4.4 Review

TETology: Epigenetic Mastermind in Action

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Letter Cell Biology

Roles of Tet2 in meiosis, fertility and reproductive aging

Huasong Wang et al.

PROTEIN & CELL (2021)

Article Immunology

Tet2 and Tet3 in B cells are required to repress CD86 and prevent autoimmunity

Shinya Tanaka et al.

NATURE IMMUNOLOGY (2020)

Article Biochemistry & Molecular Biology

TET enzymes control antibody production and shape the mutational landscape in germinal centre B cells

Katia Schoeler et al.

FEBS JOURNAL (2019)

Article Biochemistry & Molecular Biology

The functional importance of structure in unstructured protein regions

Norman E. Davey

CURRENT OPINION IN STRUCTURAL BIOLOGY (2019)

Article Genetics & Heredity

Phosphorylation of TET2 by AMPK is indispensable in myogenic differentiation

Ting Zhang et al.

EPIGENETICS & CHROMATIN (2019)

Article Multidisciplinary Sciences

Loss of 5-methylcytosine alters the biogenesis of vault-derived small RNAs to coordinate epidermal differentiation

Abdulrahim A. Sajini et al.

NATURE COMMUNICATIONS (2019)

Article Multidisciplinary Sciences

TET3 prevents terminal differentiation of adult NSCs by a non-catalytic action at Snrpn

Raquel Montalban-Loro et al.

NATURE COMMUNICATIONS (2019)

Article Multidisciplinary Sciences

Loss of TET2 and TET3 in regulatory T cells unleashes effector function

Xiaojing Yue et al.

NATURE COMMUNICATIONS (2019)

Article Genetics & Heredity

TET2 missense variants in human neoplasia. A proposal of structural and functional classification

Elena Bussaglia et al.

MOLECULAR GENETICS & GENOMIC MEDICINE (2019)

Article Medicine, Research & Experimental

Tumor suppressor TET2 promotes cancer immunity and immunotherapy efficacy

Yan-ping Xu et al.

JOURNAL OF CLINICAL INVESTIGATION (2019)

Article Pathology

Potential role of TET2 in gastric cancer cisplatin resistance

Kun Zhou et al.

PATHOLOGY RESEARCH AND PRACTICE (2019)

Article Cell Biology

Rinf Regulates Pluripotency Network Genes and Tet Enzymes in Embryonic Stem Cells

Mirunalini Ravichandran et al.

CELL REPORTS (2019)

Article Cell Biology

TET2 Regulates the Neuroinflammatory Response in Microglia

Alejandro Carrillo-Jimenez et al.

CELL REPORTS (2019)

Article Biochemistry & Molecular Biology

Selectivity and Promiscuity in TET-Mediated Oxidation of 5-Methylcytosine in DNA and RNA

Jamie E. DeNizio et al.

BIOCHEMISTRY (2019)

Review Cell Biology

Evidence for calpains in cancer metastasis

Jiaxin Chen et al.

JOURNAL OF CELLULAR PHYSIOLOGY (2019)

Article Cell Biology

OxLDL induces vascular endothelial cell pyroptosis through miR-125a-5p/TET2 pathway

Zeng Zhaolin et al.

JOURNAL OF CELLULAR PHYSIOLOGY (2019)

Article Genetics & Heredity

Specific functions of TET1 and TET2 in regulating mesenchymal cell lineage determination

Dimitrios Cakouros et al.

EPIGENETICS & CHROMATIN (2019)

Article Multidisciplinary Sciences

TET-Catalyzed 5-Carboxylcytosine Promotes CTCF Binding to Suboptimal Sequences Genome-wide

Kyster K. Nanan et al.

ISCIENCE (2019)

Article Medicine, Research & Experimental

Epigenetic modulation of β cells by interferon-α via PNPT1/mir-26a/TET2 triggers autoimmune diabetes

Mihaela Stefan-Lifshitz et al.

JCI INSIGHT (2019)

Article Cell & Tissue Engineering

Transcription Factors Drive Tet2-Mediated Enhancer Demethylation to Reprogram Cell Fate

Jose Luis Sardina et al.

CELL STEM CELL (2018)

Article Biochemistry & Molecular Biology

TET1-Mediated Oxidation of 5-Formylcytosine (5fC) to 5-Carboxycytosine (5caC) in RNA

Maria Basanta-Sanchez et al.

