相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。How the Protein Environment Can Tune the Energy, the Coupling, and the Ultrafast Dynamics of Interacting Chlorophylls: The Example of the Water-Soluble Chlorophyll Protein
Elisa Fresch et al.
JOURNAL OF PHYSICAL CHEMISTRY LETTERS (2020)
Ultrafast Excitation Transfer in Cy5 DNA Photonic Wires Displays Dye Conjugation and Excitation Energy Dependency
Richard J. Mazuski et al.
JOURNAL OF PHYSICAL CHEMISTRY LETTERS (2020)
Delocalized Two-Exciton States in DNA Scaffolded Cyanine Dimers
Paul D. Cunningham et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2020)
Identification of Nonradiative Decay Pathways in Cy3
Stephanie M. Hart et al.
JOURNAL OF PHYSICAL CHEMISTRY LETTERS (2020)
DNA scaffold supports long-lived vibronic coherence in an indodicarbocyanine (Cy5) dimer
Sara H. Sohail et al.
CHEMICAL SCIENCE (2020)
The Electronic Structure of Lutein 2 Is Optimized for Light Harvesting in Plants
Minjung Son et al.
CHEM (2019)
Programming Structured DNA Assemblies to Probe Biophysical Processes
Eike-Christian Wamhoff et al.
Annual Review of Biophysics (2019)
Directed Energy Transfer through DNA-Templated J-Aggregates
Sarthak Mandal et al.
BIOCONJUGATE CHEMISTRY (2019)
DNA-Templated Aggregates of Strongly Coupled Cyanine Dyes: Nonradiative Decay Governs Exciton Lifetimes
Jonathan S. Huff et al.
JOURNAL OF PHYSICAL CHEMISTRY LETTERS (2019)
Efficient Long-Range, Directional Energy Transfer through DNA-Templated Dye Aggregates
Xu Zhou et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2019)
Two-Dimensional Electronic Spectroscopy Reveals the Spectral Dynamics of Forster Resonance Energy Transfer
Brian K. Petkov et al.
CHEM (2019)
Automated sequence design of 2D wireframe DNA origami with honeycomb edges
Hyungmin Jun et al.
NATURE COMMUNICATIONS (2019)
Measuring the Ultrafast Correlation Dynamics between the Qx and Qy Bands in Chlorophyll Molecules
M. Faisal Khyasudeen et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2019)
Autonomously designed free-form 2D DNA origami
Hyungmin Jun et al.
SCIENCE ADVANCES (2019)
Measuring local conformations and conformational disorder of (Cy3)2 dimer labeled DNA fork junctions using absorbance, circular dichroism and two-dimensional fluorescence spectroscopy
Dylan Heussman et al.
FARADAY DISCUSSIONS (2019)
Programmed coherent coupling in a synthetic DNA-based excitonic circuit
Etienne Boulais et al.
NATURE MATERIALS (2018)
The effect of laser pulse bandwidth on the measurement of the frequency fluctuation correlation functions in 2D electronic spectroscopy
Pawel J. Nowakowski et al.
CHEMICAL PHYSICS (2018)
Expanded Theory of H- and J-Molecular Aggregates: The Effects of Vibronic Coupling and Intermolecular Charge Transfer
Nicholas J. Hestand et al.
CHEMICAL REVIEWS (2018)
Temperature-dependent conformations of exciton-coupled Cy3 dimers in double-stranded DNA
Loni Kringle et al.
JOURNAL OF CHEMICAL PHYSICS (2018)
Large Davydov Splitting and Strong Fluorescence Suppression: An Investigation of Exciton Delocalization in DNA-Templated Holliday Junction Dye Aggregates
Brittany L. Cannon et al.
JOURNAL OF PHYSICAL CHEMISTRY A (2018)
Optical Properties of Vibronically Coupled Cy3 Dimers on DNA Scaffolds
Paul D. Cunningham et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2018)
Exploiting Chromophore-Protein Interactions through Linker Engineering To Tune Photoinduced Dynamics in a Biomimetic Light-Harvesting Platform
Milan Delor et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2018)
Coherent wavepackets in the Fenna-Matthews-Olson complex are robust to excitonic-structure perturbations caused by mutagenesis
Margherita Maiuri et al.
NATURE CHEMISTRY (2018)
Complete Kinetic Theory of FRET
Tobias Eilert et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2018)
Photophysics of J-Aggregate-Mediated Energy Transfer on DNA
James L. Banal et al.
JOURNAL OF PHYSICAL CHEMISTRY LETTERS (2017)
Using coherence to enhance function in chemical and biophysical systems
Gregory D. Scholes et al.
NATURE (2017)
Controlling quantum-beating signals in 2D electronic spectra by packing synthetic heterodimers on single-walled carbon nanotubes
Lili Wang et al.
NATURE CHEMISTRY (2017)
Ultrabroadband 2D electronic spectroscopy with high-speed, shot-to-shot detection
Minjung Son et al.
