4.8 Article

Damage-induced chromatome dynamics link Ubiquitin ligase and proteasome recruitment to histone loss and efficient DNA repair

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

A Cycle of Ubiquitination Regulates Adaptor Function of the Nedd4-Family Ubiquitin Ligase Rsp5

Chris MacDonald et al.

CURRENT BIOLOGY (2020)

Article Biochemistry & Molecular Biology

DNA Damage-Induced Nucleosome Depletion Enhances Homology Search Independently of Local Break Movement

Anais Cheblal et al.

MOLECULAR CELL (2020)

Article Computer Science, Interdisciplinary Applications

Integration of the ImageJ Ecosystem in KNIME Analytics Platform

Christian Dietz et al.

FRONTIERS IN COMPUTER SCIENCE (2020)

Article Biochemistry & Molecular Biology

The PRIDE database and related tools and resources in 2019: improving support for quantification data

Yasset Perez-Riverol et al.

NUCLEIC ACIDS RESEARCH (2019)

Review Cell Biology

Emerging roles of linker histones in regulating chromatin structure and function

Dmitry V. Fyodorov et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2018)

Review Genetics & Heredity

Chromosome Dynamics in Response to DNA Damage

Andrew Seeber et al.

ANNUAL REVIEW OF GENETICS, VOL 52 (2018)

Article Biochemistry & Molecular Biology

Bre1-dependent H2B ubiquitination promotes homologous recombination by stimulating histone eviction at DNA breaks

Sihao Zheng et al.

NUCLEIC ACIDS RESEARCH (2018)

Article Genetics & Heredity

The Yeast DNA Damage Checkpoint Kinase Rad53 Targets the Exoribonuclease, Xrn1

Jessica P. Lao et al.

G3-GENES GENOMES GENETICS (2018)

Article Biochemistry & Molecular Biology

Histone degradation in response to DNA damage enhances chromatin dynamics and recombination rates

Michael H. Hauer et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2017)

Review Biology

The INO80 remodeller in transcription, replication and repair

Jerome Poli et al.

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2017)

Article Biochemistry & Molecular Biology

Histone degradation in response to DNA damage enhances chromatin dynamics and recombination rates

Michael H. Hauer et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2017)

Article Cell Biology

Asf1 facilitates dephosphorylation of Rad53 after DNA double-strand break repair

Michael Tsabar et al.

GENES & DEVELOPMENT (2016)

Review Cell Biology

Regulation of DNA double-strand break repair by ubiquitin and ubiquitin-like modifiers

Petra Schwertman et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2016)

Article Biochemistry & Molecular Biology

53BP1 and the LINC Complex Promote Microtubule-Dependent DSB Mobility and DNA Repair

Francisca Lottersberger et al.

Article Genetics & Heredity

Chromatin dynamics after DNA damage: The legacy of the access-repair-restore model

Sophie E. Polo et al.

DNA REPAIR (2015)

Article Biochemistry & Molecular Biology

Rad25 Protein Is Targeted for Degradation by the Ubc4-Ufd4 Pathway

Xin Bao et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2015)

Review Biochemistry & Molecular Biology

INO80-C and SWR-C: Guardians of the Genome

Christian-Benedikt Gerhold et al.

JOURNAL OF MOLECULAR BIOLOGY (2015)

Article Multidisciplinary Sciences

Histone H1 couples initiation and amplification of ubiquitin signalling after DNA damage

Tina Thorslund et al.

NATURE (2015)

Article Cell Biology

Nucleosome remodelers in double-strand break repair

Andrew Seeber et al.

CURRENT OPINION IN GENETICS & DEVELOPMENT (2013)

Article Multidisciplinary Sciences

Break-induced replication occurs by conservative DNA synthesis

Roberto A. Donnianni et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)

Article Biochemistry & Molecular Biology

RNF168 Ubiquitinates K13-15 on H2A/H2AX to Drive DNA Damage Signaling

Francesca Mattiroli et al.

Article Genetics & Heredity

The Ubiquitin-Proteasome System of Saccharomyces cerevisiae

Daniel Finley et al.

GENETICS (2012)

Article Cell Biology

Increased chromosome mobility facilitates homology search during recombination

Judith Mine-Hattab et al.

NATURE CELL BIOLOGY (2012)

Article Biochemistry & Molecular Biology

Global Regulation of H2A.Z Localization by the INO80 Chromatin-Remodeling Enzyme Is Essential for Genome Integrity

Manolis Papamichos-Chronakis et al.

Article Biochemistry & Molecular Biology

Substantial Histone Reduction Modulates Genomewide Nucleosomal Occupancy and Global Transcriptional Output

Barbara Celona et al.

PLOS BIOLOGY (2011)

Review Biochemistry & Molecular Biology

Nhp6: A small but powerful effector of chromatin structure in Saccharomyces cerevisiae

David J. Stillman

BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS (2010)

Review Genetics & Heredity

Histones: Annotating Chromatin

Eric I. Campos et al.

