4.8 Article

Environmental stress destabilizes microbial networks

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Microbiology

Microbiome Dynamics Associated With the Atacama Flowering Desert

Juan Pablo Araya et al.

FRONTIERS IN MICROBIOLOGY (2020)

Review Environmental Sciences

Soil Microbiomes Under Climate Change and Implications for Carbon Cycling

Dan Naylor et al.

ANNUAL REVIEW OF ENVIRONMENT AND RESOURCES, VOL 45 (2020)

Article Ecology

Soil Microbiomes Underlie Population Persistence of an Endangered Plant Species

Aaron S. David et al.

AMERICAN NATURALIST (2019)

Letter Biotechnology & Applied Microbiology

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

Evan Bolyen et al.

NATURE BIOTECHNOLOGY (2019)

Article Multidisciplinary Sciences

Toxicity drives facilitation between 4 bacterial species

Philippe Piccardi et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)

Article Ecology

Soil-plant compartments affect fungal microbiome diversity and composition in grapevine

Maria del Pilar Martinez-Diz et al.

FUNGAL ECOLOGY (2019)

Article Biochemistry & Molecular Biology

The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications

Rolf Henrik Nilsson et al.

NUCLEIC ACIDS RESEARCH (2019)

Article Soil Science

Co-occurrence patterns of soybean rhizosphere microbiome at a continental scale

Baogang Zhang et al.

SOIL BIOLOGY & BIOCHEMISTRY (2018)

Article Multidisciplinary Sciences

Emergent simplicity in microbial community assembly

Joshua E. Goldford et al.

SCIENCE (2018)

Article Multidisciplinary Sciences

Soil bacterial networks are less stable under drought than fungal networks

Franciska T. de Vries et al.

NATURE COMMUNICATIONS (2018)

Article Biochemistry & Molecular Biology

Microbial Interkingdom Interactions in Roots Promote Arabidopsis Survival

Paloma Duran et al.

Review Plant Sciences

Core microbiomes for sustainable agroecosystems

Hirokazu Toju et al.

NATURE PLANTS (2018)

Review Biochemistry & Molecular Biology

Disentangling Interactions in the Microbiome: A Network Perspective

Mehdi Layeghifard et al.

TRENDS IN MICROBIOLOGY (2017)

Article Microbiology

Stress and stability: applying the Anna Karenina principle to animal microbiomes

Jesse R. Zaneveld et al.

NATURE MICROBIOLOGY (2017)

Article Multidisciplinary Sciences

Plankton networks driving carbon export in the oligotrophic ocean

Lionel Guidi et al.

NATURE (2016)

Article Biotechnology & Applied Microbiology

Systematic improvement of amplicon marker gene methods for increased accuracy in microbiome studies

Daryl M. Gohl et al.

NATURE BIOTECHNOLOGY (2016)

Article Multidisciplinary Sciences

Intestinal microbiome analyses identify melanoma patients at risk for checkpoint-blockade-induced colitis

Krista Dubin et al.

NATURE COMMUNICATIONS (2016)

Article Biochemistry & Molecular Biology

Microbial Hub Taxa Link Host and Abiotic Factors to Plant Microbiome Variation

Matthew T. Agler et al.

PLOS BIOLOGY (2016)

Article Multidisciplinary Sciences

Metabolic dependencies drive species co-occurrence in diverse microbial communities

Aleksej Zelezniak et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)

Article Multidisciplinary Sciences

The ecology of the microbiome: Networks, competition, and stability

Katharine Z. Coyte et al.

SCIENCE (2015)

Article Biochemistry & Molecular Biology

Rhizosphere Microbes as Essential Partners for Plant Stress Tolerance

Axel de Zelicourt et al.

MOLECULAR PLANT (2013)

Article Ecology

Fungal Symbionts Alter Plant Drought Response

Elise R. Worchel et al.

MICROBIAL ECOLOGY (2013)

Article Biochemical Research Methods

Ecological Modeling from Time-Series Inference: Insight into Dynamics and Stability of Intestinal Microbiota

Richard R. Stein et al.

PLOS COMPUTATIONAL BIOLOGY (2013)

Article Multidisciplinary Sciences

Diversity of Interaction Types and Ecological Community Stability

A. Mougi et al.

SCIENCE (2012)

Article Biochemical Research Methods

Microbial Co-occurrence Relationships in the Human Microbiome

Karoline Faust et al.

PLOS COMPUTATIONAL BIOLOGY (2012)

Article Biochemical Research Methods

Inferring Correlation Networks from Genomic Survey Data

Jonathan Friedman et al.

PLOS COMPUTATIONAL BIOLOGY (2012)

Article Multidisciplinary Sciences

Compartmentalization increases food-web persistence

Daniel B. Stouffer et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Biochemistry & Molecular Biology

A global network of coexisting microbes from environmental and whole-genome sequence data

Samuel Chaffron et al.

GENOME RESEARCH (2010)

Review Ecology

Mycorrhizal Symbioses and Plant Invasions

Anne Pringle et al.

ANNUAL REVIEW OF ECOLOGY EVOLUTION AND SYSTEMATICS (2009)

Article Ecology

Lack of belowground mutualisms hinders Pinaceae invasions

Martin A. Nunez et al.

ECOLOGY (2009)

Article Multidisciplinary Sciences

The modularity of pollination networks

Jens M. Olesen et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Ecology

Toward an ecological classification of soil bacteria

Noah Fierer et al.

ECOLOGY (2007)

Article Multidisciplinary Sciences

Soil biota and exotic plant invasion

RM Callaway et al.

NATURE (2004)

Article Physics, Fluids & Plasmas

Finding and evaluating community structure in networks

MEJ Newman et al.

PHYSICAL REVIEW E (2004)

Article Physics, Fluids & Plasmas

Finding community structure in very large networks

A Clauset et al.

PHYSICAL REVIEW E (2004)