4.8 Article

Rapid parallel adaptation despite gene flow in silent crickets

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

Recurrent Collection of Drosophila melanogaster from Wild African Environments and Genomic Insights into Species History

Quentin D. Sprengelmeyer et al.

MOLECULAR BIOLOGY AND EVOLUTION (2020)

Article Biochemistry & Molecular Biology

Genomic Mechanisms of Physiological and Morphological Adaptations of Limestone Langurs to Karst Habitats

Zhijin Liu et al.

MOLECULAR BIOLOGY AND EVOLUTION (2020)

Article Biochemistry & Molecular Biology

Doublesex Mediates the Development of Sex-Specific Pheromone Organs in Bicyclus Butterflies via Multiple Mechanisms

Anupama Prakash et al.

MOLECULAR BIOLOGY AND EVOLUTION (2020)

Review Ecology

Understanding Admixture: Haplodiploidy to the Rescue

Pierre Nouhaud et al.

TRENDS IN ECOLOGY & EVOLUTION (2020)

Article Multidisciplinary Sciences

A shared genetic basis of mimicry across swallowtail butterflies points to ancestral co-option of doublesex

Daniela H. Palmer et al.

NATURE COMMUNICATIONS (2020)

Article Multidisciplinary Sciences

The nature of Neanderthal introgression revealed by 27,566 Icelandic genomes

Laurits Skov et al.

NATURE (2020)

Article Evolutionary Biology

Field cricket genome reveals the footprint of recent, abrupt adaptation in the wild

Sonia Pascoal et al.

EVOLUTION LETTERS (2020)

Article Multidisciplinary Sciences

Parallel adaptation of rabbit populations to myxoma virus

Joel M. Alves et al.

SCIENCE (2019)

Article Multidisciplinary Sciences

Testing the role of trait reversal in evolutionary diversification using song loss in wild crickets

Nathan W. Bailey et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)

Article Multidisciplinary Sciences

Genetics and evidence for balancing selection of a sex-linked colour polymorphism in a songbird

Kang-Wook Kim et al.

NATURE COMMUNICATIONS (2019)

Article Biology

Population genomics perspectives on convergent adaptation

Kristin M. Lee et al.

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2019)

Article Genetics & Heredity

Evolutionary Dynamics in Structured Populations Under Strong Population Genetic Forces

Alison F. Feder et al.

G3-GENES GENOMES GENETICS (2019)

Article Ecology

Spatial Population Genetics: It's About Time

Gideon S. Bradburd et al.

Annual Review of Ecology Evolution and Systematics (2019)

Article Multidisciplinary Sciences

Genomic architecture and introgression shape a butterfly radiation

Nathaniel B. Edelman et al.

SCIENCE (2019)

Article Multidisciplinary Sciences

DNA fragility in the parallel evolution of pelvic reduction in stickleback fish

Kathleen T. Xie et al.

SCIENCE (2019)

Article Genetics & Heredity

Powerful Inference with the D-Statistic on Low-Coverage Whole-Genome Data

Samuele Soraggi et al.

G3-GENES GENOMES GENETICS (2018)

Article Biochemistry & Molecular Biology

MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms

Sudhir Kumar et al.

MOLECULAR BIOLOGY AND EVOLUTION (2018)

Article Biochemistry & Molecular Biology

The Genetic Basis of Adaptation following Plastic Changes in Coloration in a Novel Environment

Ammon Corl et al.

CURRENT BIOLOGY (2018)

Article Ecology

Purring Crickets: The Evolution of a Novel Sexual Signal

Robin M. Tinghitella et al.

AMERICAN NATURALIST (2018)

Review Biology

The sources of adaptive variation

Deborah Charlesworth et al.

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2017)

Article Genetics & Heredity

A supergene determines highly divergent male reproductive morphs in the ruff

Clemens Kuepper et al.

NATURE GENETICS (2016)

Article Biotechnology & Applied Microbiology

Genome-wide patterns of copy number variation in the Chinese yak genome

Xiao Zhang et al.

BMC GENOMICS (2016)

Article Biochemistry & Molecular Biology

Population structure and gene flow in the global pest, Helicoverpa armigera

C. J. Anderson et al.

MOLECULAR ECOLOGY (2016)

Article Biochemical Research Methods

Transcript-level expression analysis of RNA-seq experiments with HISAT, StringTie and Ballgown

Mihaela Pertea et al.

