相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Enterobacteriaceae? Enterobacterales? What Should We Call Enteric Gram-Negative Bacilli? A Micro-Comic Strip
Alexander J. McAdam
JOURNAL OF CLINICAL MICROBIOLOGY (2020)
Information about variations in multiple copies of bacterial 16S rRNA genes may aid in species identification
Jerald Conrad Ibal et al.
PLOS ONE (2019)
A Comparison of Three Different Bioinformatics Analyses of the 16S-23S rRNA Encoding Region for Bacterial Identification
Nilay Peker et al.
FRONTIERS IN MICROBIOLOGY (2019)
An Update on Mycobacterial Taxonomy, 2016-2017
Nicole Parrish
JOURNAL OF CLINICAL MICROBIOLOGY (2019)
Identification and removal of contaminating microbial DNA from PCR reagents: impact on low-biomass microbiome analyses
L. F. Stinson et al.
LETTERS IN APPLIED MICROBIOLOGY (2019)
MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization
Kazutaka Katoh et al.
BRIEFINGS IN BIOINFORMATICS (2019)
The Complexities of Nocardia Taxonomy and Identification
Patricia S. Conville et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2018)
Validation of MALDI-TOF MS Biotyper database optimized for anaerobic bacteria: The ENRIA project
A. C. M. Veloo et al.
ANAEROBE (2018)
Bacteroides fragilis: A whole MALDI-based workflow from identification to confirmation of carbapenemase production for routine laboratories
M. Cordovana et al.
ANAEROBE (2018)
Eggerthella lenta Bloodstream Infections Are Associated With Increased Mortality Following Empiric Piperacillin-Tazobactam (TZP) Monotherapy: A Population-based Cohort Study
Alejandra Ugarte-Torres et al.
CLINICAL INFECTIOUS DISEASES (2018)
Practical issues in implementing whole-genome-sequencing in routine diagnostic microbiology
J. W. A. Rossen et al.
CLINICAL MICROBIOLOGY AND INFECTION (2018)
Identification of Nocardia species from clinical isolates using MALDI-TOF mass spectrometry
M. Marin et al.
CLINICAL MICROBIOLOGY AND INFECTION (2018)
Evolution of virulence in the Mycobacterium tuberculosis complex
Mickael Orgeur et al.
CURRENT OPINION IN MICROBIOLOGY (2018)
First case of a bloodstream infection caused by the genus Brachybacterium
Kiyoko Tamai et al.
JOURNAL OF INFECTION AND CHEMOTHERAPY (2018)
Phylogenetic classification of six novel species belonging to the genus Bifidobacterium comprising Bifidobacterium anseris sp nov., Bifidobacterium criceti sp nov., Bifidobacterium imperatoris sp nov., Bifidobacterium italicum sp nov., Bifidobacterium margollesii sp nov and Bifidobacterium parmae sp nov.
Gabriele Andrea Lugli et al.
SYSTEMATIC AND APPLIED MICROBIOLOGY (2018)
Brevundimonas spp: Emerging global opportunistic pathogens
Michael P. Ryan et al.
VIRULENCE (2018)
Phylogenomics and Comparative Genomic Studies Robustly Support Division of the Genus Mycobacterium into an Emended Genus Mycobacterium and Four Novel Genera
Radhey S. Gupta et al.
FRONTIERS IN MICROBIOLOGY (2018)
Phylogeny Trumps Chemotaxonomy: A Case Study Involving Turicella otitidis
Inwoo Baek et al.
FRONTIERS IN MICROBIOLOGY (2018)
Correcting for 16S rRNA gene copy numbers in microbiome surveys remains an unsolved problem
Stilianos Louca et al.
MICROBIOME (2018)
Phylotype-Level Profiling of Lactobacilli in Highly Complex Environments by Means of an Internal Transcribed Spacer-Based Metagenomic Approach
Christian Milani et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2018)
Current taxonomy of Rhodococcus species and their role in infections
Mohadeseh Majidzadeh et al.
EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES (2018)
Genome-Based Taxonomic Classification of the Phylum Actinobacteria
Imen Nouioui et al.
FRONTIERS IN MICROBIOLOGY (2018)
A New Phylogenetic Framework for the Animal-Adapted Mycobacterium tuberculosis Complex
Daniela Brites et al.
FRONTIERS IN MICROBIOLOGY (2018)
Brucella vertebral osteomyelitis misidentified as an Ochrobactrum anthropi infection
Joao Trepa et al.
IDCASES (2018)
Propionibacterium spp.-source of propionic acid, vitamin B12, and other metabolites important for the industry
Kamil Piwowarek et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2018)
What's in a Name? New Bacterial Species and Changes to Taxonomic Status from 2012 through 2015
Erik Munson et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2017)
Identification of Molds by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry
Maurizio Sanguinetti et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2017)
Performance of the matrix-assisted laser desorption ionization time-of-flight mass spectrometry system for rapid identification of streptococci: a review
W. -T. Fan et al.
EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES (2017)
Microbial genomics and antimicrobial susceptibility testing
W. Michael Dunne et al.
EXPERT REVIEW OF MOLECULAR DIAGNOSTICS (2017)
Gordonia: isolation and identification in clinical samples and role in biotechnology
Fatemeh Andalibi et al.
