相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。N6-adenosine methylation of ribosomal RNA affects lipid oxidation and stress resistance
Noa Liberman et al.
SCIENCE ADVANCES (2020)
Structural and catalytic roles of the human 18SrRNA methyltransferases DIMT1 in ribosome assembly and translation
Hui Shen et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2020)
Structure of the 80S ribosome-Xrn1 nuclease complex
Petr Tesina et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2019)
Cycloheximide can distort measurements of mRNA levels and translation efficiency
Daniel A. Santos et al.
NUCLEIC ACIDS RESEARCH (2019)
m6A enhances the phase separation potential of mRNA
Ryan J. Ries et al.
NATURE (2019)
The human 18S rRNA m6A methyltransferase METTL5 is stabilized by TRMT112
Nhan Van Tran et al.
NUCLEIC ACIDS RESEARCH (2019)
N-6-Methyladenosine methyltransferase ZCCHC4 mediates ribosomal RNA methylation
Honghui Ma et al.
NATURE CHEMICAL BIOLOGY (2019)
Functional 5′ UTR mRNA structures in eukaryotic translation regulation and how to find them
Kathrin Leppek et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2018)
MODOMICS: a database of RNA modification pathways. 2017 update
Pietro Boccaletto et al.
NUCLEIC ACIDS RESEARCH (2018)
The Discovery of Ribosome Heterogeneity and Its Implications for Gene Regulation and Organismal Life
Naomi R. Genuth et al.
MOLECULAR CELL (2018)
Tuning the ribosome: The influence of rRNA modification on eukaryotic ribosome biogenesis and function
Katherine E. Sloan et al.
RNA BIOLOGY (2017)
Transcriptome-wide measurement of translation by ribosome profiling
Nicholas J. McGlincy et al.
METHODS (2017)
The ATPase Fap7 Tests the Ability to Carry Out Translocation-like Conformational Changes and Releases Dim1 during 40S Ribosome Maturation
Homa Ghalei et al.
MOLECULAR CELL (2017)
m6A-dependent maternal mRNA clearance facilitates zebrafish maternal-to-zygotic transition
Boxuan Simen Zhao et al.
NATURE (2017)
Evidence for rRNA 2′-O-methylation plasticity: Control of intrinsic translational capabilities of human ribosomes
Jenny Erales et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2017)
The U6 snRNA m6A Methyltransferase METTL16 Regulates SAM Synthetase Intron Retention
Kathryn E. Pendleton et al.
CELL (2017)
Plastid: nucleotide-resolution analysis of next-generation sequencing and genomics data
Joshua G. Dunn et al.
BMC GENOMICS (2016)
N6-Methyladenosine in Flaviviridae Viral RNA Genomes Regulates Infection
Nandan S. Gokhale et al.
CELL HOST & MICROBE (2016)
Posttranscriptional m6A Editing of HIV-1 mRNAs Enhances Viral Gene Expression
Edward M. Kennedy et al.
CELL HOST & MICROBE (2016)
Pathways to Specialized Ribosomes: The Brussels Lecture
Jonathan D. Dinman
JOURNAL OF MOLECULAR BIOLOGY (2016)
The nature of mutations induced by replication-transcription collisions
T. Sabari Sankar et al.
NATURE (2016)
The complete chemical structure of Saccharomyces cerevisiae rRNA: partial pseudouridylation of U2345 in 25S rRNA by snoRNA snR9
Masato Taoka et al.
NUCLEIC ACIDS RESEARCH (2016)
Ribosome biogenesis factor Tsr3 is the aminocarboxypropyl transferase responsible for 18S rRNA hypermodification in yeast and humans
Britta Meyer et al.
NUCLEIC ACIDS RESEARCH (2016)
HNRNPA2B1 Is a Mediator of m6A-Dependent Nuclear RNA Processing Events
Claudio R. Alarcon et al.
CELL (2015)
N6-methyladenosine Modulates Messenger RNA Translation Efficiency
Xiao Wang et al.
CELL (2015)
RNA N6-methyladenosine methylation in post-transcriptional gene expression regulation
Yanan Yue et al.
GENES & DEVELOPMENT (2015)
The human 18S rRNA base methyltransferases DIMT1L and WBSCR22-TRMT112 but not rRNA modification are required for ribosome biogenesis
Christiane Zorbas et al.
MOLECULAR BIOLOGY OF THE CELL (2015)
N6-methyladenosine marks primary microRNAs for processing
Claudio R. Alarcon et al.
NATURE (2015)
Dynamic m6A mRNA methylation directs translational control of heat shock response
Jun Zhou et al.
