4.0 Article

1H, 13C and 15N backbone chemical shift assignments of SARS-CoV-2 nsp3a

期刊

BIOMOLECULAR NMR ASSIGNMENTS
卷 15, 期 1, 页码 173-176

出版社

SPRINGER
DOI: 10.1007/s12104-020-10001-8

关键词

SARS-CoV-2; Intrinsically disordered protein; Covid-19; Viral replication

资金

  1. FRISBI [ANR-10-INBS-05-02]
  2. University Grenoble Alpes graduate school (Ecoles Universitaires de Recherche) CBH-EUR-GS [ANR-17-EURE-0003]
  3. state of Hesse
  4. German research foundation [CRC902]

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This study reports the backbone resonance assignment of two domains of the non-structural protein nsp3a from SARS-CoV-2, aiming to provide a basis for identifying inhibitors and further functional and interaction studies of this crucial protein. The research is conducted within the international covid19-nmr consortium, which focuses on characterizing SARS-CoV-2 proteins and RNAs.
The non-structural protein nsp3 from SARS-CoV-2 plays an essential role in the viral replication transcription complex. Nsp3a constitutes the N-terminal domain of nsp3, comprising a ubiquitin-like folded domain and a disordered acidic chain. This region of nsp3a has been linked to interactions with the viral nucleoprotein and the structure of double membrane vesicles. Here, we report the backbone resonance assignment of both domains of nsp3a. The study is carried out in the context of the international covid19-nmr consortium, which aims to characterize SARS-CoV-2 proteins and RNAs, providing for example NMR chemical shift assignments of the different viral components. Our assignment will provide the basis for the identification of inhibitors and further functional and interaction studies of this essential protein.

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