相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Reclassification of the Clostridium clostridioforme and Clostridium sphenoides clades as Enterocloster gen. nov. and Lacrimispora gen. nov., including reclassification of 15 taxa
Kelly N. Haas et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2020)
Faecalibacillus intestinalis gen. nov., sp. nov. and Faecalibacillus faecis sp. nov., isolated from human faeces
Boram Seo et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2019)
UBCG: Up-to-date bacterial core gene set and pipeline for phylogenomic tree reconstruction
Seong-In Na et al.
JOURNAL OF MICROBIOLOGY (2018)
Current understanding of the human microbiome
Jack A. Gilbert et al.
NATURE MEDICINE (2018)
Culturing the human microbiota and culturomics'
Jean-Christophe Lagier et al.
NATURE REVIEWS MICROBIOLOGY (2018)
Clostridium pabulibutyricum sp nov., a butyric-acid-producing organism isolated from high-moisture grass silage
Hisami Kobayashi et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2017)
Introducing EzBioCloud: a taxonomically united database of 16S rRNA gene sequences and whole-genome assemblies
Seok-Hwan Yoon et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2017)
A large-scale evaluation of algorithms to calculate average nucleotide identity
Seok-Hwan Yoon et al.
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY (2017)
Gut biogeography of the bacterial microbiota
Gregory P. Donaldson et al.
NATURE REVIEWS MICROBIOLOGY (2016)
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
Sudhir Kumar et al.
MOLECULAR BIOLOGY AND EVOLUTION (2016)
Culturing of 'unculturable' human microbiota reveals novel taxa and extensive sporulation
Hilary P. Browne et al.
NATURE (2016)
Culture of previously uncultured members of the human gut microbiota by culturomics
Jean-Christophe Lagier et al.
NATURE MICROBIOLOGY (2016)
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes
Donovan H. Parks et al.
GENOME RESEARCH (2015)
A5-miseq: an updated pipeline to assemble microbial genomes from Illumina MiSeq data
David Coil et al.
BIOINFORMATICS (2015)
Fast and sensitive protein alignment using DIAMOND
Benjamin Buchfink et al.
NATURE METHODS (2015)
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
Alexandros Stamatakis
BIOINFORMATICS (2014)
EzEditor: a versatile sequence alignment editor for both rRNA- and protein-coding genes
Yoon-Seong Jeon et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2014)
Towards a taxonomic coherence between average nucleotide identity and 16S rRNA gene sequence similarity for species demarcation of prokaryotes
Mincheol Kim et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2014)
A Proposed Genus Boundary for the Prokaryotes Based on Genomic Insights
Qi-Long Qin et al.
JOURNAL OF BACTERIOLOGY (2014)
Uniting the classification of cultured and uncultured bacteria and archaea using 16S rRNA gene sequences
Pablo Yarza et al.
NATURE REVIEWS MICROBIOLOGY (2014)
Bacteroides thetaiotaomicron and Faecalibacterium prausnitzii influence the production of mucus glycans and the development of goblet cells in the colonic epithelium of a gnotobiotic model rodent
Laura Wrzosek et al.
BMC BIOLOGY (2013)
A genomic update on clostridial phylogeny: Gram-negative spore formers and other misplaced clostridia
Natalya Yutin et al.
ENVIRONMENTAL MICROBIOLOGY (2013)
Commensal microbe-derived butyrate induces the differentiation of colonic regulatory T cells
Yukihiro Furusawa et al.
NATURE (2013)
Introducing EzTaxon-e: a prokaryotic 16S rRNA gene sequence database with phylotypes that represent uncultured species
Ok-Sun Kim et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2012)
Notes on the characterization of prokaryote strains for taxonomic purposes
B. J. Tindall et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2010)
Diversity, metabolism and microbial ecology of butyrate-producing bacteria from the human large intestine
Petra Louis et al.
FEMS MICROBIOLOGY LETTERS (2009)
The RAST server: Rapid annotations using subsystems technology
Ramy K. Aziz et al.
BMC GENOMICS (2008)
MrBayes 3: Bayesian phylogenetic inference under mixed models
F Ronquist et al.
BIOINFORMATICS (2003)
Taxonomy - General comments and update on taxonomy of clostridia and anaerobic cocci
SM Finegold et al.
ANAEROBE (2002)
分享论文
