4.5 Review

Pyrenoids: CO2-fixing phase separated liquid organelles

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biophysics

Physical Principles Underlying the Complex Biology of Intracellular Phase Transitions

Jeong-Mo Choi et al.

Annual Review of Biophysics (2020)

Review Biochemistry & Molecular Biology

Molecular structure in biomolecular condensates

Ivan Peran et al.

CURRENT OPINION IN STRUCTURAL BIOLOGY (2020)

Article Biochemistry & Molecular Biology

Origin and Evolution of Carboxysome Positioning Systems in Cyanobacteria

Joshua S. MacCready et al.

MOLECULAR BIOLOGY AND EVOLUTION (2020)

Article Multidisciplinary Sciences

Phase separation organizes the site of autophagosome formation

Yuko Fujioka et al.

NATURE (2020)

Article Physics, Multidisciplinary

Elastic ripening and inhibition of liquid-liquid phase separation

Kathryn A. Rosowski et al.

NATURE PHYSICS (2020)

Article Biochemistry & Molecular Biology

Multivalent interactions between CsoS2 and Rubisco mediate α-carboxysome formation

Luke M. Oltrogge et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2020)

Article Multidisciplinary Sciences

Endoplasmic reticulum contact sites regulate the dynamics of membraneless organelles

Jason E. Lee et al.

SCIENCE (2020)

Review Cell Biology

Mechanisms for Active Regulation of Biomolecular Condensates

Johannes Soeding et al.

TRENDS IN CELL BIOLOGY (2020)

Review Ecology

The New Tree of Eukaryotes

Fabien Burki et al.

TRENDS IN ECOLOGY & EVOLUTION (2020)

Article Chemistry, Physical

Biomolecular Phase Separation: From Molecular Driving Forces to Macroscopic Properties

Gregory L. Dignon et al.

Annual Review of Physical Chemistry (2020)

Review Plant Sciences

Prospects for Engineering Biophysical CO2 Concentrating Mechanisms into Land Plants to Enhance Yields

Jessica H. Hennacy et al.

ANNUAL REVIEW OF PLANT BIOLOGY, VOL 71, 2020 (2020)

Article Biochemistry & Molecular Biology

Cell biology of photosynthesis over geologic time

Avi Flamholz et al.

CURRENT BIOLOGY (2020)

Article Multidisciplinary Sciences

Cleavage-furrow formation without F-actin in Chlamydomonas

Masayuki Onishi et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2020)

Article Multidisciplinary Sciences

Condensation of Rubisco into a proto-pyrenoid in higher plant chloroplasts

Nicky Atkinson et al.

NATURE COMMUNICATIONS (2020)

Article Plant Sciences

The structural basis of Rubisco phase separation in the pyrenoid

Shan He et al.

NATURE PLANTS (2020)

Article Multidisciplinary Sciences

Assembly of the algal CO2-fixing organelle, the pyrenoid, is guided by a Rubisco-binding motif

Moritz T. Meyer et al.

SCIENCE ADVANCES (2020)

Article Plant Sciences

Stimulating photosynthetic processes increases productivity and water-use efficiency in the field

Patricia E. Lopez-Calcagno et al.

NATURE PLANTS (2020)

Article Plant Sciences

The hornwort genome and early land plant evolution

Jian Zhang et al.

NATURE PLANTS (2020)

Article Multidisciplinary Sciences

Rubisco condensate formation by CcmM in β-carboxysome biogenesis

H. Wang et al.

NATURE (2019)

Review Biochemistry & Molecular Biology

A brief history of thylakoid biogenesis

Annabel Mechela et al.

OPEN BIOLOGY (2019)

Article Genetics & Heredity

Analysis of an improved Cyanophora paradoxa genome assembly

Dana C. Price et al.

DNA RESEARCH (2019)

Article Biochemistry & Molecular Biology

Revisiting Trade-offs between Rubisco Kinetic Parameters

Avi Flamholz et al.

BIOCHEMISTRY (2019)

Article Chemistry, Multidisciplinary

Molecular Mechanisms of Membrane Curvature Sensing by a Disordered Protein

Wade F. Zeno et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2019)

Review Biochemistry & Molecular Biology

A Series of Fortunate Events: Introducing Chlamydomonas as a Reference Organism

Patrice A. Salome et al.

PLANT CELL (2019)

Article Multidisciplinary Sciences

A Rubisco-binding protein is required for normal pyrenoid number and starch sheath morphology in Chlamydomonas reinhardtii

Alan K. Itakura et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)

Article Multidisciplinary Sciences

Thylakoid localized bestrophin-like proteins are essential for the CO2 concentrating mechanism of Chlamydomonas reinhardtii

Ananya Mukherjee et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)

Article Cell Biology

Evaluating phase separation in live cells: diagnosis, caveats, and functional consequences

David T. McSwiggen et al.