CHEMBIOCHEM (2017)

Article Biochemistry & Molecular Biology

Mutations along a TET2 active site scaffold stall oxidation at 5-hydroxymethylcytosine

Monica Yun Liu et al.

NATURE CHEMICAL BIOLOGY (2017)

Article Biochemistry & Molecular Biology

TET2 binds the androgen receptor and loss is associated with prostate cancer

M. L. Nickerson et al.

ONCOGENE (2017)

Review Biochemistry & Molecular Biology

Mechanism and biological role of Dnmt2 in Nucleic Acid Methylation

Albert Jeltsch et al.

RNA BIOLOGY (2017)

Article Chemistry, Multidisciplinary

2′-O-Methyl-5-hydroxymethylcytidine: A Second Oxidative Derivative of 5-Methylcytidine in RNA

Sabrina M. Huber et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2017)

Article Biochemistry & Molecular Biology

Acetylation Enhances TET2 Function in Protecting against Abnormal DNA Methylation during Oxidative Stress

Yang W. Zhang et al.

MOLECULAR CELL (2017)

Review Biochemical Research Methods

Epitranscriptome sequencing technologies: decoding RNA modifications

Xiaoyu Li et al.

NATURE METHODS (2017)

Article Biochemistry & Molecular Biology

ALKBH1 is an RNA dioxygenase responsible for cytoplasmic and mitochondrial tRNA modifications

Layla Kawarada et al.

NUCLEIC ACIDS RESEARCH (2017)

Article Genetics & Heredity

Comprehensive evaluation of genome-wide 5-hydroxymethylcytosine profiling approaches in human DNA

Ksenia Skvortsova et al.

EPIGENETICS & CHROMATIN (2017)

Article Biochemistry & Molecular Biology

Silencing HIF-1α induces TET2 expression and augments ascorbic acid induced 5-hydroxymethylation of DNA in human metastatic melanoma cells

Adam P. Fischer et al.

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2017)

Article Biotechnology & Applied Microbiology

Distinct 5-methylcytosine profiles in poly(A) RNA from mouse embryonic stem cells and brain

Thomas Amort et al.

GENOME BIOLOGY (2017)

Article Biochemistry & Molecular Biology

TET-catalyzed oxidation of intragenic 5-methylcytosine regulates CTCF-dependent alternative splicing

Ryan J. Marina et al.

EMBO JOURNAL (2016)

Article Multidisciplinary Sciences

Insulator dysfunction and oncogene activation in IDH mutant gliomas

William A. Flavahan et al.

NATURE (2016)

Article Hematology

Autoimmune diseases and myelodysplastic syndromes

Rami S. Komrokji et al.

AMERICAN JOURNAL OF HEMATOLOGY (2016)

Article Medicine, Research & Experimental

Ten-Eleven Translocation Genes are Downregulated in Endometriosis

F. J. Roca et al.

CURRENT MOLECULAR MEDICINE (2016)

Review Cell Biology

Role of TET enzymes in DNA methylation, development, and cancer

Kasper Dindler Rasmussen et al.

GENES & DEVELOPMENT (2016)

Review Genetics & Heredity

Organization and function of the 3D genome

Boyan Bonev et al.

NATURE REVIEWS GENETICS (2016)

Article Multidisciplinary Sciences

Transcriptome-wide distribution and function of RNA hydroxymethylcytosine

Benjamin Delatte et al.

SCIENCE (2016)

Article Cell Biology

Genome-Editing Technologies: Principles and Applications

Thomas Gaj et al.

COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY (2016)

Article Oncology

Loss of nuclear localization of TET2 in colorectal cancer

Yuji Huang et al.

CLINICAL EPIGENETICS (2016)

Article Multidisciplinary Sciences

Quantifying mammalian genomic DNA hydroxymethylcytosine content using solid-state nanopores

Osama K. Zahid et al.

SCIENTIFIC REPORTS (2016)

Article Obstetrics & Gynecology

Prognostic values of 5-hmC, 5-mC and TET2 in epithelial ovarian cancer

Li-ying Zhang et al.

