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Donovan H. Parks et al.
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Benjamin Buchfink et al.
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Qiyun Zhu et al.
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John Larsson et al.
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A Tomitani et al.
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C Pál et al.
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GD Price et al.
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S Yoshihara et al.
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AJ Enright et al.
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D Bhaya et al.
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A Sääf et al.
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