ANNUAL REVIEW OF GENETICS (2009)

Review Biochemistry & Molecular Biology

Generation and management of excess histones during the cell cycle

Rakesh Kumar Singh et al.

FRONTIERS IN BIOSCIENCE-LANDMARK (2009)

Article Multidisciplinary Sciences

Distinct ubiquitin ligases act sequentially for RNA polymerase II polyubiquitylation

Michelle Harreman et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Review Biochemistry & Molecular Biology

The INO80 chromatin remodeling complex in transcription, replication and repair

Ronald C. Conaway et al.

TRENDS IN BIOCHEMICAL SCIENCES (2009)

Article Biochemistry & Molecular Biology

Break dosage, cell cycle stage and DNA replication influence DNA double strand break response

Christian Zierhut et al.

EMBO JOURNAL (2008)

Article Multidisciplinary Sciences

53BP1 promotes non-homologous end joining of telomeres by increasing chromatin mobility

Nadya Dimitrova et al.

NATURE (2008)

Article Biochemistry & Molecular Biology

RNF8 transduces the DNA-damage signal via histone ubiquitylation and checkpoint protein assembly

Michael S. Y. Huen et al.

Article Biochemical Research Methods

Semi-supervised learning for peptide identification from shotgun proteomics datasets

Lukas Kall et al.

NATURE METHODS (2007)

Article Genetics & Heredity

Histone H1 variant, H1R is involved in DNA damage response

Hideharu Hashimoto et al.

DNA REPAIR (2007)

Article Biochemistry & Molecular Biology

Distinct roles for SWR1 and INO80 chromatin remodeling complexes at chromosomal double-strand breaks

Haico van Attikum et al.

EMBO JOURNAL (2007)

Article Cell Biology

Autoregulation of an E2 enzyme by ubiquitin-chain assembly on its catalytic residue

Tommer Ravid et al.

NATURE CELL BIOLOGY (2007)

Article Biochemistry & Molecular Biology

A DNA integrity network in the yeast Saccharomyces cerevisiae

XW Pan et al.

Article Biochemical Research Methods

Parts per million mass accuracy on an orbitrap mass spectrometer via lock mass injection into a C-trap

JV Olsen et al.

MOLECULAR & CELLULAR PROTEOMICS (2005)

Article Biochemistry & Molecular Biology

Role of Dot1-dependent histone H3 methylation in G1 and S phase DNA damage checkpoint functions of Rad9

R Wysocki et al.

MOLECULAR AND CELLULAR BIOLOGY (2005)

Article Computer Science, Artificial Intelligence

Automatic tracking of individual fluorescence particles: Application to the study of chromosome dynamics

D Sage et al.

IEEE TRANSACTIONS ON IMAGE PROCESSING (2005)

Article Biochemistry & Molecular Biology

Characterization of E3Histone, a novel testis ubiquitin protein ligase which ubiquitinates histones

ZQ Liu et al.

MOLECULAR AND CELLULAR BIOLOGY (2005)

Article Biochemistry & Molecular Biology

The DNA damage checkpoint response requires histone H2B ubiquitination by Rad6-Bre1 and H3 methylation by Dot1

M Giannattasio et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2005)

Review Biotechnology & Applied Microbiology

Regulation of alternative replication bypass pathways at stalled replication forks and its effects on genome stability: a yeast model

L Barbour et al.

MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS (2003)

Article Multidisciplinary Sciences

Global analysis of protein expression in yeast

S Ghaemmaghami et al.

NATURE (2003)

Article Biochemistry & Molecular Biology

Suppression of homologous recombination by the Saccharomyces cerevisiae linker histone

JA Downs et al.

MOLECULAR CELL (2003)

Article Biochemistry & Molecular Biology

A conserved RING finger protein required for histone H2B monoubiquitination and cell size control

WW Hwang et al.

MOLECULAR CELL (2003)

Article Biochemistry & Molecular Biology

Ubiquitination of histone H2B by Rad6 is required for efficient Dot1-mediated methylation of histone H3 lysine 79

HH Ng et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2002)

Article Computer Science, Artificial Intelligence

Extraction of spots in biological images using multiscale products

JC Olivo-Marin

PATTERN RECOGNITION (2002)

Article Biochemistry & Molecular Biology

Methylation of histone H3 by COMPASS requires ubiquitination of histone H2B by Rad6

J Dover et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2002)

Article Multidisciplinary Sciences

A role for Saccharomyces cerevisiae histone H2A in DNA repair

JA Downs et al.

NATURE (2000)

Article Multidisciplinary Sciences

Rad6-dependent ubiquitination of histone H2B in yeast

K Robzyk et al.

SCIENCE (2000)