4.7 Article

A Multi-Omics Characterization of the Natural Product Potential of Tropical Filamentous Marine Cyanobacteria

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

A computational framework to explore large-scale biosynthetic diversity

Jorge C. Navarro-Munoz et al.

NATURE CHEMICAL BIOLOGY (2020)

Article Biochemical Research Methods

Heterologous Expression of Cryptomaldamide in a Cyanobacterial Host

Arnaud Taton et al.

ACS SYNTHETIC BIOLOGY (2020)

Article Chemistry, Multidisciplinary

Nature's Combinatorial Biosynthesis Produces Vatiamides A-F

Nathan A. Moss et al.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2019)

Article Biochemistry & Molecular Biology

antiSMASH 5.0: updates to the secondary metabolite genome mining pipeline

Kai Blin et al.

NUCLEIC ACIDS RESEARCH (2019)

Article Biochemistry & Molecular Biology

MolNetEnhancer: Enhanced Molecular Networks by Integrating Metabolome Mining and Annotation Tools

Madeleine Ernst et al.

METABOLITES (2019)

Review Biochemistry & Molecular Biology

Marine natural products

John W. Blunt et al.

NATURAL PRODUCT REPORTS (2018)

Article Biochemical Research Methods

Propagating annotations of molecular networks using in silico fragmentation

Ricardo R. da Silva et al.

PLOS COMPUTATIONAL BIOLOGY (2018)

Article Multidisciplinary Sciences

Dereplication of microbial metabolites through database search of mass spectra

Hosein Mohimani et al.

NATURE COMMUNICATIONS (2018)

Article Biochemistry & Molecular Biology

Effect of UV-B Radiation and Desiccation Stress on Photoprotective Compounds Accumulation in Marine Leptolyngbya sp.

Devika Joshi et al.

APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY (2018)

Article Biochemistry & Molecular Biology

metaSPAdes: a new versatile metagenomic assembler

Sergey Nurk et al.

GENOME RESEARCH (2017)

Article Biochemistry & Molecular Biology

Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation

Sergey Koren et al.

GENOME RESEARCH (2017)

Article Biochemical Research Methods

ModelFinder: fast model selection for accurate phylogenetic estimates

Subha Kalyaanamoorthy et al.

NATURE METHODS (2017)

Article Multidisciplinary Sciences

Comparative genomics uncovers the prolific and distinctive metabolic potential of the cyanobacterial genus Moorea

Tiago Leao et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2017)

Article Multidisciplinary Sciences

Retrospective analysis of natural products provides insights for future discovery trends

Cameron R. Pye et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2017)

Article Biochemical Research Methods

Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads

Ryan R. Wick et al.

PLOS COMPUTATIONAL BIOLOGY (2017)

Review Microbiology

A Metagenomic Approach to Cyanobacterial Genomics

Danillo O. Alvarenga et al.

FRONTIERS IN MICROBIOLOGY (2017)

Review Plant Sciences

Natural Products as Sources of New Drugs from 1981 to 2014

David J. Newman et al.

JOURNAL OF NATURAL PRODUCTS (2016)

Article Biotechnology & Applied Microbiology

Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking

Mingxun Wang et al.

NATURE BIOTECHNOLOGY (2016)

Article Chemistry, Multidisciplinary

ClassyFire: automated chemical classification with a comprehensive, computable taxonomy

Yannick Djoumbou Feunang et al.

JOURNAL OF CHEMINFORMATICS (2016)

Article Biotechnology & Applied Microbiology

Mash: fast genome and metagenome distance estimation using MinHash

Brian D. Ondov et al.

GENOME BIOLOGY (2016)

Article Biochemical Research Methods

MEDUSA: a multi-draft based scaffolder

Emanuele Bosi et al.

BIOINFORMATICS (2015)

Article Biochemistry & Molecular Biology

CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

Donovan H. Parks et al.

GENOME RESEARCH (2015)

Article Physics, Atomic, Molecular & Chemical

Mass spectral similarity for untargeted metabolomics data analysis of complex mixtures

Neha Garg et al.

INTERNATIONAL JOURNAL OF MASS SPECTROMETRY (2015)

Editorial Material Biochemistry & Molecular Biology

Minimum Information about a Biosynthetic Gene cluster

Marnix H. Medema et al.

NATURE CHEMICAL BIOLOGY (2015)

Article Biochemistry & Molecular Biology

antiSMASH 3.0-a comprehensive resource for the genome mining of biosynthetic gene clusters

Tilmann Weber et al.

NUCLEIC ACIDS RESEARCH (2015)

Review Biochemistry & Molecular Biology

Natural Product Biosynthetic Diversity and Comparative Genomics of the Cyanobacteria

Elke Dittmann et al.

TRENDS IN MICROBIOLOGY (2015)

Article Biochemistry & Molecular Biology

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

Lam-Tung Nguyen et al.

MOLECULAR BIOLOGY AND EVOLUTION (2015)

Article Biochemical Research Methods

Fast and sensitive protein alignment using DIAMOND

Benjamin Buchfink et al.

NATURE METHODS (2015)

Article Biochemical Research Methods

Prokka: rapid prokaryotic genome annotation

Torsten Seemann

BIOINFORMATICS (2014)

Article Biotechnology & Applied Microbiology

Phylum-wide comparative genomics unravel the diversity of secondary metabolism in Cyanobacteria

Alexandra Calteau et al.

BMC GENOMICS (2014)

Article Biochemical Research Methods

QUAST: quality assessment tool for genome assemblies

Alexey Gurevich et al.

BIOINFORMATICS (2013)

Article Biochemical Research Methods

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

Salvador Capella-Gutierrez et al.

BIOINFORMATICS (2009)

Article Plant Sciences

Carriebowmide, a New Cyclodepsipeptide from the Marine Cyanobacterium Lyngbya polychroa

Sarath P. Gunasekera et al.

JOURNAL OF NATURAL PRODUCTS (2008)

Article Plant Sciences

Natural products chemistry and taxonomy of the marine cyanobacterium Blennothrix cantharidosmum

Benjamin R. Clark et al.

JOURNAL OF NATURAL PRODUCTS (2008)

Article Biotechnology & Applied Microbiology

DarkHorse: a method for genome-wide prediction of horizontal gene transfer

Sheila Podell et al.

GENOME BIOLOGY (2007)

Article Biochemistry & Molecular Biology

MUSCLE: multiple sequence alignment with high accuracy and high throughput

RC Edgar

NUCLEIC ACIDS RESEARCH (2004)

Review Chemistry, Medicinal

Recent advances in the discovery and development of stilbenes and lactones in anticancer therapy

SH Inayat-Hussain et al.

EXPERT OPINION ON THERAPEUTIC PATENTS (2004)

Article Biotechnology & Applied Microbiology

Versatile and open software for comparing large genomes

S Kurtz et al.

GENOME BIOLOGY (2004)

Article Biochemistry & Molecular Biology

Cytoscape: A software environment for integrated models of biomolecular interaction networks

P Shannon et al.

GENOME RESEARCH (2003)

Article Plant Sciences

Apramides A-G, novel lipopeptides from the marine cyanobacterium Lyngbya majuscula

H Luesch et al.

JOURNAL OF NATURAL PRODUCTS (2000)

Article Plant Sciences

Dolastatin 3 and two novel cyclic peptides from a Palauan collection of Lyngbya majuscula

SS Mitchell et al.

JOURNAL OF NATURAL PRODUCTS (2000)