4.7 Article

RCSB Protein Data Bank 1D tools and services

期刊

BIOINFORMATICS
卷 36, 期 22-23, 页码 5526-5527

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OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btaa1012

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资金

  1. National Science Foundation [DBI-1832184]
  2. US Department of Energy [DE-SC0019749]
  3. National Cancer Institute, National Institute of Allergy and Infectious Diseases
  4. National Institute of General Medical Sciences of the National Institutes of Health [R01GM133198]

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Motivation: Interoperability between polymer sequences and structural data is essential for providing a complete picture of protein and gene features and helping to understand biomolecular function. Results: Herein, we present two resources designed to improve interoperability between the RCSB Protein Data Bank, the NCBI and the UniProtKB data resources and visualize integrated data therefrom. The underlying tools provide a flexible means of mapping between the different coordinate spaces and an interactive tool allows convenient visualization of the 1-dimensional data over the web.

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