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Corey C. Holt et al.
JOURNAL OF INVERTEBRATE PATHOLOGY (2021)
Hypoimmunity and intestinal bacterial imbalance are closely associated with blue body syndrome in cultured Penaeus vannamei
QingJian Liang et al.
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Zhijian Huang et al.
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White spot syndrome virus (WSSV) disturbs the intestinal microbiota of shrimp (Penaeus vannamei) reared in biofloc and clear seawater
Cecilia de Souza Valente et al.
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Lei Huang et al.
AQUACULTURE (2020)
Production of Highly Active Extracellular Amylase and Cellulase FromBacillus subtilisZIM3 and a Recombinant Strain With a Potential Application in Tobacco Fermentation
Jingcheng Dai et al.
FRONTIERS IN MICROBIOLOGY (2020)
White spot syndrome virus (WSSV) infection impacts intestinal microbiota composition and function in Litopenaeus vannamei
Jun Wang et al.
FISH & SHELLFISH IMMUNOLOGY (2019)
Causal relationships among the gut microbiome, short-chain fatty acids and metabolic diseases
Serena Sanna et al.
NATURE GENETICS (2019)
Characteristics of intestinal microbiota in the Pacific white shrimp Litopenaeus vannamei differing growth performances in the marine cultured environment
Lanfen Fan et al.
AQUACULTURE (2019)
Variations of the intestinal gut microbiota of farmed rainbow trout, Oncorhynchus mykiss (Walbaum), depending on the infection status of the fish
A. N. Parshukov et al.
JOURNAL OF APPLIED MICROBIOLOGY (2019)
Propionate-Producing Consortium Restores Antibiotic-Induced Dysbiosis in a Dynamic in vitro Model of the Human Intestinal Microbial Ecosystem
Racha El Hage et al.
FRONTIERS IN MICROBIOLOGY (2019)
Intestinal bacterial signatures of the cotton shrimp-like disease explain the change of growth performance and immune responses in Pacific white shrimp (Litopenaeus vannamei)
Li Zhou et al.
FISH & SHELLFISH IMMUNOLOGY (2019)
Comparison of the intestinal microbiota composition and function in healthy and diseased Yunlong Grouper
Chao Ma et al.
AMB EXPRESS (2019)
Bacterial population in intestines of white shrimp, Litopenaeus vannamei fed a synbiotic containing Lactobacillus plantarum and galactooligosaccharide
Truong-Giang Huynh et al.
AQUACULTURE RESEARCH (2019)
Intestinal Microbiota of White Shrimp Penaeus vannamei Under Intensive Cultivation Conditions in Ecuador
Oreste Gainza et al.
MICROBIAL ECOLOGY (2018)
Intestinal bacterial signatures of white feces syndrome in shrimp
Dongwei Hou et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2018)
Starvation influences the microbiota assembly and expression of immunity-related genes in the intestine of grass carp (Ctenopharyngodon idellus)
Ngoc Tuan Tran et al.
AQUACULTURE (2018)
Starvation stress affects the interplay among shrimp gut microbiota, digestion and immune activities
Wen-Fang Dai et al.
FISH & SHELLFISH IMMUNOLOGY (2018)
Comparative analysis of the bacterial community compositions of the shrimp intestine, surrounding water and sediment
D. Hou et al.
JOURNAL OF APPLIED MICROBIOLOGY (2018)
A meta-analysis reveals the environmental and host factors shaping the structure and function of the shrimp microbiota
Fernanda Cornejo-Granados et al.
PEERJ (2018)
Complete Genome Sequence of a Deletion Mutant of Vibrio parahaemolyticus from Pacific White Shrimp (Penaeus vannamei)
Siddhartha Kanrar et al.
GENOME ANNOUNCEMENTS (2018)
A meta-analysis reveals universal gut bacterial signatures for diagnosing the incidence of shrimp disease
Weina Yu et al.
