相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Animal-ImputeDB: a comprehensive database with multiple animal reference panels for genotype imputation
Wenqian Yang et al.
NUCLEIC ACIDS RESEARCH (2020)
APAatlas: decoding alternative polyadenylation across human tissues
Wei Hong et al.
NUCLEIC ACIDS RESEARCH (2020)
Database resources of the National Center for Biotechnology Information
Eric W. Sayers et al.
NUCLEIC ACIDS RESEARCH (2020)
A survey on identification and quantification of alternative polyadenylation sites from RNA-seq data
Moliang Chen et al.
BRIEFINGS IN BIOINFORMATICS (2020)
Tissue-specific mechanisms of alternative polyadenylation: Testis, brain, and beyond (2018 update)
Clinton C. MacDonald
WILEY INTERDISCIPLINARY REVIEWS-RNA (2019)
Comprehensive Characterization of Alternative Polyadenylation in Human Cancer
Yu Xiang et al.
JNCI-JOURNAL OF THE NATIONAL CANCER INSTITUTE (2018)
PolyA_DB 3 catalogs cleavage and polyadenylation sites identified by deep sequencing in multiple genomes
Ruijia Wang et al.
NUCLEIC ACIDS RESEARCH (2018)
TC3A: The Cancer 3′ UTR Atlas
Xin Feng et al.
NUCLEIC ACIDS RESEARCH (2018)
Comprehensive Characterization of Alternative Polyadenylation in Human Cancer
Yu Xiang et al.
JNCI-JOURNAL OF THE NATIONAL CANCER INSTITUTE (2018)
TAPAS: tool for alternative polyadenylation site analysis
Ashraful Arefeen et al.
BIOINFORMATICS (2018)
APAtrap: identification and quantification of alternative polyadenylation sites from RNA-seq data
Congting Ye et al.
BIOINFORMATICS (2018)
QAPA: a new method for the systematic analysis of alternative polyadenylation from RNA-seq data
Kevin C. H. Ha et al.
GENOME BIOLOGY (2018)
Analysis of alternative cleavage and polyadenylation in mature and differentiating neurons using RNA-seq data
Aysegul Guvenek et al.
QUANTITATIVE BIOLOGY (2018)
Alternative polyadenylation of mRNA precursors
Bin Tian et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2017)
Cleavage and polyadenylation: Ending the message expands gene regulation
Jonathan Neve et al.
RNA BIOLOGY (2017)
Prediction of Poly(A) Sites by Poly(A) Read Mapping
Thomas Bonfert et al.
PLOS ONE (2017)
Alternative Polyadenylation in Human Diseases
Jae-Woong Chang et al.
ENDOCRINOLOGY AND METABOLISM (2017)
Widespread Influence of 3′-End Structures on Mammalian mRNA Processing and Stability
Xuebing Wu et al.
CELL (2017)
Roar: detecting alternative polyadenylation with standard mRNA sequencing libraries
Elena Grassi et al.
BMC BIOINFORMATICS (2016)
A comprehensive analysis of 3′ end sequencing data sets reveals novel polyadenylation signals and the repressive role of heterogeneous ribonucleoprotein C on cleavage and polyadenylation
Andreas J. Gruber et al.
GENOME RESEARCH (2016)
Evolution and Biological Roles of Alternative 3′UTRs
Christine Mayr
TRENDS IN CELL BIOLOGY (2016)
HISAT: a fast spliced aligner with low memory requirements
Daehwan Kim et al.
NATURE METHODS (2015)
APASdb: a database describing alternative poly(A) sites and selection of heterogeneous cleavage sites downstream of poly(A) signals
Leiming You et al.
NUCLEIC ACIDS RESEARCH (2015)
IsoSCM: improved and alternative 3 ' UTR annotation using multiple change-point inference
Sol Shenker et al.
RNA (2015)
Dynamic analyses of alternative polyadenylation from RNA-seq reveal a 3′- UTR landscape across seven tumour types
Zheng Xia et al.
NATURE COMMUNICATIONS (2014)
Ubiquitously transcribed genes use alternative polyadenylation to achieve tissue-specific expression
Steve Lianoglou et al.
GENES & DEVELOPMENT (2013)
Widespread and extensive lengthening of 3′ UTRs in the mammalian brain
Pedro Miura et al.
GENOME RESEARCH (2013)
Analysis of alternative cleavage and polyadenylation by 3′ region extraction and deep sequencing
Mainul Hoque et al.
NATURE METHODS (2013)
Alternative cleavage and polyadenylation: extent, regulation and function
Ran Elkon et al.
NATURE REVIEWS GENETICS (2013)
Extensive alternative polyadenylation during zebrafish development
Igor Ulitsky et al.
GENOME RESEARCH (2012)
The sequence read archive: explosive growth of sequencing data
Yuichi Kodama et al.
NUCLEIC ACIDS RESEARCH (2012)
Global Patterns of Tissue-Specific Alternative Polyadenylation in Drosophila
Peter Smibert et al.
CELL REPORTS (2012)
DREME: motif discovery in transcription factor ChIP-seq data
Timothy L. Bailey
BIOINFORMATICS (2011)
Mechanisms and Consequences of Alternative Polyadenylation
Dafne Campigli Di Giammartino et al.
MOLECULAR CELL (2011)
Formation, regulation and evolution of Caenorhabditis elegans 3′UTRs
Calvin H. Jan et al.
NATURE (2011)
Genome-wide landscape of polyadenylation in Arabidopsis provides evidence for extensive alternative polyadenylation
Xiaohui Wu et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Analysis and design of RNA sequencing experiments for identifying isoform regulation
Yarden Katz et al.
NATURE METHODS (2010)
Widespread Shortening of 3′UTRs by Alternative Cleavage and Polyadenylation Activates Oncogenes in Cancer Cells
Christine Mayr et al.
CELL (2009)
Progressive lengthening of 3′ untranslated regions of mRNAs by alternative polyadenylation during mouse embryonic development
Zhe Ji et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Proliferating cells express mRNAs with shortened 3′ untranslated regions and fewer microRNA target sites
Rickard Sandberg et al.
SCIENCE (2008)
PolyA_DB 2: mRNA polyadenylation sites in vertebrate genes
Ju Youn Lee et al.
NUCLEIC ACIDS RESEARCH (2007)
AnimalQTLdb: a livestock QTL database tool set for positional QTL information mining and beyond
Zhi-Liang Hu et al.
NUCLEIC ACIDS RESEARCH (2007)
MEME: discovering and analyzing DNA and protein sequence motifs
Timothy L. Bailey et al.
NUCLEIC ACIDS RESEARCH (2006)
PolyA_DB: a database for mammalian mRNA polyadenylation
HB Zhang et al.
NUCLEIC ACIDS RESEARCH (2005)
A large-scale analysis of mRNA polyadenylation of human and mouse genes
B Tian et al.
NUCLEIC ACIDS RESEARCH (2005)
Patterns of variant polyadenylation signal usage in human genes
E Beaudoing et al.
GENOME RESEARCH (2000)
分享论文