NATURE PROTOCOLS (2016)

Article Multidisciplinary Sciences

Adaptive introgression in an African malaria mosquito coincident with the increased usage of insecticide-treated bed nets

Laura C. Norris et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)

Article Multidisciplinary Sciences

Yak whole-genome resequencing reveals domestication signatures and prehistoric population expansions

Qiang Qiu et al.

NATURE COMMUNICATIONS (2015)

Article Multidisciplinary Sciences

The ubiquity and ancestry of insect doublesex

Dana C. Price et al.

SCIENTIFIC REPORTS (2015)

Article Genetics & Heredity

Convergent Evolution During Local Adaptation to Patchy Landscapes

Peter L. Ralph et al.

PLOS GENETICS (2015)

Article Biochemistry & Molecular Biology

Copy number variations and genetic admixtures in three Xinjiang ethnic minority groups

Haiyi Lou et al.

EUROPEAN JOURNAL OF HUMAN GENETICS (2015)

Article Biochemical Research Methods

ANGSD: Analysis of Next Generation Sequencing Data

Thorfinn Sand Korneliussen et al.

BMC BIOINFORMATICS (2014)

Article Biochemistry & Molecular Biology

Rapid Convergent Evolution in Wild Crickets

Sonia Pascoal et al.

CURRENT BIOLOGY (2014)

Article Genetics & Heredity

The Effect of Linkage on Establishment and Survival of Locally Beneficial Mutations

Simon Aeschbacher et al.

GENETICS (2014)

Article Biochemistry & Molecular Biology

PopGenome: An Efficient Swiss Army Knife for Population Genomic Analyses in R

Bastian Pfeifer et al.

MOLECULAR BIOLOGY AND EVOLUTION (2014)

Article Biochemistry & Molecular Biology

Genome-wide variation within and between wild and domestic yak

Kun Wang et al.

MOLECULAR ECOLOGY RESOURCES (2014)

Article Multidisciplinary Sciences

doublesex is a mimicry supergene

K. Kunte et al.

NATURE (2014)

Article Biochemistry & Molecular Biology

The role of doublesex in the evolution of exaggerated horns in the Japanese rhinoceros beetle

Yuta Ito et al.

EMBO REPORTS (2013)

Review Genetics & Heredity

The genetic causes of convergent evolution

David L. Stern

NATURE REVIEWS GENETICS (2013)

Article Genetics & Heredity

Robust Demographic Inference from Genomic and SNP Data

Laurent Excoffier et al.

PLOS GENETICS (2013)

Article Biochemical Research Methods

PGDSpider: an automated data conversion tool for connecting population genetics and genomics programs

H. E. L. Lischer et al.

BIOINFORMATICS (2012)

Article Biochemical Research Methods

SortMeRNA: fast and accurate filtering of ribosomal RNAs in metatranscriptomic data

Evguenia Kopylova et al.

BIOINFORMATICS (2012)

Article Genetics & Heredity

Ancient Admixture in Human History

Nick Patterson et al.

GENETICS (2012)

Article Multidisciplinary Sciences

Butterfly genome reveals promiscuous exchange of mimicry adaptations among species

Kanchon K. Dasmahapatra et al.

NATURE (2012)

Review Genetics & Heredity

Adaptive evolution: evaluating empirical support for theoretical predictions

Carrie F. Olson-Manning et al.

NATURE REVIEWS GENETICS (2012)

Article Multidisciplinary Sciences

Diversification of doublesex function underlies morph-, sex-, and species-specific development of beetle horns

Teiya Kijimoto et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Article Genetics & Heredity

Genomic Variation and Its Impact on Gene Expression in Drosophila melanogaster

Andreas Massouras et al.

PLOS GENETICS (2012)

Article Biochemical Research Methods

The variant call format and VCFtools

Petr Danecek et al.

BIOINFORMATICS (2011)

Article Ecology

CONVERGENCE, ADAPTATION, AND CONSTRAINT

Jonathan B. Losos

EVOLUTION (2011)

Article Evolutionary Biology

Copy-Number Variation: The Balance between Gene Dosage and Expression in Drosophila melanogaster

Jun Zhou et al.