FEMS MICROBIOLOGY ECOLOGY (2018)
Influence of different dietary carbohydrate sources on the growth and intestinal microbiota of Litopenaeus vannamei at low salinity
F. Qiao et al.
AQUACULTURE NUTRITION (2017)
The Underlying Ecological Processes of Gut Microbiota Among Cohabitating Retarded, Overgrown and Normal Shrimp
Jinbo Xiong et al.
MICROBIAL ECOLOGY (2017)
Composition, diversity and function of intestinal microbiota in pacific white shrimp (Litopenaeus vannamei) at different culture stages
Shenzheng Zeng et al.
PEERJ (2017)
Links of gut microbiota composition with alcohol dependence syndrome and alcoholic liver disease
Veronika B. Dubinkina et al.
MICROBIOME (2017)
Habitat and indigenous gut microbes contribute to the plasticity of gut microbiome in oriental river prawn during rapid environmental change
Cheng-Yu Chen et al.
PLOS ONE (2017)
Microbiome of Pacific Whiteleg shrimp reveals differential bacterial community composition between Wild, Aquacultured and AHPND/EMS outbreak conditions
Fernanda Cornejo-Granados et al.
SCIENTIFIC REPORTS (2017)
KEGG as a reference resource for gene and protein annotation
Minoru Kanehisa et al.
NUCLEIC ACIDS RESEARCH (2016)
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
Sudhir Kumar et al.
MOLECULAR BIOLOGY AND EVOLUTION (2016)
Benefits of short-chain fatty acids and their receptors in inflammation and carcinogenesis
Sathish Sivaprakasam et al.
PHARMACOLOGY & THERAPEUTICS (2016)
Changes in the intestinal bacterial community during the growth of white shrimp, Litopenaeus vannamei
Zhaobin Huang et al.
AQUACULTURE RESEARCH (2016)
qPCR assay for detecting and quantifying a virulence plasmid in acute hepatopancreatic necrosis disease (AHPND) due to pathogenic Vibrio parahaemolyticus
Jee Eun Han et al.
AQUACULTURE (2015)
The gut microbiome in health and in disease
Andrew B. Shreiner et al.
CURRENT OPINION IN GASTROENTEROLOGY (2015)
Photorhabdus insect-related (Pir) toxin-like genes in a plasmid of Vibrio parahaemolyticus, the causative agent of acute hepatopancreatic necrosis disease (AHPND) of shrimp
Jee Eun Han et al.
DISEASES OF AQUATIC ORGANISMS (2015)
Pathogenesis of acute hepatopancreatic necrosis disease (AHPND) in shrimp
Hung-Chiao Lai et al.
FISH & SHELLFISH IMMUNOLOGY (2015)
The opportunistic marine pathogen Vibrio parahaemolyticus becomes virulent by acquiring a plasmid that expresses a deadly toxin
Chung-Te Lee et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Field and Experimental Evidence of Vibrio parahaemolyticus as the Causative Agent of Acute Hepatopancreatic Necrosis Disease of Cultured Shrimp (Litopenaeus vannamei) in Northwestern Mexico
Sonia A. Soto-Rodriguez et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2015)
The HLA-DQ2 genotype selects for early intestinal microbiota composition in infants at high risk of developing coeliac disease
M. Olivares et al.
GUT (2015)
Understanding the role of gut microbiome in metabolic disease risk
Yolanda Sanz et al.
PEDIATRIC RESEARCH (2015)
Effects of Host Phylogeny and Habitats on Gut Microbiomes of Oriental River Prawn (Macrobrachium nipponense)
Tzong-Der Tzeng et al.
PLOS ONE (2015)
Variation in Vibrio parahaemolyticus isolates from a single Thai shrimp farm experiencing an outbreak of acute hepatopancreatic necrosis disease (AHPND)
Jyoti Joshi et al.
AQUACULTURE (2014)
The Treatment-Naive Microbiome in New-Onset Crohn's Disease
Dirk Gevers et al.
CELL HOST & MICROBE (2014)
Fish gut microbiota analysis differentiates physiology and behavior of invasive Asian carp and indigenous American fish
Lin Ye et al.