GENES & DEVELOPMENT (2019)

Review Biochemistry & Molecular Biology

The Role of Post-Translational Modifications in the Phase Transitions of Intrinsically Disordered Proteins

Izzy Owen et al.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2019)

Review Chemistry, Multidisciplinary

Physical Chemistry of Cellular Liquid-Phase Separation

Emily P. Bentley et al.

CHEMISTRY-A EUROPEAN JOURNAL (2019)

Review Biochemistry & Molecular Biology

Friend or foePost-translational modifications as regulators of phase separation and RNP granule dynamics

Mario Hofweber et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2019)

Article Biotechnology & Applied Microbiology

Chrysochromulina: Genomic assessment and taxonomic diagnosis of the type species for an oleaginous algal clade

Blake T. Hovde et al.

ALGAL RESEARCH-BIOMASS BIOFUELS AND BIOPRODUCTS (2019)

Article Plant Sciences

Quantifying impacts of enhancing photosynthesis on crop yield

Alex Wu et al.

NATURE PLANTS (2019)

Review Plant Sciences

Organization out of disorder: liquid-liquid phase separation in plants

Cesar L. Cuevas-Velazquez et al.

CURRENT OPINION IN PLANT BIOLOGY (2018)

Article Biochemistry & Molecular Biology

A single N-terminal phosphomimic disrupts TDP-43 polymerization, phase separation, and RNA splicing

Ailin Wang et al.

EMBO JOURNAL (2018)

Article Multidisciplinary Sciences

Pyrenoid functions revealed by proteomics in Chlamydomonas reinhardtii

Yu Zhan et al.

PLOS ONE (2018)

Article Multidisciplinary Sciences

RNA self-assembly contributes to stress granule formation and defining the stress granule transcriptome

Briana Van Treeck et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)

Article Multidisciplinary Sciences

A liquid phase of synapsin and lipid vesicles

Dragomir Milovanovic et al.

SCIENCE (2018)

Article Multidisciplinary Sciences

Phase separation of a yeast prion protein promotes cellular fitness

Titus M. Franzmann et al.

SCIENCE (2018)

Review Cell Biology

Protein Phase Separation: A New Phase in Cell Biology

Steven Boeynaems et al.

TRENDS IN CELL BIOLOGY (2018)

Article Multidisciplinary Sciences

Carboxysome encapsulation of the CO2-fixing enzyme Rubisco in tobacco chloroplasts

Benedict M. Long et al.

NATURE COMMUNICATIONS (2018)

Article Biochemistry & Molecular Biology

Liquid Nuclear Condensates Mechanically Sense and Restructure the Genome

Yongdae Shin et al.

Article Multidisciplinary Sciences

The phase separation underlying the pyrenoid-based microalgal Rubisco supercharger

Tobias Wunder et al.

NATURE COMMUNICATIONS (2018)

Article Physics, Multidisciplinary

Growth and division of active droplets provides a model for protocells

David Zwicker et al.

NATURE PHYSICS (2017)

Review Plant Sciences

The algal pyrenoid: key unanswered questions

Moritz T. Meyer et al.

JOURNAL OF EXPERIMENTAL BOTANY (2017)

Review Plant Sciences

Progress and challenges of engineering a biophysical CO2-concentrating mechanism into higher plants

Benjamin D. Rae et al.

JOURNAL OF EXPERIMENTAL BOTANY (2017)

Review Cell Biology

Biomolecular condensates: organizers of cellular biochemistry

Salman F. Banani et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2017)

Article Plant Sciences

Multilayer gyroid cubic membrane organization in green alga Zygnema

Ting Zhan et al.

PROTOPLASMA (2017)

Article Multidisciplinary Sciences

ATP as a biological hydrotrope

Avinash Patel et al.

SCIENCE (2017)

Editorial Material Plant Sciences

Hornworts: An Overlooked Window into Carbon-Concentrating Mechanisms

Fay-Wei Li et al.

TRENDS IN PLANT SCIENCE (2017)

Review Biochemistry & Molecular Biology

The Diverse AAA plus Machines that Repair Inhibited Rubisco Active Sites

Oliver Mueller-Cajar

FRONTIERS IN MOLECULAR BIOSCIENCES (2017)

Article Biochemistry & Molecular Biology

Ionic Strength Sensing in Living Cells

Boqun Liu et al.

ACS CHEMICAL BIOLOGY (2017)

Article Biochemistry & Molecular Biology

The Eukaryotic CO2-Concentrating Organelle Is Liquid-like and Exhibits Dynamic Reorganization

Elizabeth S. Freeman Rosenzweig et al.

Article Biochemistry & Molecular Biology

A Spatial Interactome Reveals the Protein Organization of the Algal CO2-Concentrating Mechanism

Luke C. M. Mackinder et al.

