相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Consequences of microbial diversity in forest nitrogen cycling: diverse ammonifiers and specialized ammonia oxidizers
Kazuo Isobe et al.
ISME JOURNAL (2020)
Biological controls over the abundances of terrestrial ammonia oxidizers
Rui Xiao et al.
GLOBAL ECOLOGY AND BIOGEOGRAPHY (2020)
Multi-directional flow dynamics shape groundwater quality in sloping bedrock strata
Robert Lehmann et al.
JOURNAL OF HYDROLOGY (2020)
Legacy effects of drought on nitrate leaching in a temperate mixed forest on karst
Sonja Leitner et al.
JOURNAL OF ENVIRONMENTAL MANAGEMENT (2020)
Abundance and functional importance of complete ammonia-oxidizing bacteria (comammox) versus canonical nitrifiers in temperate forest soils
Ernest D. Osburn et al.
SOIL BIOLOGY & BIOCHEMISTRY (2020)
Influence of rewetting on microbial communities involved in nitrification and denitrification in a grassland soil after a prolonged drought period
Verena Hammerl et al.
SCIENTIFIC REPORTS (2019)
Predominance of Cand. Patescibacteria in Groundwater Is Caused by Their Preferential Mobilization From Soils and Flourishing Under Oligotrophic Conditions
Martina Herrmann et al.
FRONTIERS IN MICROBIOLOGY (2019)
The application of high-throughput sequencing technology to analysis of amoA phylogeny and environmental niche specialisation of terrestrial bacterial ammonia-oxidisers
Axel Aigle et al.
ENVIRONMENTAL MICROBIOME (2019)
Selective transport and retention of organic matter and bacteria shapes initial pedogenesis in artificial soil - A two-layer column study
Katharina Lehmann et al.
GEODERMA (2018)
The effect of drought and nitrogen fertiliser addition on nitrate leaching risk from a pasture soil; an assessment from a field experiment and modelling
Mark Shepherd et al.
JOURNAL OF THE SCIENCE OF FOOD AND AGRICULTURE (2018)
Effects of temperature and soil moisture on gross nitrification and denitrification rates of a Chinese lowland paddy field soil
Xuezhi Tan et al.
PADDY AND WATER ENVIRONMENT (2018)
Selective successional transport of bacterial populations from rooted agricultural topsoil to deeper layers upon extreme precipitation events
Lu Zhang et al.
SOIL BIOLOGY & BIOCHEMISTRY (2018)
Unifying the global phylogeny and environmental distribution of ammonia-oxidising archaea based on amoA genes
Ricardo J. Eloy Alves et al.
NATURE COMMUNICATIONS (2018)
Life in Dry Soils: Effects of Drought on Soil Microbial Communities and Processes
Joshua P. Schimel
ANNUAL REVIEW OF ECOLOGY, EVOLUTION, AND SYSTEMATICS, VOL 49 (2018)
Ammonia oxidation: Ecology, physiology, biochemistry and why they must all come together
Laura E. Lehtovirta-Morley
FEMS MICROBIOLOGY LETTERS (2018)
Bacterial mobilization and transport through manure enriched soils: Experiment and modeling
N. Sepehrnia et al.
JOURNAL OF ENVIRONMENTAL MANAGEMENT (2017)
Comammox-a newly discovered nitrification process in the terrestrial nitrogen cycle
Hang-Wei Hu et al.
JOURNAL OF SOILS AND SEDIMENTS (2017)
Land-use and fire drive temporal patterns of soil solution chemistry and nutrient fluxes
Karin Potthast et al.
SCIENCE OF THE TOTAL ENVIRONMENT (2017)
Partial drying accelerates bacterial growth recovery to rewetting
Annelein Meisner et al.
SOIL BIOLOGY & BIOCHEMISTRY (2017)
Soil carbon and nitrogen dynamics throughout the summer drought in a California annual grassland
Sean M. Schaeffer et al.
SOIL BIOLOGY & BIOCHEMISTRY (2017)
AmoA-Targeted Polymerase Chain Reaction Primers for the Specific Detection and Quantification of Comammox Nitrospira in the Environment
Petra Pjevac et al.
