相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Scalable and cost-effective ribonuclease-based rRNA depletion for transcriptomics
Yiming Huang et al.
NUCLEIC ACIDS RESEARCH (2020)
A Simple, Cost-Effective, and Robust Method for rRNA Depletion in RNA-Sequencing Studies
Peter H. Culviner et al.
mBio (2020)
Nuclease-mediated depletion biases in ribosome footprint profiling libraries
Boris Zinshteyn et al.
RNA (2020)
Ribo-Pop: simple, cost-effective, and widely applicable ribosomal RNA depletion
Mary Kay Thompson et al.
RNA (2020)
A reverse-transcription/RNase H based protocol for depletion of mosquito ribosomal RNA facilitates viral intrahost evolution analysis, transcriptomics and pathogen discovery
Joseph R. Fauver et al.
VIROLOGY (2019)
Efficient and specific oligo-based depletion of rRNA
Amelie J. Kraus et al.
SCIENTIFIC REPORTS (2019)
Comprehensive comparative analysis of 5'-end RNA-sequencing methods
Xian Adiconis et al.
NATURE METHODS (2018)
Reference gene identification and validation for quantitative real-time PCR studies in developing &ITXenopus laevis &IT
Bilal B. Mughal et al.
SCIENTIFIC REPORTS (2018)
Evaluation of two main RNA-seq approaches for gene quantification in clinical RNA sequencing: polyA plus selection versus rRNA depletion
Shanrong Zhao et al.
SCIENTIFIC REPORTS (2018)
Linking maternal and somatic 5S rRNA types with different sequence-specific non-LTR retrotransposons
Mauro D. Locati et al.
RNA (2017)
Expression of distinct maternal and somatic 5.8S, 18S, and 28S rRNA types during zebrafish development
Mauro D. Locati et al.
RNA (2017)
A comprehensive assessment of RNA-seq protocols for degraded and low-quantity samples
Sven Schuierer et al.
BMC GENOMICS (2017)
Genome evolution in the allotetraploid frog Xenopus laevis
Adam M. Session et al.
NATURE (2016)
HistoneDB 2.0: a histone database with variants-an integrated resource to explore histones and their variants
Eli J. Draizen et al.
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION (2016)
The use of exome capture RNA-seq for highly degraded RNA with application to clinical cancer sequencing
Marcin Cieslik et al.
GENOME RESEARCH (2015)
HISAT: a fast spliced aligner with low memory requirements
Daehwan Kim et al.
NATURE METHODS (2015)
Zygotic Genome Activation During the Maternal-to-Zygotic Transition
Miler T. Lee et al.
ANNUAL REVIEW OF CELL AND DEVELOPMENTAL BIOLOGY, VOL 30 (2014)
featureCounts: an efficient general purpose program for assigning sequence reads to genomic features
Yang Liao et al.
BIOINFORMATICS (2014)
High-resolution analysis of gene activity during the Xenopus mid-blastula transition
Clara Collart et al.
DEVELOPMENT (2014)
A genome-wide survey of maternal and embryonic transcripts during Xenopus tropicalis development
Sarita S. Paranjpe et al.
BMC GENOMICS (2013)
Identification of the zebrafish maternal and paternal transcriptomes
Steven A. Harvey et al.
DEVELOPMENT (2013)
Comparative analysis of RNA sequencing methods for degraded or low-input samples
Xian Adiconis et al.
NATURE METHODS (2013)
Selective Depletion of rRNA Enables Whole Transcriptome Profiling of Archival Fixed Tissue
John D. Morlan et al.
PLOS ONE (2012)
Duplex-specific nuclease efficiently removes rRNA for prokaryotic RNA-seq
Hana Yi et al.
NUCLEIC ACIDS RESEARCH (2011)
Genomewide characterization of non-polyadenylated RNAs
Li Yang et al.
GENOME BIOLOGY (2011)
BEDTools: a flexible suite of utilities for comparing genomic features
Aaron R. Quinlan et al.
BIOINFORMATICS (2010)
Next generation sequencing of microbial transcriptomes: challenges and opportunities
Arnoud H. M. van Vliet
FEMS MICROBIOLOGY LETTERS (2010)
BLAST plus : architecture and applications
Christiam Camacho et al.
BMC BIOINFORMATICS (2009)
RNA-Seq: a revolutionary tool for transcriptomics
Zhong Wang et al.
NATURE REVIEWS GENETICS (2009)
Genome-Wide Analysis in Vivo of Translation with Nucleotide Resolution Using Ribosome Profiling
Nicholas T. Ingolia et al.
SCIENCE (2009)
Metabolism and regulation of canonical histone mRNAs: life without a poly(A) tail
William F. Marzluff et al.
NATURE REVIEWS GENETICS (2008)
OligoCalc: an online oligonucleotide properties calculator
Warren A. Kibbe
NUCLEIC ACIDS RESEARCH (2007)
The highways and byways of mRNA decay
Nicole L. Garneau et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2007)
Sequencing Medicago truncatula expressed sequenced tags using 454 Life Sciences technology
Foo Cheung et al.
BMC GENOMICS (2006)
MUSCLE: multiple sequence alignment with high accuracy and high throughput
RC Edgar
NUCLEIC ACIDS RESEARCH (2004)
Simple cDNA normalization using kamchatka crab duplex-specific nuclease
PA Zhulidov et al.
NUCLEIC ACIDS RESEARCH (2004)
SMART amplification combined with cDNA size fractionation in order to obtain large full-length clones
R Wellenreuther et al.
BMC GENOMICS (2004)
The human genome browser at UCSC
WJ Kent et al.
GENOME RESEARCH (2002)
分享论文
