相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。The strength and pattern of natural selection on gene expression in rice
Simon C. Groen et al.
NATURE (2020)
Hurricane effects on Neotropical lizards span geographic and phylogenetic scales
Colin M. Donihue et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2020)
QuantSeq 3′ mRNA sequencing for RNA quantification
Pamela Moll et al.
NATURE METHODS (2018)
Parasite infection and decreased thermal tolerance: impact of proliferative kidney disease on a wild salmonid fish in the context of climate change
Matthieu Bruneaux et al.
FUNCTIONAL ECOLOGY (2017)
A survey of the distribution of the PKD-parasite Tetracapsuloides bryosalmonae (Cnidaria: Myxozoa: Malacosporea) in salmonids in Norwegian rivers - additional information gleaned from formerly collected fish
T. A. Mo et al.
JOURNAL OF FISH DISEASES (2017)
A unified measure of linear and nonlinear selection on quantitative traits
Jonathan M. Henshaw et al.
METHODS IN ECOLOGY AND EVOLUTION (2017)
ranger: A Fast Implementation of Random Forests for High Dimensional Data in C plus plus and R
Marvin N. Wright et al.
JOURNAL OF STATISTICAL SOFTWARE (2017)
Winter storms drive rapid phenotypic, regulatory, and genomic shifts in the green anole lizard
Shane C. Campbell-Staton et al.
SCIENCE (2017)
Precipitation drives global variation in natural selection
Adam M. Siepielski et al.
SCIENCE (2017)
Microsporidia infection impacts the host cell's cycle and reduces host cell apoptosis
Raquel Martin-Hernandez et al.
PLOS ONE (2017)
rentrez: An R package for the NCBI eUtils API
David J. Winter
R JOURNAL (2017)
Quantitative Genetic Variation in, and Environmental Effects on, Pathogen Resistance and Temperature-Dependent Disease Severity in a Wild Trout
Paul Vincent Debes et al.
AMERICAN NATURALIST (2017)
First record of proliferative kidney disease agent Tetracapsuloides bryosalmonae in wild brown trout and European grayling in Finland
Anti Vasemagi et al.
DISEASES OF AQUATIC ORGANISMS (2017)
Evaluation of TagSeq, a reliable low-cost alternative for RNAseq
Brian K. Lohman et al.
MOLECULAR ECOLOGY RESOURCES (2016)
The Atlantic salmon genome provides insights into rediploidization
Sigbjorn Lien et al.
NATURE (2016)
Possible mechanisms of host resistance to Haemonchus contortus infection in sheep breeds native to the Canary Islands
Zhengyu Guo et al.
SCIENTIFIC REPORTS (2016)
Longitudinal RNA-Seq Analysis of Vertebrate Aging Identifies Mitochondrial Complex I as a Small-Molecule-Sensitive Modifier of Lifespan
Mario Baumgart et al.
CELL SYSTEMS (2016)
StringTie enables improved reconstruction of a transcriptome from RNA-seq reads
Mihaela Pertea et al.
NATURE BIOTECHNOLOGY (2015)
HISAT: a fast spliced aligner with low memory requirements
Daehwan Kim et al.
NATURE METHODS (2015)
limma powers differential expression analyses for RNA-sequencing and microarray studies
Matthew E. Ritchie et al.
NUCLEIC ACIDS RESEARCH (2015)
STRING v10: protein-protein interaction networks, integrated over the tree of life
Damian Szklarczyk et al.
NUCLEIC ACIDS RESEARCH (2015)
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger et al.
BIOINFORMATICS (2014)
Proliferative kidney disease (PKD) agent Tetracapsuloides bryosalmonae in brown trout populations in Estonia
Megha Dash et al.
DISEASES OF AQUATIC ORGANISMS (2014)
voom: precision weights unlock linear model analysis tools for RNA-seq read counts
Charity W. Law et al.
GENOME BIOLOGY (2014)
Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2
Michael I. Love et al.
GENOME BIOLOGY (2014)
The mucosal immune system of fish: The evolution of tolerating commensals while fighting pathogens
Daniela Gomez et al.
FISH & SHELLFISH IMMUNOLOGY (2013)
Gene expression drives local adaptation in humans
Hunter B. Fraser
GENOME RESEARCH (2013)
Phylogenetic Analysis of Gene Expression
Casey W. Dunn et al.
