相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Analysis of vismodegib resistance in D473G and W535L mutants of SMO receptor and design of novel drug derivatives using molecular dynamics simulations
Siyan Liao et al.
LIFE SCIENCES (2020)
Design and development of high affinity dual anticancer peptide-inhibitors against p53-MDM2/X interaction
Nasim Rasafar et al.
LIFE SCIENCES (2020)
Structure of the M2 muscarinic receptor-β-arrestin complex in a lipid nanodisc
Dean P. Staus et al.
NATURE (2020)
Binding of agonist WAY-267,464 and antagonist WAY-methylated to oxytocin receptor probed by all-atom molecular dynamics simulations
Abdullahi Ibrahim Uba et al.
LIFE SCIENCES (2020)
Computational insights into tetracyclines as inhibitors against SARS-CoV-2 Mpro via combinatorial molecular simulation calculations
Shiv Bharadwaj et al.
LIFE SCIENCES (2020)
Triazoles bind the C-terminal domain of SMO: Illustration by docking and molecular dynamics simulations the binding between SMO and triazoles
Musang Liu et al.
LIFE SCIENCES (2019)
The Pfam protein families database in 2019
Sara El-Gebali et al.
NUCLEIC ACIDS RESEARCH (2019)
To probe interaction of morphine and IBNtxA with 7TM and 6TM variants of the human mu-opioid receptor using all-atom molecular dynamics simulations with an explicit membrane
Safaa Sader et al.
PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2018)
Phosphorylation-induced conformation of β2-adrenoceptor related to arrestin recruitment revealed by NMR
Yutaro Shiraishi et al.
NATURE COMMUNICATIONS (2018)
The Molecular Basis of G Protein-Coupled Receptor Activation
William I. Weis et al.
ANNUAL REVIEW OF BIOCHEMISTRY, VOL 87 (2018)
Norbixin, an apocarotenoid derivative activates PPARγ in cardiometabolic syndrome: Validation by in silico and in vivo experimental assessment
A. Rohini et al.
LIFE SCIENCES (2018)
A(2A) adenosine receptor functional states characterized by F-19-NMR
Lukas Susac et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
Computational insights into the G-protein-biased activation and inactivation mechanisms of the mu opioid receptor
Jian-xin Cheng et al.
ACTA PHARMACOLOGICA SINICA (2018)
Residues W320 and Y328 within the binding site of the μ-opioid receptor influence opiate ligand bias
J. Daniel Hothersall et al.
NEUROPHARMACOLOGY (2017)
Designing Safer Analgesics via μ-Opioid Receptor Pathways
H. C. Stephen Chan et al.
TRENDS IN PHARMACOLOGICAL SCIENCES (2017)
A randomized, Phase IIb study investigating oliceridine (TRV130), a novel μ-receptor G-protein pathway selective (μ-GPS) modulator, for the management of moderate to severe acute pain following abdominoplasty
Neil Singla et al.
JOURNAL OF PAIN RESEARCH (2017)
Activation-Induced Conformational Changes of Dopamine D3 Receptor Promote the Formation of the Internal Water Channel
Wei-Hsiang Weng et al.
SCIENTIFIC REPORTS (2017)
Mu-Opioid receptor biased ligands: A safer and painless discovery of analgesics?
Abraham Madariaga-Mazon et al.
DRUG DISCOVERY TODAY (2017)
Structural Basis for G Protein-Coupled Receptor Activation
Aashish Manglik et al.
BIOCHEMISTRY (2017)
Biased mu-opioid receptor ligands: a promising new generation of pain therapeutics
Edward R. Siuda et al.
CURRENT OPINION IN PHARMACOLOGY (2017)
OPLS3: A Force Field Providing Broad Coverage of Drug-like Small Molecules and Proteins
Edward Harder et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2016)
How Oliceridine (TRV-130) Binds and Stabilizes a μ-Opioid Receptor Conformational State That Selectively Triggers G Protein Signaling Pathways
Sebastian Schneider et al.
BIOCHEMISTRY (2016)
Structure-based discovery of opioid analgesics with reduced side effects
Aashish Manglik et al.
NATURE (2016)
Identification of a Conformational Equilibrium That Determines the Efficacy and Functional Selectivity of the μ-Opioid Receptor
Junya Okude et al.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2015)
Structural Insights into the Dynamic Process of β2-Adrenergic Receptor Signaling
Aashish Manglik et al.
CELL (2015)
Structural insights into μ-opioid receptor activation
Weijiao Huang et al.
NATURE (2015)
Propagation of conformational changes during μ-opioid receptor activation
Remy Sounier et al.
NATURE (2015)
Opiate Pharmacology and Relief of Pain
Gavril W. Pasternak
JOURNAL OF CLINICAL ONCOLOGY (2014)
Molecular control of δ-opioid receptor signalling
Gustavo Fenalti et al.
NATURE (2014)
Unifying Family A GPCR Theories of Activation
Benjamin G. Tehan et al.
PHARMACOLOGY & THERAPEUTICS (2014)
Protein and ligand preparation: parameters, protocols, and influence on virtual screening enrichments
G. Madhavi Sastry et al.
JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN (2013)
Molecular signatures of G-protein-coupled receptors
A. J. Venkatakrishnan et al.
NATURE (2013)
Opioid therapy for chronic pain in the United States: Promises and perils
Mark D. Sullivan et al.
