4.7 Article Data Paper

Highly accurate long-read HiFi sequencing data for five complex genomes

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Multidisciplinary Sciences

GenomeScope 2.0 and Smudgeplot for reference-free profiling of polyploid genomes

T. Rhyker Ranallo-Benavidez et al.

NATURE COMMUNICATIONS (2020)

Article Biotechnology & Applied Microbiology

Assembly and annotation of an Ashkenazi human reference genome

Alaina Shumate et al.

GENOME BIOLOGY (2020)

Article Genetics & Heredity

Origin and evolution of the octoploid strawberry genome

Patrick P. Edger et al.

NATURE GENETICS (2019)

Article Biotechnology & Applied Microbiology

Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome

Aaron M. Wenger et al.

NATURE BIOTECHNOLOGY (2019)

Article Biochemical Research Methods

Minimap2: pairwise alignment for nucleotide sequences

Heng Li

BIOINFORMATICS (2018)

Article Biochemical Research Methods

Accurate detection of complex structural variations using single-molecule sequencing

Fritz J. Sedlazeck et al.

NATURE METHODS (2018)

Article Biochemistry & Molecular Biology

Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation

Sergey Koren et al.

GENOME RESEARCH (2017)

Article Multidisciplinary Sciences

Improved maize reference genome with single-molecule technologies

Yinping Jiao et al.

NATURE (2017)

Article Biochemical Research Methods

Evaluation of the impact of Illumina error correction tools on de novo genome assembly

Mahdi Heydari et al.

BMC BIOINFORMATICS (2017)

Article Biochemical Research Methods

Phased diploid genome assembly with single-molecule real-time sequencing

Chen-Shan Chin et al.

NATURE METHODS (2016)

Article Multidisciplinary Sciences

cDNA Library Enrichment of Full Length Transcripts for SMRT Long Read Sequencing

Maria Cartolano et al.

PLOS ONE (2016)

Article Biochemical Research Methods

WHATSHAP: Weighted Haplotype Assembly for Future-Generation Sequencing Reads

Murray Patterson et al.

JOURNAL OF COMPUTATIONAL BIOLOGY (2015)

Editorial Material Biochemistry & Molecular Biology

A first look at the Oxford Nanopore MinION sequencer

Alexander S. Mikheyev et al.

MOLECULAR ECOLOGY RESOURCES (2014)

Article Biochemical Research Methods

Nonhybrid, finished microbial genome assemblies from long-read SMRT sequencing data

Chen-Shan Chin et al.

NATURE METHODS (2013)

Article Biochemical Research Methods

DELLY: structural variant discovery by integrated paired-end and split-read analysis

Tobias Rausch et al.

BIOINFORMATICS (2012)

Article Biochemical Research Methods

A fast, lock-free approach for efficient parallel counting of occurrences of k-mers

Guillaume Marcais et al.

BIOINFORMATICS (2011)

Article Multidisciplinary Sciences

An integrated semiconductor device enabling non-optical genome sequencing

Jonathan M. Rothberg et al.

NATURE (2011)

Article Biochemical Research Methods

RNA-Seq analysis to capture the transcriptome landscape of a single cell

Fuchou Tang et al.

NATURE PROTOCOLS (2010)

Article Biochemistry & Molecular Biology

A flexible and efficient template format for circular consensus sequencing and SNP detection

Kevin J. Travers et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Biochemical Research Methods

The Sequence Alignment/Map format and SAMtools

Heng Li et al.

BIOINFORMATICS (2009)

Article Multidisciplinary Sciences

Targeted capture and massively parallel sequencing of 12 human exomes

Sarah B. Ng et al.

NATURE (2009)

Article Multidisciplinary Sciences

Real-Time DNA Sequencing from Single Polymerase Molecules

John Eid et al.

SCIENCE (2009)

Article Multidisciplinary Sciences

Accurate whole human genome sequencing using reversible terminator chemistry

David R. Bentley et al.

NATURE (2008)

Article Biochemical Research Methods

Stem cell transcriptome profiling via massive-scale mRNA sequencing

Nicole Cloonan et al.

NATURE METHODS (2008)