ARCHIVES OF GYNECOLOGY AND OBSTETRICS (2015)

Article Biochemistry & Molecular Biology

Formation and Abundance of 5-Hydroxymethylcytosine in RNA

Sabrina M. Huber et al.

CHEMBIOCHEM (2015)

Article Biochemistry & Molecular Biology

A Novel Function of TET2 in CNS: Sustaining Neuronal Survival

Yajing Mi et al.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2015)

Article Biochemistry & Molecular Biology

CRL4VprBP E3 Ligase Promotes Monoubiquitylation and Chromatin Binding of TET Dioxygenases

Tadashi Nakagawa et al.

MOLECULAR CELL (2015)

Article Biochemistry & Molecular Biology

WT1 Recruits TET2 to Regulate Its Target Gene Expression and Suppress Leukemia Cell Proliferation

Yiping Wang et al.

MOLECULAR CELL (2015)

Article Multidisciplinary Sciences

Structural insight into substrate preference for TET- mediated oxidation

Lulu Hu et al.

NATURE (2015)

Article Multidisciplinary Sciences

Tissue-based map of the human proteome

Mathias Uhlen et al.

SCIENCE (2015)

Review Genetics & Heredity

Methyl-CpG-binding domain proteins: readers of the epigenome

Qian Du et al.

EPIGENOMICS (2015)

Article Multidisciplinary Sciences

Expression of the vault RNA protects cells from undergoing apoptosis

Melanie Amort et al.

NATURE COMMUNICATIONS (2015)

Article Biochemistry & Molecular Biology

Down-regulation of Tet2 prevents TSDR demethylation in IL2 deficient regulatory T cells

Varun Sasidharan Nair et al.

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2014)

Article Chemistry, Multidisciplinary

Tet-Mediated Formation of 5-Hydroxymethylcytosine in RNA

Lijuan Fu et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2014)

Review Genetics & Heredity

CTCF: an architectural protein bridging genome topology and function

Chin-Tong Ong et al.

NATURE REVIEWS GENETICS (2014)

Article Medicine, General & Internal

Age-Related Clonal Hematopoiesis Associated with Adverse Outcomes

Siddhartha Jaiswal et al.

NEW ENGLAND JOURNAL OF MEDICINE (2014)

Article Cell Biology

Regulation of TET Protein Stability by Calpains

Yu Wang et al.

CELL REPORTS (2014)

Article Hematology

Myelodysplastic Syndromes (MDS) and autoimmune disorders (AD): Cause or consequence?

Thorsten Braun et al.

BEST PRACTICE & RESEARCH CLINICAL HAEMATOLOGY (2013)

Article Biochemistry & Molecular Biology

Crystal Structure of TET2-DNA Complex: Insight into TET-Mediated 5mC Oxidation

Lulu Hu et al.

Article Biochemistry & Molecular Biology

Dynamic Readers for 5-(Hydroxy)Methylcytosine and Its Oxidized Derivatives

Cornelia G. Spruijt et al.

Article Cardiac & Cardiovascular Systems

Ten-Eleven Translocation-2 (TET2) Is a Master Regulator of Smooth Muscle Cell Plasticity

Renjing Liu et al.

CIRCULATION (2013)

Article Chemistry, Multidisciplinary

Ascorbic Acid Enhances Tet-Mediated 5-Methylcytosine Oxidation and Promotes DNA Demethylation in Mammals

Ruichuan Yin et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2013)

Article Biochemistry & Molecular Biology

Oct4 and the small molecule inhibitor, SC1, regulates Tet2 expression in mouse embryonic stem cells

Yongyan Wu et al.

MOLECULAR BIOLOGY REPORTS (2013)

Article Biochemistry & Molecular Biology

Tet Proteins Connect the O-Linked N-acetylglucosamine Transferase Ogt to Chromatin in Embryonic Stem Cells

Pietro Vella et al.

MOLECULAR CELL (2013)

Article Multidisciplinary Sciences

TET2 promotes histone O-GlcNAcylation during gene transcription

Qiang Chen et al.

NATURE (2013)

Review Cell Biology

TETonic shift: biological roles of TET proteins in DNA demethylation and transcription

William A. Pastor et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2013)

Article Biochemistry & Molecular Biology

Long non-coding RNAs as targets for cytosine methylation

Thomas Amort et al.