GENOME BIOLOGY AND EVOLUTION (2011)

Article Biochemistry & Molecular Biology

MorphoJ: an integrated software package for geometric morphometrics

Christian Peter Klingenberg

MOLECULAR ECOLOGY RESOURCES (2011)

Article Multidisciplinary Sciences

Inference of human population history from individual whole-genome sequences

Heng Li et al.

NATURE (2011)

Review Multidisciplinary Sciences

Climate change and evolutionary adaptation

Ary A. Hoffmann et al.

NATURE (2011)

Article Biochemical Research Methods

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

Mark D. Robinson et al.

BIOINFORMATICS (2010)

Article Biotechnology & Applied Microbiology

Expression profiling of prospero in the Drosophila larval chemosensory organ: Between growth and outgrowth

Laure Guenin et al.

BMC GENOMICS (2010)

Article Genetics & Heredity

Parallel Adaptation: One or Many Waves of Advance of an Advantageous Allele?

Peter Ralph et al.

GENETICS (2010)

Article Biochemistry & Molecular Biology

The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data

Aaron McKenna et al.

GENOME RESEARCH (2010)

Article Neurosciences

Control of sexual differentiation and behavior by the doublesex gene in Drosophila melanogaster

Elizabeth J. Rideout et al.

NATURE NEUROSCIENCE (2010)

Article Multidisciplinary Sciences

Adaptive Evolution of Pelvic Reduction in Sticklebacks by Recurrent Deletion of a Pitx1 Enhancer

Yingguang Frank Chan et al.

SCIENCE (2010)

Article Biochemical Research Methods

The Sequence Alignment/Map format and SAMtools

Heng Li et al.

BIOINFORMATICS (2009)

Article Biochemical Research Methods

Fast and accurate short read alignment with Burrows-Wheeler transform

Heng Li et al.

BIOINFORMATICS (2009)

Article Biochemistry & Molecular Biology

Analysis of the genome sequences of three Drosophila melanogaster spontaneous mutation accumulation lines

Peter D. Keightley et al.

GENOME RESEARCH (2009)

Article Biochemistry & Molecular Biology

Fast model-based estimation of ancestry in unrelated individuals

David H. Alexander et al.

GENOME RESEARCH (2009)

Article Biochemical Research Methods

BreakDancer: an algorithm for high-resolution mapping of genomic structural variation

Ken Chen et al.

NATURE METHODS (2009)

Article Medicine, General & Internal

Multiple Origins and Regional Dispersal of Resistant dhps in African Plasmodium falciparum Malaria

Richard J. Pearce et al.

PLOS MEDICINE (2009)

Review Multidisciplinary Sciences

The fixation probability of beneficial mutations

Z. Patwa et al.

JOURNAL OF THE ROYAL SOCIETY INTERFACE (2008)

Article Genetics & Heredity

PLINK: A tool set for whole-genome association and population-based linkage analyses

Shaun Purcell et al.

AMERICAN JOURNAL OF HUMAN GENETICS (2007)

Article Genetics & Heredity

Population structure and eigenanalysis

Nick Patterson et al.

PLOS GENETICS (2006)

Article Multidisciplinary Sciences

Global variation in copy number in the human genome

Richard Redon et al.

NATURE (2006)

Review Ecology

Hybridization as an invasion of the genome

J Mallet

TRENDS IN ECOLOGY & EVOLUTION (2005)

Article Biochemical Research Methods

Haploview: analysis and visualization of LD and haplotype maps

JC Barrett et al.

BIOINFORMATICS (2005)

Article Meteorology & Atmospheric Sciences

Surface temperature control in the North and tropical Pacific during the last glacial maximum

A Timmermann et al.

CLIMATE DYNAMICS (2004)

Article Evolutionary Biology

Phylogeny and the evolution of calling songs in Gryllus (Insecta, Orthoptera, Gryllidae)

L Desutter-Grandcolas et al.

ZOOLOGICA SCRIPTA (2003)

Article Multidisciplinary Sciences

Loss and recovery of wings in stick insects

MF Whiting et al.

NATURE (2003)

Article Biochemistry & Molecular Biology

The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000

A Bairoch et al.

NUCLEIC ACIDS RESEARCH (2000)