OPTICS EXPRESS (2017)
Coherent electronic and nuclear dynamics in a rhodamine heterodimer-DNA supramolecular complex
M. Cipolloni et al.
PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2017)
Coherent Exciton Delocalization in a Two-State DNA-Templated Dye Aggregate System
Brittany L. Cannon et al.
JOURNAL OF PHYSICAL CHEMISTRY A (2017)
Perturbation of bacteriochlorophyll molecules in Fenna-Matthews-Olson protein complexes through mutagenesis of cysteine residues
Rafael Saer et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS (2016)
The Role of Resonant Vibrations in Electronic Energy Transfer
Pavel Maly et al.
CHEMPHYSCHEM (2016)
Assessing the Current State of Amber Force Field Modifications for DNA
Rodrigo Galindo-Murillo et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2016)
Proximity-Induced H-Aggregation of Cyanine Dyes on DNA-Duplexes
Francesca Nicoli et al.
JOURNAL OF PHYSICAL CHEMISTRY A (2016)
Methylene Blue Exciton States Steer Nonradiative Relaxation: Ultrafast Spectroscopy of Methylene Blue Dimer
Jacob C. Dean et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2016)
Programming Light-Harvesting Efficiency Using DNA Origami
Elisa A. Hemmig et al.
NANO LETTERS (2016)
DNA NANOTECHNOLOGY Designer nanoscale DNA assemblies programmed from the top down
Remi Veneziano et al.
SCIENCE (2016)
Valleytronics in 2D materials
John R. Schaibley et al.
NATURE REVIEWS MATERIALS (2016)
Experimental Implementations of Two-Dimensional Fourier Transform Electronic Spectroscopy
Franklin D. Fuller et al.
ANNUAL REVIEW OF PHYSICAL CHEMISTRY, VOL 66 (2015)
Metal-organic framework materials for light-harvesting and energy transfer
Monica C. So et al.
CHEMICAL COMMUNICATIONS (2015)
Center Line Slope Analysis in Two-Dimensional Electronic Spectroscopy
Frantisek Sanda et al.
JOURNAL OF PHYSICAL CHEMISTRY A (2015)
Manipulating Excited-State Dynamics of Individual Light-Harvesting Chromophores through Restricted Motions in a Hydrated Nanoscale Protein Cavity
Rodrigo Noriega et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2015)
Vibronic origin of long-lived coherence in an artificial molecular light harvester
James Lim et al.
NATURE COMMUNICATIONS (2015)
Vibronic phenomena and exciton-vibrational interference in two-dimensional spectra of molecular aggregates
Vytautas Butkus et al.
JOURNAL OF CHEMICAL PHYSICS (2014)
Photophysical and Dynamical Properties of Doubly Linked Cy3-DNA Constructs
Elana M. S. Stennett et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2014)
Direct Observation of Ultrafast Excimer Formation in Covalent Perylenediimide Dimers Using Near-Infrared Transient Absorption Spectroscopy
Kristen E. Brown et al.
JOURNAL OF PHYSICAL CHEMISTRY LETTERS (2014)
Accurate design of co-assembling multi-component protein nanomaterials
Neil P. King et al.
NATURE (2014)
Two-dimensional spectroscopy of a molecular dimer unveils the effects of vibronic coupling on exciton coherences
Alexei Halpin et al.
NATURE CHEMISTRY (2014)
An improved surface passivation method for single-molecule studies
Boyang Hua et al.
NATURE METHODS (2014)
J- vs. H-type assembly: pentamethine cyanine (Cy5) as a near-IR chiroptical reporter
Larysa I. Markova et al.
CHEMICAL COMMUNICATIONS (2013)
PTRAJ and CPPTRAJ: Software for Processing and Analysis of Molecular Dynamics Trajectory Data
Daniel R. Roe et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2013)
Relative and absolute determination of fluorescence quantum yields of transparent samples
Christian Wuerth et al.
NATURE PROTOCOLS (2013)
Electronic resonance with anticorrelated pigment vibrations drives photosynthetic energy transfer outside the adiabatic framework
Vivek Tiwari et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Engineering Coherence Among Excited States in Synthetic Heterodimer Systems
Dugan Hayes et al.
SCIENCE (2013)
A DNA-Based Light-Harvesting Antenna
Florian Garo et al.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2012)
Photon harvesting by excimer-forming multichromophores
Oliver O. Adeyemi et al.
CHEMICAL COMMUNICATIONS (2012)
Design principles of photosynthetic light-harvesting
Graham R. Fleming et al.
FARADAY DISCUSSIONS (2012)
The effect of correlated bath fluctuations on exciton transfer
Johan Struempfer et al.
