4.8 Article

Open Targets Platform: supporting systematic drug-target identification and prioritisation

期刊

NUCLEIC ACIDS RESEARCH
卷 49, 期 D1, 页码 D1302-D1310

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OXFORD UNIV PRESS
DOI: 10.1093/nar/gkaa1027

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  1. Open Targets

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The Open Targets Platform provides a queryable knowledgebase and user interface for systematic target identification and prioritization for drug discovery, continuously improving evidence for target-disease relationships from various data sources. They have developed a new evidence scoring framework, added evaluation of post-marketing adverse drug reactions and target tractability, and optimized user interface and backend technologies to address the challenge of developing effective and safe drugs.
The Open Targets Platform (https://www.targetvalidation.org/) provides users with a queryable knowledgebase and user interface to aid systematic target identification and prioritisation for drug discovery based upon underlying evidence. It is publicly available and the underlying code is open source. Since our last update two years ago, we have had 10 releases to maintain and continuously improve evidence for target-disease relationships from 20 different data sources. In addition, we have integrated new evidence from key datasets, including prioritised targets identified from genome-wide CRISPR knockout screens in 300 cancer models (Project Score), and GWAS/UK BioBank statistical genetic analysis evidence from the Open Targets Genetics Portal. We have evolved our evidence scoring framework to improve target identification. To aid the prioritisation of targets and inform on the potential impact of modulating a given target, we have added evaluation of post-marketing adverse drug reactions and new curated information on target tractability and safety. We have also developed the user interface and backend technologies to improve performance and usability. In this article, we describe the latest enhancements to the Platform, to address the fundamental challenge that developing effective and safe drugs is difficult and expensive.

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