NATURE (2015)
N6-methyladenosine-dependent RNA structural switches regulate RNA-protein interactions
Nian Liu et al.
NATURE (2015)
m6A mRNA methylation facilitates resolution of naive pluripotency toward differentiation
Shay Geula et al.
SCIENCE (2015)
'View From A Bricge': A New Perspective on Eukaryotic rRNA Base Modification
Sunny Sharma et al.
TRENDS IN BIOCHEMICAL SCIENCES (2015)
Methylation of ribosomal RNA by NSUN5 is a conserved mechanism modulating organismal lifespan
Markus Schosserer et al.
NATURE COMMUNICATIONS (2015)
Understanding Biases in Ribosome Profiling Experiments Reveals Signatures of Translation Dynamics in Yeast
Jeffrey A. Hussmann et al.
PLOS GENETICS (2015)
RNA regulons in Hox 5 ' UTRs confer ribosome specificity to gene regulation
Shifeng Xue et al.
NATURE (2015)
Structural Changes Enable Start Codon Recognition by the Eukaryotic Translation Initiation Complex
Tanweer Hussain et al.
CELL (2014)
N6-methyladenosine-dependent regulation of messenger RNA stability
Xiao Wang et al.
NATURE (2014)
A METTL3-METTL14 complex mediates mammalian nuclear RNA N6-adenosine methylation
Jianzhao Liu et al.
NATURE CHEMICAL BIOLOGY (2014)
Translation inhibitors cause abnormalities in ribosome profiling experiments
Maxim V. Gerashchenko et al.
NUCLEIC ACIDS RESEARCH (2014)
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Michael I. Love et al.
GENOME BIOLOGY (2014)
p53 Acts as a Safeguard of Translational Control by Regulating Fibrillarin and rRNA Methylation in Cancer
Virginie Marcel et al.
CANCER CELL (2013)
Sulfur Amino Acids Regulate Translational Capacity and Metabolic Homeostasis through Modulation of tRNA Thiolation
Sunil Laxman et al.
CELL (2013)
Ribosome heterogeneity: another level of complexity in bacterial translation regulation
Konstantin Byrgazov et al.
CURRENT OPINION IN MICROBIOLOGY (2013)
The Complexity of Human Ribosome Biogenesis Revealed by Systematic Nucleolar Screening of Pre-rRNA Processing Factors
Lionel Tafforeau et al.
MOLECULAR CELL (2013)
Yeast Rrp8p, a novel methyltransferase responsible for m(1)A 645 base modification of 25S rRNA
Christian Peifer et al.
NUCLEIC ACIDS RESEARCH (2013)
Identification of a novel methyltransferase, Bmt2, responsible for the N-1-methyl-adenosine base modification of 25S rRNA in Saccharomyces cerevisiae
Sunny Sharma et al.
NUCLEIC ACIDS RESEARCH (2013)
Probing N6-methyladenosine RNA modification status at single nucleotide resolution in mRNA and long noncoding RNA
Nian Liu et al.
RNA (2013)
TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
Daehwan Kim et al.
GENOME BIOLOGY (2013)
Microbial production of indolylglucosinolate through engineering of a multi-gene pathway in a versatile yeast expression platform
Michael Dalgaard Mikkelsen et al.
METABOLIC ENGINEERING (2012)
Selective sweeps in growing microbial colonies
Kirill S. Korolev et al.
PHYSICAL BIOLOGY (2012)
High-Resolution View of the Yeast Meiotic Program Revealed by Ribosome Profiling
Gloria A. Brar et al.
SCIENCE (2012)
RNA Methylation by the MIS Complex Regulates a Cell Fate Decision in Yeast
Sudeep D. Agarwala et al.
PLOS GENETICS (2012)
Cellular IRES-mediated translation The war of ITAFs in pathophysiological states
Anton A. Komar et al.
CELL CYCLE (2011)
Requirement of rRNA Methylation for 80S Ribosome Assembly on a Cohort of Cellular Internal Ribosome Entry Sites
Abhijit Basu et al.
MOLECULAR AND CELLULAR BIOLOGY (2011)
rRNA Pseudouridylation Defects Affect Ribosomal Ligand Binding and Translational Fidelity from Yeast to Human Cells
Karen Jack et al.
MOLECULAR CELL (2011)
RNA nucleotide methylation
Yuri Motorin et al.
WILEY INTERDISCIPLINARY REVIEWS-RNA (2011)
The role of IRES trans-acting factors in regulating translation initiation
Helen A. King et al.
