4.6 Article

Plastome phylogenomics of Cephalotaxus (Cephalotaxaceae) and allied genera

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

Testing and using complete plastomes and ribosomal DNA sequences as the next generation DNA barcodes in Panax (Araliaceae)

Yunheng Ji et al.

MOLECULAR ECOLOGY RESOURCES (2019)

Article Evolutionary Biology

RNAseq-based phylogenetic reconstruction of Taxaceae and Cephalotaxaceae

Aasim Majeed et al.

CLADISTICS (2019)

Article Plant Sciences

Plastome phylogenomic analysis of Torreya (Taxaceae)

Xu Zhang et al.

JOURNAL OF SYSTEMATICS AND EVOLUTION (2019)

Article Plant Sciences

Origin of angiosperms and the puzzle of the Jurassic gap

Hong-Tao Li et al.

NATURE PLANTS (2019)

Article Biochemistry & Molecular Biology

Resolving the systematic positions of enigmatic taxa: Manipulating the chloroplast genome data of Saxifragales

Wenpan Dong et al.

MOLECULAR PHYLOGENETICS AND EVOLUTION (2018)

Article Evolutionary Biology

Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7

Andrew Rambaut et al.

SYSTEMATIC BIOLOGY (2018)

Article Plant Sciences

An overview of extant conifer evolution from the perspective of the fossil record

Andrew B. Leslie et al.

AMERICAN JOURNAL OF BOTANY (2018)

Article Biochemistry & Molecular Biology

Resolving the rapid plant radiation of early diverging lineages in the tropical Zingiberales: Pushing the limits of genomic data

Monica M. Carlsen et al.

MOLECULAR PHYLOGENETICS AND EVOLUTION (2018)

Article Multidisciplinary Sciences

Evolutionary history of the angiosperm flora of China

Li-Min Lu et al.

NATURE (2018)

Article Biochemistry & Molecular Biology

Phylogenetic relationships of Burmeistera (Campanulaceae: Lobelioideae): Combining whole plastome with targeted loci data in a recent radiation

Simon Uribe-Convers et al.

MOLECULAR PHYLOGENETICS AND EVOLUTION (2017)

Article Plant Sciences

Resolving basal lamiid phylogeny and the circumscription of Icacinaceae with a plastome-scale data set

Gregory W. Stull et al.

AMERICAN JOURNAL OF BOTANY (2015)

Article Biochemistry & Molecular Biology

Does complete plastid genome sequencing improve species discrimination and phylogenetic resolution in Araucaria?

Markus Ruhsam et al.

MOLECULAR ECOLOGY RESOURCES (2015)

Article Biochemistry & Molecular Biology

Mitochondrial introgression and complex biogeographic history of the genus Picea

Jin-Hua Ran et al.

MOLECULAR PHYLOGENETICS AND EVOLUTION (2015)

Article Biochemistry & Molecular Biology

Molecular phylogenetics and evolutionary history of sect. Quinquefoliae (Pinus): Implications for Northern Hemisphere biogeography

Zhen-Zhen Hao et al.

MOLECULAR PHYLOGENETICS AND EVOLUTION (2015)

Article Plant Sciences

Cladistic analysis of Taxaceae s. l.

Balkrishna Ghimire et al.

PLANT SYSTEMATICS AND EVOLUTION (2014)

Article Biochemical Research Methods

BEAST 2: A Software Platform for Bayesian Evolutionary Analysis

Remco Bouckaert et al.

PLOS COMPUTATIONAL BIOLOGY (2014)

Review Genetics & Heredity

Evolutionary diversificatons of plants on the Qinghai-Tibetan Plateau

Jun Wen et al.

FRONTIERS IN GENETICS (2014)

Article Biochemistry & Molecular Biology

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

Kazutaka Katoh et al.

MOLECULAR BIOLOGY AND EVOLUTION (2013)

Article Plant Sciences

A taxonomic revision of the genus Cephalotaxus (Taxaceae)

Xue-Dong Lang et al.

PHYTOTAXA (2013)

Article Multidisciplinary Sciences

NGS QC Toolkit: A Toolkit for Quality Control of Next Generation Sequencing Data

Ravi K. Patel et al.

PLOS ONE (2012)

Article Geography, Physical

Quantitative reconstruction of Miocene climate patterns and evolution in Southern China based on plant fossils

Yi-Feng Yao et al.