PAIN (2013)
A G Protein-Biased Ligand at the μ-Opioid Receptor Is Potently Analgesic with Reduced Gastrointestinal and Respiratory Dysfunction Compared with Morphines
Scott M. DeWire et al.
JOURNAL OF PHARMACOLOGY AND EXPERIMENTAL THERAPEUTICS (2013)
NetworkView: 3D display and analysis of protein•RNA interaction networks
John Eargle et al.
BIOINFORMATICS (2012)
Action of Molecular Switches in GPCRs - Theoretical and Experimental Studies
B. Trzaskowski et al.
CURRENT MEDICINAL CHEMISTRY (2012)
Exploring Residue Component Contributions to Dynamical Network Models of Allostery
Adam T. VanWart et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2012)
Structure of the δ-opioid receptor bound to naltrindole
Sebastien Granier et al.
NATURE (2012)
Structure of the human κ-opioid receptor in complex with JDTic
Huixian Wu et al.
NATURE (2012)
OPM database and PPM web server: resources for positioning of proteins in membranes
Mikhail A. Lomize et al.
NUCLEIC ACIDS RESEARCH (2012)
Structural insights into biased G protein-coupled receptor signaling revealed by fluorescence spectroscopy
Rita Rahmeh et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Biased Signaling Pathways in β2-Adrenergic Receptor Characterized by 19F-NMR
Jeffrey J. Liu et al.
SCIENCE (2012)
ProDy: Protein Dynamics Inferred from Theory and Experiments
Ahmet Bakan et al.
BIOINFORMATICS (2011)
Activation mechanism of the β2-adrenergic receptor
Ron O. Dror et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Structural Basis for μ-Opioid Receptor Binding and Activation
Adrian W. R. Serohijos et al.
STRUCTURE (2011)
Prediction of Absolute Solvation Free Energies using Molecular Dynamics Free Energy Perturbation and the OPLS Force Field
Devleena Shivakumar et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2010)
Exit Strategies for Charged tRNA from GluRS
Alexis Black Pyrkosz et al.
JOURNAL OF MOLECULAR BIOLOGY (2010)
Normal mode analysis and applications in biological physics
Eric C. Dykeman et al.
JOURNAL OF PHYSICS-CONDENSED MATTER (2010)
Jalview Version 2-a multiple sequence alignment editor and analysis workbench
Andrew M. Waterhouse et al.
BIOINFORMATICS (2009)
MILCH SHAKE: An Efficient Method for Constraint Dynamics Applied to Alkanes
A. G. Bailey et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2009)
Dynamical networks in tRNA: protein complexes
Anurag Sethi et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
A Role for a Specific Cholesterol Interaction in Stabilizing the Apo Configuration of the Human A2A Adenosine Receptor
Edward Lyman et al.
STRUCTURE (2009)
An opioid agonist that does not induce μ-opioid receptor -: Arrestin interactions or receptor internalization
C. E. Groer et al.
MOLECULAR PHARMACOLOGY (2007)
75 years of opioid research: the exciting but vain quest for the Holy Grail
AD Corbett et al.
BRITISH JOURNAL OF PHARMACOLOGY (2006)
Software news and updates - Carma: A molecular dynamics analysis program
Nicholas M. Glykos
JOURNAL OF COMPUTATIONAL CHEMISTRY (2006)
Extra precision glide: Docking and scoring incorporating a model of hydrophobic enclosure for protein-ligand complexes
Richard A. Friesner et al.
JOURNAL OF MEDICINAL CHEMISTRY (2006)
Novel procedure for modeling ligand/receptor induced fit effects
W Sherman et al.
JOURNAL OF MEDICINAL CHEMISTRY (2006)
The role of opioid receptor internalization and β-arrestins in the development of opioid tolerance
ZY Zuo
ANESTHESIA AND ANALGESIA (2005)
Gaussian split Ewald: A fast Ewald mesh method for molecular simulation
YB Shan et al.
JOURNAL OF CHEMICAL PHYSICS (2005)
Mu-opioid receptors modulate the stability of dendritic spines
D Liao et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Morphine side effects in beta-arrestin 2 knockout mice
KM Raehal et al.
JOURNAL OF PHARMACOLOGY AND EXPERIMENTAL THERAPEUTICS (2005)
A hierarchical approach to all-atom protein loop prediction
MP Jacobson et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2004)
Opioid receptors
M Waldhoer et al.
ANNUAL REVIEW OF BIOCHEMISTRY (2004)
Opioid therapy for chronic pain
JC Ballantyne et al.
NEW ENGLAND JOURNAL OF MEDICINE (2003)
Evolutionarily conserved networks of residues mediate allosteric communication in proteins
GM Suel et al.
NATURE STRUCTURAL BIOLOGY (2003)
On the role of the crystal environment in determining protein side-chain conformations
MP Jacobson et al.
JOURNAL OF MOLECULAR BIOLOGY (2002)
Community structure in social and biological networks
M Girvan et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)
Structure and dynamics of the TIP3P, SPC, and SPC/E water models at 298 K
P Mark et al.
JOURNAL OF PHYSICAL CHEMISTRY A (2001)