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Julia K. Goodrich et al.
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Kirsten Maren Ellegaard et al.
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Alejandro Reyes et al.
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Jeremy J. Barr et al.
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A. Lengeling et al.
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Paul E. Turner et al.
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Scott A. Handley et al.
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Melissa B. Duhaime et al.
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Anton Bankevich et al.
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Valentina Tremaroli et al.
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Alejandro Reyes et al.
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Breck A. Duerkop et al.
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Min-Soo Kim et al.
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The human gut virome: Inter-individual variation and dynamic response to diet
Samuel Minot et al.
GENOME RESEARCH (2011)
Diversity and distribution of single-stranded DNA phages in the North Atlantic Ocean
Kimberly P. Tucker et al.
ISME JOURNAL (2011)
Physical fractionation of aquatic viral assemblages
Jennifer R. Brum et al.
LIMNOLOGY AND OCEANOGRAPHY-METHODS (2011)
DNA Extraction Columns Contaminated with Murine Sequences
Otto Erlwein et al.
PLOS ONE (2011)
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Brian D. Muegge et al.
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Cynthia Andrews-Pfannkoch et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2010)
Recent developments and perspectives in the investigation of probiotic effects
Steffen Wohlgemuth et al.
INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY (2010)
Viruses in the faecal microbiota of monozygotic twins and their mothers
Alejandro Reyes et al.
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Transfer of carbohydrate-active enzymes from marine bacteria to Japanese gut microbiota
Jan-Hendrik Hehemann et al.
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Junjie Qin et al.
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Multiple displacement amplification compromises quantitative analysis of metagenomes
Suzan Yilmaz et al.
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Simon J. Labrie et al.
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BLAST plus : architecture and applications
Christiam Camacho et al.
BMC BIOINFORMATICS (2009)
Laboratory procedures to generate viral metagenomes
Rebecca V. Thurber et al.
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A simple method for directional transcriptome sequencing using Illumina technology
Nicholas J. Croucher et al.
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Amplification of uncultured single-stranded DNA viruses from rice paddy soil
Kyoung-Ho Kim et al.
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5500 Phages examined in the electron microscope
H. -W. Ackermann
ARCHIVES OF VIROLOGY (2007)
Symbiotic bacteria direct expression of an intestinal bactericidal lectin
Heather L. Cash et al.
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Daniela Haible et al.
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Template-independent ligation of single-stranded DNA by T4 DNA ligase
H Kuhn et al.
FEBS JOURNAL (2005)
Host-bacterial mutualism in the human intestine
F Bäckhed et al.
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Osmotic shock and the strength of viral capsids
A Cordova et al.
BIOPHYSICAL JOURNAL (2003)
The future of bacteriophage biology
A Campbell
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Role of mobile DNA in the evolution of vancomycin-resistant Enterococcus faecalis
IT Paulsen et al.
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A genomic view of the human-Bacteroides thetaiotaomicron symbiosis
J Xu et al.
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Cultivation of the ubiquitous SAR11 marine bacterioplankton clade
MS Rappé et al.
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A virus discovery method incorporating DNase treatment and its application to the identification of two bovine parvovirus species
T Allander et al.
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