Article Chemistry, Physical

Interfacial tension of reactive, liquid interfaces and its consequences

Anais Giustiniani et al.

ADVANCES IN COLLOID AND INTERFACE SCIENCE (2017)

Article Biochemistry & Molecular Biology

Stress-Triggered Phase Separation Is an Adaptive, Evolutionarily Tuned Response

Joshua A. Riback et al.

Article Biotechnology & Applied Microbiology

Introducing an algal carbon-concentrating mechanism into higher plants: location and incorporation of key components

Nicky Atkinson et al.

PLANT BIOTECHNOLOGY JOURNAL (2016)

Article Biochemistry & Molecular Biology

Compositional Control of Phase-Separated Cellular Bodies

Salman F. Banani et al.

Review Cell Biology

Phase separation in biology; functional organization of a higher order

Diana M. Mitrea et al.

CELL COMMUNICATION AND SIGNALING (2016)

Review Plant Sciences

Assembly, function and evolution of cyanobacterial carboxysomes

Cheryl A. Kerfeld et al.

CURRENT OPINION IN PLANT BIOLOGY (2016)

Review Plant Sciences

Will an algal CO2-concentrating mechanism work in higher plants?

Moritz T. Meyer et al.

CURRENT OPINION IN PLANT BIOLOGY (2016)

Review Biochemistry & Molecular Biology

Modulation of Intrinsically Disordered Protein Function by Post-translational Modifications

Alaji Bah et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2016)

Article Biochemistry & Molecular Biology

Sequence Determinants of Intracellular Phase Separation by Complex Coacervation of a Disordered Protein

Chi W. Pak et al.

MOLECULAR CELL (2016)

Article Multidisciplinary Sciences

Chloroplast-mediated regulation of CO2-concentrating mechanism by Ca2+-binding protein CAS in the green alga Chlamydomonas reinhardtii

Lianyong Wang et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)

Article Multidisciplinary Sciences

Structural insights into the LCIB protein family reveals a new group of β-carbonic anhydrases

Shengyang Jin et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)

Article Multidisciplinary Sciences

pH determines the energetic efficiency of the cyanobacterial CO2 concentrating mechanism

Niall M. Mangan et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)

Article Multidisciplinary Sciences

A repeat protein links Rubisco to form the eukaryotic carbon-concentrating organelle

Luke C. M. Mackinder et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)

Article Multidisciplinary Sciences

Thylakoid luminal θ-carbonic anhydrase critical for growth and photosynthesis in the marine diatom Phaeodactylum tricornutum

Sae Kikutani et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)

Article Multidisciplinary Sciences

Improving photosynthesis and crop productivity by accelerating recovery from photoprotection

Johannes Kromdijk et al.

SCIENCE (2016)

Review Biochemistry & Molecular Biology

Transport Selectivity of Nuclear Pores, Phase Separation, and Membraneless Organelles

H. Broder Schmidt et al.

TRENDS IN BIOCHEMICAL SCIENCES (2016)

Article Plant Sciences

Prospective function of FtsZ proteins in the secondary plastid of chlorarachniophyte algae

Yoshihisa Hirakawa et al.

BMC PLANT BIOLOGY (2015)

Review Plant Sciences

The hornworts: important advancements in early land plant evolution

Juan Carlos Villarreal et al.

JOURNAL OF BRYOLOGY (2015)

Article Biochemistry & Molecular Biology

Phase Transition of a Disordered Nuage Protein Generates Environmentally Responsive Membraneless Organelles

Timothy J. Nott et al.

MOLECULAR CELL (2015)

Article Multidisciplinary Sciences

The disordered P granule protein LAF-1 drives phase separation into droplets with tunable viscosity and dynamics

Shana Elbaum-Garfinkle et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)

Review Cell Biology

Liquid-Liquid Phase Separation in Biology

Anthony A. Hyman et al.

ANNUAL REVIEW OF CELL AND DEVELOPMENTAL BIOLOGY, VOL 30 (2014)

Review Biochemistry & Molecular Biology

Glycerolipids in photosynthesis: Composition, synthesis and trafficking

Laurence Boudiere et al.

BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS (2014)

Article Cell Biology

Site-Specific Basal Body Duplication in Chlamydomonas

Eileen T. O'Toole et al.

CYTOSKELETON (2014)

Article Multidisciplinary Sciences

Stability-activity tradeoffs constrain the adaptive evolution of RubisCO

Romain A. Studer et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Article Cell Biology

FtsZ in chloroplast division: structure, function and evolution

Allan D. TerBush et al.

CURRENT OPINION IN CELL BIOLOGY (2013)

Editorial Material Plant Sciences

Rubisco: still the most abundant protein of Earth?

