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Waldan K. Kwong et al.
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Rotem Sorek et al.
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Zhilan Sun et al.
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Jae-Hyung Ahn et al.
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Beile Gao et al.
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Nancy A. Moran et al.
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Zakee L. Sabree et al.
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Olaf Schneewind et al.
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Biofilm formation and dispersal in Gram-positive bacteria
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Evolution and classification of the CRISPR-Cas systems
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