BIOCHEMICAL SOCIETY TRANSACTIONS (2010)
Binding of Adenosine-Based Ligands to the MjDim1 rRNA Methyltransferase: Implications for Reaction Mechanism and Drug Design
Heather C. O'Farrell et al.
BIOCHEMISTRY (2010)
Loss of Function of the Tumor Suppressor DKC1 Perturbs p27 Translation Control and Contributes to Pituitary Tumorigenesis
Cristian Bellodi et al.
CANCER RESEARCH (2010)
An Evolutionarily Conserved Mechanism for Controlling the Efficiency of Protein Translation
Tamir Tuller et al.
CELL (2010)
Deregulation of oncogene-induced senescence and p53 translational control in X-linked dyskeratosis congenita
Cristian Bellodi et al.
EMBO JOURNAL (2010)
Yeast targets for mRNA methylation
Zsuzsanna Bodi et al.
NUCLEIC ACIDS RESEARCH (2010)
Structural and Functional Divergence within the Dim1/KsgA Family of rRNA Methyltransferases
Nagesh Pulicherla et al.
JOURNAL OF MOLECULAR BIOLOGY (2009)
Enzymatic assembly of DNA molecules up to several hundred kilobases
Daniel G. Gibson et al.
NATURE METHODS (2009)
Nucleotide modifications in three functionally important regions of the Saccharomyces cerevisiae ribosome affect translation accuracy
Agnes Baudin-Baillieu et al.
NUCLEIC ACIDS RESEARCH (2009)
Loss of rRNA modifications in the decoding center of the ribosome impairs translation and strongly delays pre-rRNA processing
Xue-Hai Liang et al.
RNA (2009)
Genome-Wide Analysis in Vivo of Translation with Nucleotide Resolution Using Ribosome Profiling
Nicholas T. Ingolia et al.
SCIENCE (2009)
Rational Extension of the Ribosome Biogenesis Pathway Using Network-Guided Genetics
Zhihua Li et al.
PLOS BIOLOGY (2009)
Re-programming of translation following cell stress allows IRES-mediated translation to predominate
Keith A. Spriggs et al.
BIOLOGY OF THE CELL (2008)
A quantitative estimation of the global translational activity in logarithmically growing yeast cells
Tobias von der Haar
BMC SYSTEMS BIOLOGY (2008)
Mechanistic insight into the ribosome biogenesis functions of the ancient protein KsgA
Keith Connolly et al.
MOLECULAR MICROBIOLOGY (2008)
Single-RNA counting reveals alternative modes of gene expression in yeast
Daniel Zenklusen et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2008)
Cyclic changes in metabolic state during the life of a yeast cell
Benjamin P. Tu et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Cap-independent translation is required for starvation-induced differentiation in yeast
Wendy V. Gilbert et al.
SCIENCE (2007)
Impaired control of IRES-mediated translation in X-linked dyskeratosis congenita
A Yoon et al.
SCIENCE (2006)
Discrimination between defects in elongation fidelity and termination efficiency insights into translational provides mechanistic readthrough
J Salas-Marco et al.
JOURNAL OF MOLECULAR BIOLOGY (2005)
Translational control in stress and apoptosis
M Holcik et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2005)
Leaky termination at premature stop codons antagonizes nonsense-mediated mRNA decay in S-cerevisiae
KM Keeling et al.
RNA (2004)
A novel partial modification at C2501 in Escherichia coli 23S ribosomal RNA
TE Andersen et al.
RNA (2004)
An optimized protocol for metabolome analysis in yeast using direct infusion electrospray mass spectrometry
JI Castrillo et al.
PHYTOCHEMISTRY (2003)
Ribosome structure and activity are altered in cells lacking snoRNPs that form pseudouridines in the peptidyl transferase center
TH King et al.
MOLECULAR CELL (2003)
Induction of sporulation in Saccharomyces cerevisiae leads to the formation of N6-methyladenosine in mRNA:: a potential mechanism for the activity of the IME4 gene
MJ Clancy et al.
NUCLEIC ACIDS RESEARCH (2002)
A second set of loxP marker cassettes for Cre-mediated multiple gene knockouts in budding yeast -: art. no. e23
U Gueldener et al.
NUCLEIC ACIDS RESEARCH (2002)
Yeast vectors for integration at the HO locus
Warren P. Voth et al.
NUCLEIC ACIDS RESEARCH (2001)
An interlaboratory comparison of physiological and genetic properties of four Saccharomyces cerevisiae strains
JP van Dijken et al.
ENZYME AND MICROBIAL TECHNOLOGY (2000)