相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Gossypium barbadense and Gossypium hirsutum genomes provide insights into the origin and evolution of allotetraploid cotton
Yan Hu et al.
NATURE GENETICS (2019)
Low-input chromatin profiling in Arabidopsis endosperm using CUT&RUN
Xiao-yu Zheng et al.
PLANT REPRODUCTION (2019)
CUT&Tag for efficient epigenomic profiling of small samples and single cells
Hatice S. Kaya-Okur et al.
NATURE COMMUNICATIONS (2019)
fastp: an ultra-fast all-in-one FASTQ preprocessor
Shifu Chen et al.
BIOINFORMATICS (2018)
Targeted in situ genome-wide profiling with high efficiency for low cell numbers
Peter J. Skene et al.
NATURE PROTOCOLS (2018)
Is H3K4me3 instructive for transcription activation
Francoise S. Howe et al.
BIOESSAYS (2017)
Temporal dynamics of gene expression and histone marks at the Arabidopsis shoot meristem during flowering
Yuan You et al.
NATURE COMMUNICATIONS (2017)
Epigenetic regulation and epigenomic landscape in rice
Xian Deng et al.
NATIONAL SCIENCE REVIEW (2016)
ChIPseeker: an R/Bioconductor package for ChIP peak annotation, comparison and visualization
Guangchuang Yu et al.
BIOINFORMATICS (2015)
Sequencing of allotetraploid cotton (Gossypium hirsutum L. acc. TM-1) provides a resource for fiber improvement
Tianzhen Zhang et al.
NATURE BIOTECHNOLOGY (2015)
Broad H3K4me3 is associated with increased transcription elongation and enhancer activity at tumor-suppressor genes
Kaifu Chen et al.
NATURE GENETICS (2015)
HISAT: a fast spliced aligner with low memory requirements
Daehwan Kim et al.
NATURE METHODS (2015)
deepTools: a flexible platform for exploring deep-sequencing data
Fidel Ramirez et al.
NUCLEIC ACIDS RESEARCH (2014)
Transposition of native chromatin for fast and sensitive epigenomic profiling of open chromatin, DNA-binding proteins and nucleosome position
Jason D. Buenrostro et al.
NATURE METHODS (2013)
ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia
Stephen G. Landt et al.
GENOME RESEARCH (2012)
Integrative genomics viewer
James T. Robinson et al.
NATURE BIOTECHNOLOGY (2011)
Chromatin particle spectrum analysis: a method for comparative chromatin structure analysis using paired-end mode next-generation DNA sequencing
Nicholas A. Kent et al.
NUCLEIC ACIDS RESEARCH (2011)
Genome-Wide and Organ-Specific Landscapes of Epigenetic Modifications and Their Relationships to mRNA and Small RNA Transcriptomes in Maize
Xiangfeng Wang et al.
PLANT CELL (2009)
Mapping accessible chromatin regions using Sono-Seq
Raymond K. Auerbach et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Design and analysis of ChIP-seq experiments for DNA-binding proteins
Peter V. Kharchenko et al.
NATURE BIOTECHNOLOGY (2008)
High-resolution mapping of epigenetic modifications of the rice genome uncovers interplay between DNA methylation, histone methylation, and gene expression
Xueyong Li et al.
PLANT CELL (2008)
Model-based Analysis of ChIP-Seq (MACS)
Yong Zhang et al.
GENOME BIOLOGY (2008)
FAIRE ((F)under-barormaldehyde-(A)under-barssisted (I)under-barsolation of (R)under-baregulatory (E)under-barlements) isolates active regulatory elements from human chromatin
Paul G. Giresi et al.
GENOME RESEARCH (2007)
High-resolution profiling of histone methylations in the human genome
Artern Barski et al.
CELL (2007)
Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS)
GE Crawford et al.
GENOME RESEARCH (2006)
Genome-wide map of nucleosorne acetylation and methylation in yeast
DK Pokholok et al.
CELL (2005)
Targeted recruitment of set1 histone methylase by elongating pol II provides a localized mark and memory of recent transcriptional activity
HH Ng et al.
MOLECULAR CELL (2003)
Active genes are tri-methylated at K4 of histone H3
H Santos-Rosa et al.
NATURE (2002)
Chromatin profiling using targeted DNA adenine methyltransferase
B van Steensel et al.
NATURE GENETICS (2001)