相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Diploid Genome Assembly of the Wine Grape Carmenere
Andrea Minio et al.
G3-GENES GENOMES GENETICS (2019)
A high-quality apple genome assembly reveals the association of a retrotransposon and red fruit colour
Liyi Zhang et al.
NATURE COMMUNICATIONS (2019)
Flavonoid intake is associated with lower mortality in the Danish Diet Cancer and Health Cohort
Nicola P. Bondonno et al.
NATURE COMMUNICATIONS (2019)
A high-quality genome assembly from a single, field-collected spotted lanternfly (Lycorma delicatula) using the PacBio Sequel II system
Sarah B. Kingan et al.
GIGASCIENCE (2019)
A physical and genetic map of Cannabis sativa identifies extensive rearrangements at the THC/CBD acid synthase loci
Kaitlin U. Laverty et al.
GENOME RESEARCH (2019)
Errors in long-read assemblies can critically affect protein prediction
Mick Watson et al.
NATURE BIOTECHNOLOGY (2019)
A High-Quality De novo Genome Assembly from a Single Mosquito Using PacBio Sequencing
Sarah B. Kingan et al.
GENES (2019)
LTR_retriever: A Highly Accurate and Sensitive Program for Identification of Long Terminal Repeat Retrotransposons
Shujun Ou et al.
PLANT PHYSIOLOGY (2018)
Diversity and evolution of the repetitive genomic content in Cannabis sativa
Rahul Pisupati et al.
BMC GENOMICS (2018)
Therapeutic Perspectives of 8-Prenylnaringenin, a Potent Phytoestrogen from Hops
Katerina Stulikova et al.
MOLECULES (2018)
Piercing the dark matter: bioinformatics of long-range sequencing and mapping
Fritz J. Sedlazeck et al.
NATURE REVIEWS GENETICS (2018)
Single molecule real-time (SMRT) sequencing comes of age: applications and utilities for medical diagnostics
Simon Ardui et al.
NUCLEIC ACIDS RESEARCH (2018)
Non-estrogenic Xanthohumol Derivatives Mitigate Insulin Resistance and Cognitive Impairment in High-Fat Diet-induced Obese Mice
Cristobal L. Miranda et al.
SCIENTIFIC REPORTS (2018)
Anticancer Activity and Mechanism of Xanthohumol: A Prenylated Flavonoid From Hops (Humulus lupulus L.)
Chuan-Hao Jiang et al.
FRONTIERS IN PHARMACOLOGY (2018)
Purge Haplotigs: allelic contig reassignment for third-gen diploid genome assemblies
Michael J. Roach et al.
BMC BIOINFORMATICS (2018)
InterPro in 2017-beyond protein family and domain annotations
Robert D. Finn et al.
NUCLEIC ACIDS RESEARCH (2017)
QTL analysis of resistance to powdery mildew in hop (Humulus lupulus L.)
J. A. Henning et al.
EUPHYTICA (2017)
QTL examination of a bi-parental mapping population segregating for short-stature in hop (Humulus lupulus L.)
J. Henning et al.
EUPHYTICA (2017)
Hop Phytochemicals and Their Potential Role in Metabolic Syndrome Prevention and Therapy
Pavel Dostalek et al.
MOLECULES (2017)
Genome sequence of the progenitor of the wheat D genome Aegilops tauschii
Ming-Cheng Luo et al.
NATURE (2017)
A chromosome conformation capture ordered sequence of the barley genome
Martin Mascher et al.
NATURE (2017)
Adaptation to Partial Resistance to Powdery Mildew in the Hop Cultivar Cascade by Podosphaera macularis
David H. Gent et al.
PLANT DISEASE (2017)
HopBase: a unified resource for Humulus genomics
Steven T. Hill et al.
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION (2017)
Impact of transposable elements on polyploid plant genomes
Carlos M. Vicient et al.
ANNALS OF BOTANY (2017)
Is post-polyploidization diploidization the key to the evolutionary success of angiosperms?
Steven Dodsworth et al.
BOTANICAL JOURNAL OF THE LINNEAN SOCIETY (2016)
ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data
Jaime Huerta-Cepas et al.
