4.7 Article

EnCurv: Simple Technique of Maintaining Global Membrane Curvature in Molecular Dynamics Simulations

期刊

JOURNAL OF CHEMICAL THEORY AND COMPUTATION
卷 17, 期 2, 页码 1181-1193

出版社

AMER CHEMICAL SOC
DOI: 10.1021/acs.jctc.0c00800

关键词

-

资金

  1. National Research Foundation of Ukraine [2020.01/0043]
  2. Lundbeckfonden [R82-2011-7280]
  3. Novo Nordisk Fonden [NNF18OC0034936]
  4. Novo Nordisk Fonden [NNF18OC0034936] Funding Source: researchfish

向作者/读者索取更多资源

The EnCurv method is introduced for maintaining membrane curvature in molecular dynamics simulations, allowing for any desired curvature in a lipid membrane sector bent in a single plane. The method is simple, easy to implement, and scales linearly with system size, while being agnostic to force field, simulation parameters, and membrane composition. The proof of principle implementation is compatible with most modern simulation packages and yields consistent results on model systems.
The EnCurv method for maintaining membrane curvature in molecular dynamics simulations is introduced. The method allows maintaining any desired curvature in a sector of lipid membrane bent in a single plane without adding any unphysical interactions into the system and without restrictions on lateral and transversal lipid diffusion and distribution. The current implementation is limited to the membranes curved in a single plane but generalization to arbitrary curvature and membrane topology is possible. The method is simple, easy to implement, and scales linearly with the system size. EnCurv is agnostic to the force field, simulation parameters, and membrane composition. The proof of principle implementation (https://github.com/yesint/EnCurv) is compatible with the majority of modern simulation packages and shows consistent results on the model systems.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.7
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

暂无数据
暂无数据