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He Fu et al.
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Kelly M. Wetmore et al.
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Pfam: the protein families database
Robert D. Finn et al.
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Incomplete Wood-Ljungdahl pathway facilitates one-carbon metabolism in organohalide-respiring Dehalococcoides mccartyi
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Mikko Laitaoja et al.
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Daniel H. Haft et al.
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Malay K. Basu et al.
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LigPlot+: Multiple Ligand-Protein Interaction Diagrams for Drug Discovery
Roman A. Laskowski et al.
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BglBrick vectors and datasheets: A synthetic biology platform for gene expression
Taek Soon Lee et al.
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The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases
Ron Caspi et al.
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MicrobesOnline: an integrated portal for comparative and functional genomics
Paramvir S. Dehal et al.
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FastTree 2-Approximately Maximum-Likelihood Trees for Large Alignments
Morgan N. Price et al.
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Novel Multiprotein Complexes Identified in the Hyperthermophilic Archaeon Pyrococcus furiosus by Non-denaturing Fractionation of the Native Proteome
Angeli Lal Menon et al.
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Iterative reconstruction of a global metabolic model of Acinetobacter baylyi ADP1 using high-throughput growth phenotype and gene essentiality data
Maxime Durot et al.
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A complete collection of single-gene deletion mutants of Acinetobacter baylyi ADP1
Veronique de Berardinis et al.
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Sha Huang et al.
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Activation of methyltetrahydrofolate by cobalamin-independent methionine synthase
RE Taurog et al.
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Cobalamin-independent methionine synthase (MetE): A face-to-face double barrel that evolved by gene duplication
R Pejchal et al.
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MUSCLE: multiple sequence alignment with high accuracy and high throughput
RC Edgar
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K Sajjaphan et al.
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JL Ferrer et al.
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WebLogo: A sequence logo generator
GE Crooks et al.
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B Buchenau et al.
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The COG database: an updated version includes eukaryotes
RL Tatusov et al.
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Cobalamin-dependent and cobalamin-independent methionine synthases: Are there two solutions to the same chemical problem?
RG Matthews et al.
HELVETICA CHIMICA ACTA (2003)
Arthrobacter aurescens TC1 metabolizes diverse s-triazine ring compounds
LC Strong et al.
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Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
J Castresana
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