John A. Raven

NEW PHYTOLOGIST (2013)

Article Biochemical Research Methods

Systemic Cold Stress Adaptation of Chlamydomonas reinhardtii

Luis Valledor et al.

MOLECULAR & CELLULAR PROTEOMICS (2013)

Review Plant Sciences

Photosynthesis-related quantities for education and modeling

Taras K. Antal et al.

PHOTOSYNTHESIS RESEARCH (2013)

Article Multidisciplinary Sciences

Yield Trends Are Insufficient to Double Global Crop Production by 2050

Deepak K. Ray et al.

PLOS ONE (2013)

Article Biochemistry & Molecular Biology

Identification and functional role of the carbonic anhydrase Cah3 in thylakoid membranes of pyrenoid of Chlamydomonas reinhardtii

Maria A. Sinetova et al.

BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS (2012)

Article Plant Sciences

HOW MANY SPECIES OF ALGAE ARE THERE?

Michael D. Guiry

JOURNAL OF PHYCOLOGY (2012)

Article Biochemistry & Molecular Biology

Expression of the Nucleus-Encoded Chloroplast Division Genes and Proteins Regulated by the Algal Cell Cycle

Shin-ya Miyagishima et al.

MOLECULAR BIOLOGY AND EVOLUTION (2012)

Article Multidisciplinary Sciences

Phase transitions in the assembly of multivalent signalling proteins

Pilong Li et al.

NATURE (2012)

Review Biology

Algal evolution in relation to atmospheric CO2: carboxylases, carbon-concentrating mechanisms and carbon oxidation cycles

John A. Raven et al.

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2012)

Article Multidisciplinary Sciences

Hornwort pyrenoids, carbon-concentrating structures, evolved and were lost at least five times during the last 100 million years

Juan Carlos Villarreal et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Multidisciplinary Sciences

Rubisco small-subunit α-helices control pyrenoid formation in Chlamydomonas

Moritz T. Meyer et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Biochemistry & Molecular Biology

The Moderately Efficient Enzyme: Evolutionary and Physicochemical Trends Shaping Enzyme Parameters

Arren Bar-Even et al.

BIOCHEMISTRY (2011)

Review Cell Biology

Structural basis of 14-3-3 protein functions

Tomas Obsil et al.

SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY (2011)

Article Cell Biology

RNA Granules in Germ Cells

Ekaterina Voronina et al.

COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY (2011)

Article Oceanography

Microscopic observation of pyrenoids in Order Ulvales (Chlorophyta) collected from Qingdao coast

Linhong Teng et al.

Journal of Ocean University of China (2011)

Article Anatomy & Morphology

Dynamic Organization and Plasticity of Sponge Bodies

Mark J. Snee et al.

DEVELOPMENTAL DYNAMICS (2009)

Article Multidisciplinary Sciences

Germline P Granules Are Liquid Droplets That Localize by Controlled Dissolution/Condensation

Clifford P. Brangwynne et al.

SCIENCE (2009)

Review Biochemical Research Methods

What is the maximum efficiency with which photosynthesis can convert solar energy into biomass?

Xin-Guang Zhu et al.

CURRENT OPINION IN BIOTECHNOLOGY (2008)

Article Plant Sciences

Ultrastructure of five Euglena species positioned in the subdivision Serpentes

Elsa Kusel-Fetzmann et al.

PROTOPLASMA (2008)

Review Microbiology

Proposed carbon dioxide concentrating mechanism in Chlamydomonas reinhardtii

James V. Moroney et al.

EUKARYOTIC CELL (2007)

Article Multidisciplinary Sciences

Despite slow catalysis and confused substrate specificity, all ribulose bisphosphate carboxylases may be nearly perfectly optimized

Guillaume G. B. Tcherkez et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Biochemical Research Methods

CO2 limitation induces specific redox-dependent protein phosphorylation in Chlamydomonas reinhardtii

Maria V. Turkina et al.

PROTEOMICS (2006)

Review Oncology

14-3-3 proteins: A historic overview

Alastair Aitken

SEMINARS IN CANCER BIOLOGY (2006)

Article Biochemistry & Molecular Biology

Molecular architecture of the thylakoid membrane: Lipid diffusion space for plastoquinone

H Kirchhoff et al.

BIOCHEMISTRY (2002)

Review Biochemistry & Molecular Biology

Structural basis of perturbed pKa values of catalytic groups in enzyme active sites

TK Harris et al.

IUBMB LIFE (2002)

Review Microbiology

Bacterial ancestry of actin and tubulin

F van den Ent et al.

CURRENT OPINION IN MICROBIOLOGY (2001)

Article Cell Biology

FtsZ ring formation at the chloroplast division site in plants

S Vitha et al.

JOURNAL OF CELL BIOLOGY (2001)