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Multiomics Integration in Skin Diseases with Alterations in Notch Signaling Pathway: PlatOMICs Phase 1 Deployment

期刊

出版社

MDPI
DOI: 10.3390/ijms22041523

关键词

omics; genomics; transcriptomics; proteomics; network interaction; skin diseases

资金

  1. Institute for Maternal and Child Health IRCCS Burlo Garofolo/Italian Ministry of Health [BioHub 03/20]
  2. CNPq [311415/2020-2]
  3. grant Interreg ItaliaSlovenia [ISE-EMH 07/2019]

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The high volume of information in the omics era has led to a better understanding of pathological processes, but the majority of results are divergent, limiting their applicability. Skin diseases with alterations in the Notch signaling pathway have been extensively studied, yet there are conflicting results.
The high volume of information produced in the age of omics was and still is an important step to understanding several pathological processes, providing the enlightenment of complex molecular networks and the identification of molecular targets associated with many diseases. Despite these remarkable scientific advances, the majority of the results are disconnected and divergent, making their use limited. Skin diseases with alterations in the Notch signaling pathway were extensively studied during the omics era. In the GWAS Catalog, considering only studies on genomics association (GWAS), several works were deposited, some of which with divergent results. In addition, there are thousands of scientific articles available about these skin diseases. In our study, we focused our attention on skin diseases characterized by the impairment of Notch signaling, this pathway being of pivotal importance in the context of epithelial disorders. We considered the pathologies of five human skin diseases, Hidradenitis Suppurativa, Dowling Degos Disease, Adams-Oliver Syndrome, Psoriasis, and Atopic Dermatitis, in which the molecular alterations in the Notch signaling pathway have been reported. To this end, we started developing a new multiomics platform, PlatOMICs, to integrate and re-analyze omics information, searching for the molecular interactions involved in the pathogenesis of skin diseases with alterations in the Notch signaling pathway.

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