JOURNAL OF CHEMICAL PHYSICS (2011)
Excitation Energy Transfer in a Non-Markovian Dynamical Disordered Environment: Localization, Narrowing, and Transfer Efficiency
Xin Chen et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2011)
DNA-Directed Artificial Light-Harvesting Antenna
Palash K. Dutta et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2011)
Accurate Distance Determination of Nucleic Acids via Forster Resonance Energy Transfer: Implications of Dye Linker Length and Rigidity
Simon Sindbert et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2011)
Lessons from nature about solar light harvesting
Gregory D. Scholes et al.
NATURE CHEMISTRY (2011)
NWChem: A comprehensive and scalable open-source solution for large scale molecular simulations
M. Valiev et al.
COMPUTER PHYSICS COMMUNICATIONS (2010)
Effect of correlation of local fluctuations on exciton coherence
Xin Chen et al.
JOURNAL OF CHEMICAL PHYSICS (2010)
Vibrational wave packet induced oscillations in two-dimensional electronic spectra. I. Experiments
Alexandra Nemeth et al.
JOURNAL OF CHEMICAL PHYSICS (2010)
Vibrational wave packet induced oscillations in two-dimensional electronic spectra. II. Theory
Tomas Mancal et al.
JOURNAL OF CHEMICAL PHYSICS (2010)
Dynamic fluorescence depolarization: A powerful tool to explore protein folding on the ribosome
Sarah A. Weinreis et al.
METHODS (2010)
Efficient energy transfer in light-harvesting systems, I: optimal temperature, reorganization energy and spatial-temporal correlations
Jianlan Wu et al.
NEW JOURNAL OF PHYSICS (2010)
Dynamics of Light Harvesting in Photosynthesis
Yuan-Chung Cheng et al.
ANNUAL REVIEW OF PHYSICAL CHEMISTRY (2009)
Impact of Emission Anisotropy on Fluorescence Spectroscopy and FRET Distance Measurements
Vassili Ivanov et al.
BIOPHYSICAL JOURNAL (2009)
Relationship between the Molecular Structure of Cyanine Dyes and the Vibrational Fine Structure of their Electronic Absorption Spectra
Heinz Mustroph et al.
CHEMPHYSCHEM (2009)
Lindblad equations for strongly coupled populations and coherences in photosynthetic complexes
Benoit Palmieri et al.
JOURNAL OF CHEMICAL PHYSICS (2009)
Self-assembly of DNA into nanoscale three-dimensional shapes
Shawn M. Douglas et al.
NATURE (2009)
Coherent Intrachain Energy Migration in a Conjugated Polymer at Room Temperature
Elisabetta Collini et al.
SCIENCE (2009)
Orientation dependence in fluorescent energy transfer between Cy3 and Cy5 terminally attached to double-stranded nuclelic acids
Asif Iqbal et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Frequency-frequency correlation functions and apodization in two-dimensional infrared vibrational echo spectroscopy: A new approach
Kyungwon Kwak et al.
JOURNAL OF CHEMICAL PHYSICS (2007)
Fluorescence properties and photophysics of the sulfoindocyanine Cy3 linked covalently to DNA
Matthew E. Sanborn et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2007)
Self-assembling light-harvesting systems from synthetically modified tobacco mosaic virus coat proteins
Rebekah A. Miller et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2007)
Fretting about FRET: Correlation between kappa and R
Darren B. VanBeek et al.
BIOPHYSICAL JOURNAL (2007)
The architecture and function of the light-harvesting apparatus of purple bacteria:: from single molecules to in vivo membranes
Richard J. Cogdell et al.
QUARTERLY REVIEWS OF BIOPHYSICS (2006)
Two-dimensional electronic spectroscopy of an excitonically coupled dimer
Par Kjellberg et al.
PHYSICAL REVIEW B (2006)
Two-dimensional electronic spectra of symmetric dimers:: Intermolecular coupling and conformational states
V Szöcs et al.
JOURNAL OF CHEMICAL PHYSICS (2006)
Folding DNA to create nanoscale shapes and patterns
PWK Rothemund
NATURE (2006)
Excitons in nanoscale systems
Gregory D. Scholes et al.
NATURE MATERIALS (2006)
Exciton analysis in 2D electronic spectroscopy
MH Cho et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2005)
Ultrafast aggregate-to-aggregate energy transfer within self-assembled light-harvesting columns of zinc phthalocyanine tetrakis(perylenediimide)
XY Li et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2004)
Development and testing of a general amber force field
JM Wang et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2004)
Reticular synthesis and the design of new materials
OM Yaghi et al.
NATURE (2003)
The flexibility of DNA double crossover molecules
P Sa-Ardyen et al.
BIOPHYSICAL JOURNAL (2003)
Optical properties of helical cylindrical molecular aggregates: The homogeneous limit
C Didraga et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2002)
Langevin stabilization of molecular dynamics
JA Izaguirre et al.
JOURNAL OF CHEMICAL PHYSICS (2001)
On the mechanism of light harvesting in photosynthetic purple bacteria: B800 to B850 energy transfer
GD Scholes et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2000)