PALAEOGEOGRAPHY PALAEOCLIMATOLOGY PALAEOECOLOGY (2011)

Article Geography, Physical

Quantitative reconstruction of the Late Miocene monsoon climates of southwest China: A case study of the Lincang flora from Yunnan Province

Frederic M. B. Jacques et al.

PALAEOGEOGRAPHY PALAEOCLIMATOLOGY PALAEOECOLOGY (2011)

Article Multidisciplinary Sciences

Recent Synchronous Radiation of a Living Fossil

N. S. Nagalingum et al.

SCIENCE (2011)

Article Plant Sciences

A new classification and linear sequence of extant gymnosperms

Maarten J. M. Christenhusz et al.

PHYTOTAXA (2011)

Article Biochemistry & Molecular Biology

Resolving Difficult Phylogenetic Questions: Why More Sequences Are Not Enough

Herve Philippe et al.

PLOS BIOLOGY (2011)

Article Multidisciplinary Sciences

progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement

Aaron E. Darling et al.

PLOS ONE (2010)

Article Plant Sciences

A new Cephalotaxus and associated epiphyllous fungi from the Oligocene of Guangxi, South China

Gongle Shi et al.

REVIEW OF PALAEOBOTANY AND PALYNOLOGY (2010)

Review Plant Sciences

Eastern Asian endemic seed plant genera and their paleogeographic history throughout the Northern Hemisphere

Steven R. Manchester et al.

JOURNAL OF SYSTEMATICS AND EVOLUTION (2009)

Article Multidisciplinary Sciences

An early Cenozoic perspective on greenhouse warming and carbon-cycle dynamics

James C. Zachos et al.

NATURE (2008)

Article Geography, Physical

Development of the East Asian monsoon: Mineralogical and sedimentologic records in the northern South China Sea since 20 Ma

Shiming Wan et al.

PALAEOGEOGRAPHY PALAEOCLIMATOLOGY PALAEOECOLOGY (2007)

Review Ecology

Deciphering ancient rapid radiations

James B. Whitfield et al.

TRENDS IN ECOLOGY & EVOLUTION (2007)

Article Biochemical Research Methods

RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

Alexandros Stamatakis

BIOINFORMATICS (2006)

Article Biochemistry & Molecular Biology

Molecular phylogeny and biogeography of Picea (Pinaceae):: Implications for phylogeographical studies using cytoplasmic haplotypes

Jin-Hua Ran et al.

MOLECULAR PHYLOGENETICS AND EVOLUTION (2006)

Review Geography, Physical

How old is the Asian monsoon system? Palaeobotanical records from China

XJ Sun et al.

PALAEOGEOGRAPHY PALAEOCLIMATOLOGY PALAEOECOLOGY (2005)

Article Biochemistry & Molecular Biology

The tRNAscan-SE, snoscan and snoGPS web servers for the detection of tRNAs and snoRNAs

P Schattner et al.

NUCLEIC ACIDS RESEARCH (2005)

Article Biochemistry & Molecular Biology

More genes or more taxa? The relative contribution of gene number and taxon number to phylogenetic accuracy

A Rokas et al.

MOLECULAR BIOLOGY AND EVOLUTION (2005)

Article Biochemical Research Methods

Automatic annotation of organellar genomes with DOGMA

SK Wyman et al.

BIOINFORMATICS (2004)

Article Biochemistry & Molecular Biology

Recolonization and radiation in Larix (Pinaceae):: evidence from nuclear ribosomal DNA paralogues

XX Wei et al.

MOLECULAR ECOLOGY (2004)

Article Biochemical Research Methods

MrBayes 3: Bayesian phylogenetic inference under mixed models

F Ronquist et al.

BIOINFORMATICS (2003)

Article Multidisciplinary Sciences

Glacial refugia:: Hotspots but not melting pots of genetic diversity

RJ Petit et al.

SCIENCE (2003)

Review Multidisciplinary Sciences

Trends, rhythms, and aberrations in global climate 65 Ma to present

J Zachos et al.

SCIENCE (2001)

Article Biochemical Research Methods

VISTA:: visualizing global DNA sequence alignments of arbitrary length

C Mayor et al.

BIOINFORMATICS (2000)

Article Biochemistry & Molecular Biology

Phylogeny of taxaceae and cephalotaxaceae tenera inferred from chloroplast matK gene and nuclear rDNA ITS region

YC Cheng et al.

MOLECULAR PHYLOGENETICS AND EVOLUTION (2000)