RNA BIOLOGY (2013)

Article Multidisciplinary Sciences

Meta-analysis of IDH-mutant cancers identifies EBF1 as an interaction partner for TET2

Paul Guilhamon et al.

NATURE COMMUNICATIONS (2013)

Article Biochemistry & Molecular Biology

Base-Resolution Analysis of 5-Hydroxymethylcytosine in the Mammalian Genome

Miao Yu et al.

Review Biochemistry & Molecular Biology

Cellular strategies for making monoubiquitin signals

Harish N. Ramanathan et al.

CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY (2012)

Article Oncology

Landscape of TET2 mutations in acute myeloid leukemia

S. Weissmann et al.

LEUKEMIA (2012)

Article Biochemical Research Methods

Sensitive and specific single-molecule sequencing of 5-hydroxymethylcytosine

Chun-Xiao Song et al.

NATURE METHODS (2012)

Article Biochemical Research Methods

Tet-assisted bisulfite sequencing of 5-hydroxymethylcytosine

Miao Yu et al.

NATURE PROTOCOLS (2012)

Review Cell Biology

AMPK: a nutrient and energy sensor that maintains energy homeostasis

D. Grahame Hardie et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2012)

Article Biochemistry & Molecular Biology

Widespread occurrence of 5-methylcytosine in human coding and non-coding RNA

Jeffrey E. Squires et al.

NUCLEIC ACIDS RESEARCH (2012)

Meeting Abstract Hematology

Comprehensive Genetic Screening of Chronic Myelomonocytic Leukemias (CMML)

Raphael Itzykson et al.

Editorial Material Hematology

TET2: epigenetic safeguard for HSC

Myunggon Ko et al.

Article Biotechnology & Applied Microbiology

Selective chemical labeling reveals the genome-wide distribution of 5-hydroxymethylcytosine

Chun-Xiao Song et al.

NATURE BIOTECHNOLOGY (2011)

Article Multidisciplinary Sciences

Tet Proteins Can Convert 5-Methylcytosine to 5-Formylcytosine and 5-Carboxylcytosine

Shinsuke Ito et al.

SCIENCE (2011)

Article Multidisciplinary Sciences

Impaired hydroxylation of 5-methylcytosine in myeloid cancers with mutant TET2

Myunggon Ko et al.

NATURE (2010)

Review Cell Biology

Active DNA demethylation: many roads lead to Rome

Susan C. Wu et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2010)

Article Biochemistry & Molecular Biology

The GeneMANIA prediction server: biological network integration for gene prioritization and predicting gene function

David Warde-Farley et al.

NUCLEIC ACIDS RESEARCH (2010)

Editorial Material Genetics & Heredity

TET2 mutations in myelodysplasia and myeloid malignancies

Charles G. Mullighan

NATURE GENETICS (2009)

Article Medicine, General & Internal

Mutation in TET2 in Myeloid Cancers

Francois Delhommeau et al.

NEW ENGLAND JOURNAL OF MEDICINE (2009)

Review Genetics & Heredity

DNA hypomethylation in cancer cells

Melanie Ehrlich

EPIGENOMICS (2009)

Review Microbiology

Base J: Discovery, Biosynthesis, and Possible Functions

Piet Borst et al.

ANNUAL REVIEW OF MICROBIOLOGY (2008)

Review Biochemistry & Molecular Biology

The cell biology of DNA methylation in mammals

Egor Prokhortchouk et al.

BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH (2008)

Review Biochemistry & Molecular Biology

The colorful history of active DNA demethylation

Steen K. T. Ooi et al.

Review Biochemistry & Molecular Biology

Methyl-CpG binding proteins: specialized transcriptional repressors or structural components of chromatin?

T. Clouaire et al.

CELLULAR AND MOLECULAR LIFE SCIENCES (2008)

Article Biochemistry & Molecular Biology

AMPK phosphorylation of raptor mediates a metabolic checkpoint

Dana M. Gwinn et al.

MOLECULAR CELL (2008)

Article Biochemistry & Molecular Biology

Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome

Tae Hoon Kim et al.

Article Multidisciplinary Sciences

Activation of Rho-associated coiled-coil protein kinase 1 (ROCK-1) by caspase-3 cleavage plays an essential role in cardiac myocyte apoptosis

Jiang Chang et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)