYSICS IN MEDICINE AND BIOLOGY
卷 66, 期 9, 页码 -

出版社

IOP Publishing Ltd
DOI: 10.1088/1361-6560/abf278

关键词

deep learning; neural networks; transfer learning; MRI

资金

  1. German Research Foundation (DFG) [GRK2260]

向作者/读者索取更多资源

By leveraging a transfer-learning approach using 2D spatio-temporal profiles as training data, a CNN method can be successfully applied to cardiac cine MRI image reconstruction, showing comparable or even superior performance compared to CNNs trained on actual cine MR images. This method effectively overcomes challenges related to data quality and quantity limitations in fast dynamic processes.
In this work, we consider the task of image reconstruction in 2D radial cardiac cine MRI using deep learning (DL)-based regularization. As the regularization is achieved by employing an image-prior predicted by a pre-trained convolutional neural network (CNN), the quality of the image-prior is of essential importance. The achievable performance of any DL-based method is limited by the amount and the quality of the available training data. For fast dynamic processes, obtaining good-quality MR data is challenging because of technical and physiological reasons. In this work, we try to overcome these problems by a transfer-learning approach which is motivated by a previously presented DL-method (XT,YT U-Net). There, instead of training the network on the whole 2D dynamic images, it is trained on 2D spatio-temporal profiles (xt,yt-slices) which show the temporal changes of the imaged object. Therefore, for the training and test data, it is more important that their spatio-temporal profiles share similar local features rather than being images of the same anatomy. This allows us to equip arbitrary data with simulated motion that resembles the cardiac motion and use it as training data. By doing so, it is possible to train a CNN which is applicable to cardiac cine MR data without using ground-truth cine MR images for training. We demonstrate that combining XT,YT U-Net with the proposed transfer-learning strategy delivers comparable performance to CNNs trained on cardiac cine MR images and in some cases even qualitatively surpasses these. Additionally, the transfer-learning strategy was investigated for a 2D and 3D U-Net. The images processed by the the CNNs were used as image-priors in the CNN-regularized iterative reconstruction. The XT,YT U-Net yielded visibly better results than the 2D U-Net and slightly better results than the 3D U-Net when used in combination with the presented transfer learning-strategy.

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