FRONTIERS IN MICROBIOLOGY (2017)
Taxonomic and functional shifts in the beech rhizosphere microbiome across a natural soil toposequence
Y. Colin et al.
SCIENTIFIC REPORTS (2017)
Forest biogeochemistry in response to drought
William H. Schlesinger et al.
GLOBAL CHANGE BIOLOGY (2016)
Bacteria transport and retention in intact calcareous soil columns under saturated flow conditions
Ahmad Farrokhian Firouzi et al.
JOURNAL OF HYDROLOGY AND HYDROMECHANICS (2015)
Complete nitrification by a single microorganism
Maartje A. H. J. van Kessel et al.
NATURE (2015)
Contributions of ammonia-oxidizing archaea and bacteria to nitrification in Oregon forest soils
Xinda Lu et al.
SOIL BIOLOGY & BIOCHEMISTRY (2015)
Spectroscopic characterization of extracellular polymeric substances from a mixed culture dominated by ammonia-oxidizing bacteria
Cuiqin Yin et al.
WATER RESEARCH (2015)
Diverse uncultivated ultra-small bacterial cells in groundwater
Birgit Luef et al.
NATURE COMMUNICATIONS (2015)
Archaeal Ammonia Oxidizers Dominate in Numbers, but Bacteria Drive Gross Nitrification in N-amended Grassland Soil
Anna E. Sterngren et al.
FRONTIERS IN MICROBIOLOGY (2015)
rrnDB: improved tools for interpreting rRNA gene abundance in bacteria and archaea and a new foundation for future development
Steven F. Stoddard et al.
NUCLEIC ACIDS RESEARCH (2015)
Assessing Nitrogen-Saturation in a Seasonally Dry Chaparral Watershed: Limitations of Traditional Indicators of N-Saturation
Peter M. Homyak et al.
ECOSYSTEMS (2014)
Selective transport of plant root-associated bacterial populations in agricultural soils upon snowmelt
Doerte Dibbern et al.
SOIL BIOLOGY & BIOCHEMISTRY (2014)
S-layers: principles and applications
Uwe B. Sleytr et al.
FEMS MICROBIOLOGY REVIEWS (2014)
Transcriptional Response of Nitrifying Communities to Wetting of Dry Soil
Sarah A. Placella et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)
Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform
James J. Kozich et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)
Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies
Anna Klindworth et al.
NUCLEIC ACIDS RESEARCH (2013)
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
Christian Quast et al.
NUCLEIC ACIDS RESEARCH (2013)
phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
Paul J. McMurdie et al.
PLOS ONE (2013)
Predominance of thaumarchaeal ammonia oxidizer abundance and transcriptional activity in an acidic fen
Martina Herrmann et al.
ENVIRONMENTAL MICROBIOLOGY (2012)
Stimulation of thaumarchaeal ammonia oxidation by ammonia derived from organic nitrogen but not added inorganic nitrogen
Spela Levicnik-Hoefferle et al.
FEMS MICROBIOLOGY ECOLOGY (2012)
Ammonia-oxidizing archaea have more important role than ammonia-oxidizing bacteria in ammonia oxidation of strongly acidic soils
Li-Mei Zhang et al.
ISME JOURNAL (2012)
Capturing Single Cell Genomes of Active Polysaccharide Degraders: An Unexpected Contribution of Verrucomicrobia
Manuel Martinez-Garcia et al.
PLOS ONE (2012)
Bacterial growth and respiration responses upon rewetting dry forest soils: Impact of drought-legacy
Hans Göransson et al.
SOIL BIOLOGY & BIOCHEMISTRY (2012)
Archaeal and bacterial ammonia-oxidisers in soil: the quest for niche specialisation and differentiation
James I. Prosser et al.
TRENDS IN MICROBIOLOGY (2012)
Links between Ammonia Oxidizer Community Structure, Abundance, and Nitrification Potential in Acidic Soils
Huaiying Yao et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)
UCHIME improves sensitivity and speed of chimera detection
Robert C. Edgar et al.