MOLECULAR BIOLOGY AND EVOLUTION (2016)
Phased diploid genome assembly with single-molecule real-time sequencing
Chen-Shan Chin et al.
NATURE METHODS (2016)
Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown
Mihaela Pertea et al.
NATURE PROTOCOLS (2016)
Evolution of Gene Duplication in Plants
Nicholas Panchy et al.
PLANT PHYSIOLOGY (2016)
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs
Felipe A. Simao et al.
BIOINFORMATICS (2015)
Precision QTL mapping of downy mildew resistance in hop (Humulus lupulus L.)
J. A. Henning et al.
EUPHYTICA (2015)
StringTie enables improved reconstruction of a transcriptome from RNA-seq reads
Mihaela Pertea et al.
NATURE BIOTECHNOLOGY (2015)
Sequence heterogeneity of cannabidiolic- and tetrahydrocannabinolic acid-synthase in Cannabis sativa L. and its relationship with chemical phenotype
Chiara Onofri et al.
PHYTOCHEMISTRY (2015)
InParanoid 8: orthology analysis between 273 proteomes, mostly eukaryotic
Erik L. L. Sonnhammer et al.
NUCLEIC ACIDS RESEARCH (2015)
The Draft Genome of Hop (Humulus lupulus), an Essence for Brewing
Satoshi Natsume et al.
PLANT AND CELL PHYSIOLOGY (2015)
The radish genome and comprehensive gene expression profile of tuberous root formation and development
Yuki Mitsui et al.
SCIENTIFIC REPORTS (2015)
Humulus lupulus - a story that begs to be told. A review
Cynthia Almaguer et al.
JOURNAL OF THE INSTITUTE OF BREWING (2014)
The genome of Eucalyptus grandis
Alexander A. Myburg et al.
NATURE (2014)
Genome sequence of the hot pepper provides insights into the evolution of pungency in Capsicum species
Seungill Kim et al.
NATURE GENETICS (2014)
Molecular Cytogenetic Characterization of the Dioecious Cannabis sativa with an XY Chromosome Sex Determination System
Mikhail G. Divashuk et al.
PLOS ONE (2014)
The tobacco genome sequence and its comparison with those of tomato and potato
Nicolas Sierro et al.
NATURE COMMUNICATIONS (2014)
STAR: ultrafast universal RNA-seq aligner
Alexander Dobin et al.
BIOINFORMATICS (2013)
Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration
Helga Thorvaldsdottir et al.
BRIEFINGS IN BIOINFORMATICS (2013)
Transposable Elements: Powerful Contributors to Angiosperm Evolution and Diversity
Keith R. Oliver et al.
GENOME BIOLOGY AND EVOLUTION (2013)
Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data
Chen-Shan Chin et al.
NATURE METHODS (2013)
De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
Brian J. Haas et al.
NATURE PROTOCOLS (2013)
MIPS PlantsDB: a database framework for comparative plant genome research
Thomas Nussbaumer et al.
NUCLEIC ACIDS RESEARCH (2013)
Gene family evolution in green plants with emphasis on the origination and evolution of Arabidopsis thaliana genes
Ya-Long Guo
PLANT JOURNAL (2013)
Transposable Elements: An Abundant and Natural Source of Regulatory Sequences for Host Genes
Rita Rebollo et al.
ANNUAL REVIEW OF GENETICS, VOL 46 (2012)
Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
Cole Trapnell et al.
NATURE PROTOCOLS (2012)
Retrotransposons Control Fruit-Specific, Cold-Dependent Accumulation of Anthocyanins in Blood Oranges
Eugenio Butelli et al.
PLANT CELL (2012)
QTL mapping of powdery mildew susceptibility in hop (Humulus lupulus L.)
John A. Henning et al.
EUPHYTICA (2011)
Phytochemical and Morphological Characterization of Hop (Humulus lupulus L.) Cones over Five Developmental Stages Using High Performance Liquid Chromatography Coupled to Time-of-Flight Mass Spectrometry, Ultrahigh Performance Liquid Chromatography Photodiode Array Detection, and Light Microscopy Techniques
Adam R. Kavalier et al.
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY (2011)
MACSE: Multiple Alignment of Coding SEquences Accounting for Frameshifts and Stop Codons
Vincent Ranwez et al.