ISME JOURNAL (2014)
Characterization of the gut microbiota of three commercially valuable warmwater fish species
A. M. Larsen et al.
JOURNAL OF APPLIED MICROBIOLOGY (2014)
Predictive functional profiling of microbial communities using 16S rRNA marker gene sequences
Morgan G. I. Langille et al.
NATURE BIOTECHNOLOGY (2013)
UPARSE: highly accurate OTU sequences from microbial amplicon reads
Robert C. Edgar
NATURE METHODS (2013)
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
Christian Quast et al.
NUCLEIC ACIDS RESEARCH (2013)
Microbiota Regulate Intestinal Absorption and Metabolism of Fatty Acids in the Zebrafish
Ivana Semova et al.
CELL HOST & MICROBE (2012)
Structural segregation of gut microbiota between colorectal cancer patients and healthy volunteers
Tingting Wang et al.
ISME JOURNAL (2012)
A metagenome-wide association study of gut microbiota in type 2 diabetes
Junjie Qin et al.
NATURE (2012)
Butyrate and Propionate Protect against Diet-Induced Obesity and Regulate Gut Hormones via Free Fatty Acid Receptor 3-Independent Mechanisms
Hua V. Lin et al.
PLOS ONE (2012)
Propionate. Anti-obesity and satiety enhancing factor?
Tulika Arora et al.
APPETITE (2011)
Infaunal Burrows Are Enrichment Zones for Vibrio parahaemolyticus
Megan D. Gamble et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)
UCHIME improves sensitivity and speed of chimera detection
Robert C. Edgar et al.
BIOINFORMATICS (2011)
Evidence for a core gut microbiota in the zebrafish
Guus Roeselers et al.
ISME JOURNAL (2011)
Vibrio parahaemolyticus cell biology and pathogenicity determinants
Christopher A. Broberg et al.
MICROBES AND INFECTION (2011)
Propionate as a health-promoting microbial metabolite in the human gut
Elham Hosseini et al.
NUTRITION REVIEWS (2011)
Metagenomic biomarker discovery and explanation
Nicola Segata et al.
GENOME BIOLOGY (2011)
Pyrosequencing of 16S rRNA gene amplicons to study the microbiota in the gastrointestinal tract of carp (Cyprinus carpio L.)
Maartje A. H. J. van Kessel et al.
AMB EXPRESS (2011)
PyNAST: a flexible tool for aligning sequences to a template alignment
J. Gregory Caporaso et al.
BIOINFORMATICS (2010)
Intestinal dysbiosis and reduced immunoglobulin-coated bacteria associated with coeliac disease in children
Giada De Palma et al.
BMC MICROBIOLOGY (2010)
The role of mucosal immunity and host genetics in defining intestinal commensal bacteria
Jonathan Hansen et al.
CURRENT OPINION IN GASTROENTEROLOGY (2010)
Luminal and mucosal-associated intestinal microbiota in patients with diarrhea-predominant irritable bowel syndrome
Ian M. Carroll et al.
GUT PATHOGENS (2010)
Microbial community analysis reveals high level phylogenetic alterations in the overall gastrointestinal microbiota of diarrhoea-predominant irritable bowel syndrome sufferers
Lotta Krogius-Kurikka et al.
BMC GASTROENTEROLOGY (2009)
Vibrio parahaemolyticus: A concern of seafood safety
Yi-Cheng Su et al.
FOOD MICROBIOLOGY (2007)
Microbial ecology - Human gut microbes associated with obesity
Ruth E. Ley et al.
NATURE (2006)
Obesity alters gut microbial ecology
RE Ley et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
The Photorhabdus Pir toxins are similar to a developmentally regulated insect protein but show no juvenile hormone esterase activity
N Waterfield et al.
FEMS MICROBIOLOGY LETTERS (2005)
MUSCLE: multiple sequence alignment with high accuracy and high throughput
RC Edgar
NUCLEIC ACIDS RESEARCH (2004)