INTEGRATIVE AND COMPARATIVE BIOLOGY (2013)
Software for Computing and Annotating Genomic Ranges
Michael Lawrence et al.
PLOS COMPUTATIONAL BIOLOGY (2013)
The sva package for removing batch effects and other unwanted variation in high-throughput experiments
Jeffrey T. Leek et al.
BIOINFORMATICS (2012)
Tetracapsuloides bryosalmonae and PKD in juvenile wild salmonids in Denmark
Alf Skovgaard et al.
DISEASES OF AQUATIC ORGANISMS (2012)
Comparative studies of gene expression and the evolution of gene regulation
Irene Gallego Romero et al.
NATURE REVIEWS GENETICS (2012)
Uses and Implications of Field Disease Data for Livestock Genomic and Genetics Studies
Stephen C. Bishop et al.
Frontiers in Genetics (2012)
Novel methods for quantifying individual host response to infectious pathogens for genetic analyses
Andrea B. Doeschl-Wilson et al.
Frontiers in Genetics (2012)
Life cycle complexity, environmental change and the emerging status of salmonid proliferative kidney disease
Beth Okamura et al.
FRESHWATER BIOLOGY (2011)
Fitness consequences of immune responses: strengthening the empirical framework for ecoimmunology
Andrea L. Graham et al.
FUNCTIONAL ECOLOGY (2011)
Climate change and evolutionary adaptation
Ary A. Hoffmann et al.
NATURE (2011)
Genomic Signatures Predict Migration and Spawning Failure in Wild Canadian Salmon
Kristina M. Miller et al.
SCIENCE (2011)
Discriminant analysis of principal components: a new method for the analysis of genetically structured populations
Thibaut Jombart et al.
BMC GENETICS (2010)
COLONY: a program for parentage and sibship inference from multilocus genotype data
Owen R. Jones et al.
MOLECULAR ECOLOGY RESOURCES (2010)
Evidence for widespread adaptive evolution of gene expression in budding yeast
Hunter B. Fraser et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Animal performance and stress: responses and tolerance limits at different levels of biological organisation
Karin S. Kassahn et al.
BIOLOGICAL REVIEWS (2009)
GOrilla: a tool for discovery and visualization of enriched GO terms in ranked gene lists
Eran Eden et al.
BMC BIOINFORMATICS (2009)
It's about time: the temporal dynamics of phenotypic selection in the wild
Adam M. Siepielski et al.
ECOLOGY LETTERS (2009)
Proliferative kidney disease (PKD) of rainbow trout: temperature- and time-related changes of Tetracapsuloides bryosalmonae DNA in the kidney
K. Bettge et al.
PARASITOLOGY (2009)
adegenet:: a R package for the multivariate analysis of genetic markers
Thibaut Jombart
BIOINFORMATICS (2008)
WGCNA: an R package for weighted correlation network analysis
Peter Langfelder et al.
BMC BIOINFORMATICS (2008)
A modular analysis framework for blood genomics studies: Application to systemic lupus erythematosus
Damien Chaussabel et al.
IMMUNITY (2008)
Human influences on rates of phenotypic change in wild animal populations
Andrew P. Hendry et al.
MOLECULAR ECOLOGY (2008)
Genetics of gene expression and its effect on disease
Valur Emilsson et al.
NATURE (2008)
Patterns and power of phenotypic selection in nature
Joel G. Kingsolver et al.
BIOSCIENCE (2007)
Natural selection on gene expression
Yoav Gilad et al.
TRENDS IN GENETICS (2006)
Temperature-driven proliferation of Tetracapsuloides bryosalmonae in bryozoan hosts portends salmonid declines
S. Tops et al.
DISEASES OF AQUATIC ORGANISMS (2006)
Consequences of climatic change for water temperature and brown trout populations in Alpine rivers and streams
RE Hari et al.
GLOBAL CHANGE BIOLOGY (2006)
Comprehensive algorithm for quantitative real-time polymerase chain reaction
S Zhao et al.
JOURNAL OF COMPUTATIONAL BIOLOGY (2005)
Application of genome-wide expression analysis to human health and disease
JP Cobb et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Development of proliferative kidney disease in rainbow trout, Oncorhynchus mykiss (Walbaum), following short-term exposure to Tetracapsula bryosalmonae infected bryozoans
M Longshaw et al.
JOURNAL OF FISH DISEASES (2002)
The strength of phenotypic selection in natural populations
JG Kingsolver et al.
AMERICAN NATURALIST (2001)