PLOS ONE (2011)
Species Delimitation under the General Lineage Concept: An Empirical Example Using Wild North American Hops (Cannabaceae: Humulus lupulus)
Patrick A. Reeves et al.
SYSTEMATIC BIOLOGY (2011)
TrichOME: A Comparative Omics Database for Plant Trichomes
Xinbin Dai et al.
PLANT PHYSIOLOGY (2010)
New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
Stephane Guindon et al.
SYSTEMATIC BIOLOGY (2010)
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
Salvador Capella-Gutierrez et al.
BIOINFORMATICS (2009)
Identification of candidate genes affecting δ9-tetrahydrocannabinol biosynthesis in Cannabis sativa
M. David Marks et al.
JOURNAL OF EXPERIMENTAL BOTANY (2009)
Hop (Humulus lupulus)-Derived Bitter Acids as Multipotent Bioactive Compounds
Marjan Van Cleemput et al.
JOURNAL OF NATURAL PRODUCTS (2009)
Real-Time DNA Sequencing from Single Polymerase Molecules
John Eid et al.
SCIENCE (2009)
LTRharvest, an efficient and flexible software for de novo detection of LTR retrotransposons
David Ellinghaus et al.
BMC BIOINFORMATICS (2008)
Pharmacognostic and pharmacological profile of Humulus lupulus L.
Paola Zanoli et al.
JOURNAL OF ETHNOPHARMACOLOGY (2008)
LTR_FINDER: an efficient tool for the prediction of full-length LTR retrotransposons
Zhao Xu et al.
NUCLEIC ACIDS RESEARCH (2007)
Cannabidiolic-acid synthase, the chemotype-determining enzyme in the fiber-type Cannabis sativa
Futoshi Taura et al.
FEBS LETTERS (2007)
Annotation, submission and screening of repetitive elements in Repbase: RepbaseSubmitter and Censor
Oleksiy Kohany et al.
BMC BIOINFORMATICS (2006)
The cellular functions of clathrin
S. J. Royle
CELLULAR AND MOLECULAR LIFE SCIENCES (2006)
Molecular phylogeny of wild hops, Humulus lupulus L.
A. Murakami et al.
HEREDITY (2006)
Gene prediction in eukaryotes with a generalized hidden Markov model that uses hints from external sources
M Stanke et al.
BMC BIOINFORMATICS (2006)
Genome size in Humulus lupulus L. and H-japonicus Siebold & Zucc. (Cannabaceae)
Aleksandra Grabowska-Joachimiak et al.
ACTA SOCIETATIS BOTANICORUM POLONIAE (2006)
The pharmacognosy of Humulus lupulus L. (hops) with an emphasis on estrogenic properties
LR Chadwick et al.
PHYTOMEDICINE (2006)
First nuclear DNA amounts in more than 300 angiosperms
BJM Zonneveld et al.
ANNALS OF BOTANY (2005)
Automated generation of heuristics for biological sequence comparison
GS Slater et al.
BMC BIOINFORMATICS (2005)
The gene controlling marijuana psychoactivity -: Molecular cloning and heterologous expression of Δ1-tetrahydrocannabinolic acid synthase from Cannabis sativa L.
S Sirikantaramas et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2004)
Isohumulones, bitter acids derived from hops, activate both peroxisome proliferator-activated receptor α and γ and reduce insulin resistance
H Yajima et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2004)
Retrotransposon-induced mutations in grape skin color
S Kobayashi et al.
SCIENCE (2004)
Xanthohumol and related prenylflavonoids from hops and beer: to your good health!
JF Stevens et al.
PHYTOCHEMISTRY (2004)
Versatile and open software for comparing large genomes
S Kurtz et al.
GENOME BIOLOGY (2004)
Gene prediction with a hidden Markov model and a new intron submodel
Mario Stanke et al.
BIOINFORMATICS (2003)
Formation and accumulation of α-acids, β-acids, desmethylxanthohumol, and xanthohumol during flowering of hops (Humulus lupulus L.)
J De Keukeleire et al.
JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY (2003)
GeoDis: a program for the cladistic nested analysis of the geographical distribution of genetic haplotypes
D Posada et al.
MOLECULAR ECOLOGY (2000)