BIOINFORMATICS (2011)
Transitions in bacterial communities along the 2000 km salinity gradient of the Baltic Sea
Daniel P. R. Herlemann et al.
ISME JOURNAL (2011)
The archaeal cell envelope
Sonja-Verena Albers et al.
NATURE REVIEWS MICROBIOLOGY (2011)
Cultivation of an obligate acidophilic ammonia oxidizer from a nitrifying acid soil
Laura E. Lehtovirta-Morley et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Plants control the seasonal dynamics of microbial N cycling in a beech forest soil by belowground C allocation
Christina Kaiser et al.
ECOLOGY (2010)
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
Patrick D. Schloss et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
On the fate of anthropogenic nitrogen
William H. Schlesinger
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Bacterial interactions and transport in unsaturated porous media
Gang Chen
COLLOIDS AND SURFACES B-BIOINTERFACES (2008)
The influence of soil pH on the diversity, abundance and transcriptional activity of ammonia oxidizing archaea and bacteria
Graeme W. Nicol et al.
ENVIRONMENTAL MICROBIOLOGY (2008)
Growth, activity and temperature responses of ammonia-oxidizing archaea and bacteria in soil microcosms
Maria Tourna et al.
ENVIRONMENTAL MICROBIOLOGY (2008)
An Earth-system perspective of the global nitrogen cycle
Nicolas Gruber et al.
NATURE (2008)
Global nitrogen deposition and carbon sinks
Dave S. Reay et al.
NATURE GEOSCIENCE (2008)
Drying and rewetting effects on soil microbial community composition and nutrient leaching
Helen Gordon et al.
SOIL BIOLOGY & BIOCHEMISTRY (2008)
Microbial stress-response physiology and its implications for ecosystem function
Joshua Schimel et al.
ECOLOGY (2007)
Genomic analysis of the uncultivated marine crenarchaeote Cenarchaeum symbiosum
Steven J. Hallam et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Archaea predominate among ammonia-oxidizing prokaryotes in soils
S. Leininger et al.
NATURE (2006)
Nitrite production by Nitrosomonas europaea and Nitrosospira sp AV in soils at different solution concentrations of ammonium
AE Taylor et al.
SOIL BIOLOGY & BIOCHEMISTRY (2006)
Leaching of nitrate from temperate forests - effects of air pollution and forest management
Per Gundersen et al.
ENVIRONMENTAL REVIEWS (2006)
Ubiquity and diversity of ammonia-oxidizing archaea in water columns and sediments of the ocean
CA Francis et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Isolation of an autotrophic ammonia-oxidizing marine archaeon
M Könneke et al.
NATURE (2005)
Leaching of nitrate and ammonium in heathland and forest ecosystems in Northwest Germany under the influence of enhanced nitrogen deposition
M Herrmann et al.
PLANT AND SOIL (2005)
Nitrate leaching in forest soils: an analysis of long-term monitoring sites in Germany
W Borken et al.
JOURNAL OF PLANT NUTRITION AND SOIL SCIENCE (2004)
16S rRNA and amoA-based phylogeny of 12 novel betaproteobacterial ammonia-oxidizing isolates:: extension of the dataset and proposal of a new lineage within the nitrosomonads
U Purkhold et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2003)
Oligonucleotide microarray for 16S rRNA gene-based detection of all recognized lineages of sulfate-reducing prokaryotes in the environment
A Loy et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2002)
Diversity of ammonia monooxygenase operon in autotrophic ammonia-oxidizing bacteria
JM Norton et al.
ARCHIVES OF MICROBIOLOGY (2002)
Gross vs net rates of N mineralization and nitrification as indicators of functional differences between forest types
LV Verchot et al.
SOIL BIOLOGY & BIOCHEMISTRY (2001)
Ammonia-oxidizing bacteria: A model for molecular microbial ecology
GA Kowalchuk et al.
ANNUAL REVIEW OF MICROBIOLOGY (2001)
Natural assemblages of marine proteobacteria and members of the Cytophaga-Flavobacter cluster consuming low- and high-molecular-weight dissolved organic matter
MT Cottrell et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2000)
分享论文