FOLIA MICROBIOLOGICA (2017)
Global Prevalence of Helicobacter pylori Infection: Systematic Review and Meta-Analysis
James K. Y. Hooi et al.
GASTROENTEROLOGY (2017)
Phylogenomics and comparative genomic studies delineate six main clades within the family Enterobacteriaceae and support the reclassification of several polyphyletic members of the family
Seema Alnajar et al.
INFECTION GENETICS AND EVOLUTION (2017)
Application of next generation sequencing in clinical microbiology and infection prevention
Ruud H. Deurenberg et al.
JOURNAL OF BIOTECHNOLOGY (2017)
Prevalence and Outcomes of Achromobacter Species Infections in Adults with Cystic Fibrosis: a North American Cohort Study
B. D. Edwards et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2017)
Global Mycobacterium chimaera outbreak: challenges for the near future
R. Sommerstein et al.
JOURNAL OF HOSPITAL INFECTION (2017)
Global outbreak of severe Mycobacterium chimaera disease after cardiac surgery: a molecular epidemiological study
Jakko van Ingen et al.
LANCET INFECTIOUS DISEASES (2017)
Ochrobactrum anthropi Fulminant Early-onset Neonatal Sepsis: A Case Report and Review of Literature
Wasim Khasawneh et al.
PEDIATRIC INFECTIOUS DISEASE JOURNAL (2017)
Phascolarctobacterium faecium abundant colonization in human gastrointestinal tract
Feifan Wu et al.
EXPERIMENTAL AND THERAPEUTIC MEDICINE (2017)
Targeted next-generation sequencing of the 16S-23S rRNA region for culture-independent bacterial identification - increased discrimination of closely related species
Artur J. Sabat et al.
SCIENTIFIC REPORTS (2017)
Phylogenetic Network Analysis Revealed the Occurrence of Horizontal Gene Transfer of 16S rRNA in the Genus Enterobacter
Mitsuharu Sato et al.
FRONTIERS IN MICROBIOLOGY (2017)
Insight of Genus Corynebacterium: Ascertaining the Role of Pathogenic and Non-pathogenic Species
Alberto Oliveira et al.
FRONTIERS IN MICROBIOLOGY (2017)
Leptotrichia species in infections II
Emenike R. K. Eribe et al.
JOURNAL OF ORAL MICROBIOLOGY (2017)
Facklamia Species as an Underrecognized Pathogen
Elham Rahmati et al.
OPEN FORUM INFECTIOUS DISEASES (2017)
Exiguobacterium sp A1b/GX59 isolated from a patient with community-acquired pneumonia and bacteremia: genomic characterization and literature review
Xingchun Chen et al.
BMC INFECTIOUS DISEASES (2017)
First case of bacteremia caused by Janibacter hoylei
Yong Kwan Lim et al.
APMIS (2017)
Insights into the Geobacillus stearothermophilus species based on phylogenomic principles
S. A. Burgess et al.
BMC MICROBIOLOGY (2017)
Tracing the Enterococci from Paleozoic Origins to the Hospital
Francois Lebreton et al.
CELL (2017)
Multidrug-resistant Achromobacter animicus causing wound infection in a street child in Mwanza, Tanzania
Nyambura Moremi et al.
DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE (2017)
Draft Genome Sequence of Pannonibacter indicus Strain HT23T (DSM 23407T), a Highly Arsenate-Tolerant Bacterium Isolated from a Hot Spring in India
Saumya Bandyopadhyay et al.
GENOME ANNOUNCEMENTS (2017)
Rapid identification of Robinsoniella peoriensis using specific 16S rRNA gene PCR primers
Terence R. Whitehead et al.
ANAEROBE (2017)
Blautia massiliensis sp nov., isolated from a fresh human fecal sample and emended description of the genus Blautia
Guillaume A. Durand et al.
ANAEROBE (2017)
Draft Genome Sequence of the Plant Growth-Promoting Pseudomonas punonensis Strain D1-6 Isolated from the Desert Plant Erodium hirtum in Jordan
Feras F. Lafi et al.
GENOME ANNOUNCEMENTS (2017)
Phylogenomic analysis of the genus Ralstonia based on 686 single-copy genes
Yucheng Zhang et al.
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY (2016)
Rapid identification of 6328 isolates of pathogenic yeasts using MALDI-ToF MS and a simplified, rapid extraction procedure that is compatible with the Bruker Biotyper platform and database
Mark Fraser et al.
MEDICAL MYCOLOGY (2016)
Reclassification of Clostridium difficile as Clostridioides difficile (Hall and O'Toole 1935) Prevot 1938
Paul A. Lawson et al.
ANAEROBE (2016)
Bioanalyzer chips can be used interchangeably for many analyses of DNA or RNA
Jessica Davies et al.
BIOTECHNIQUES (2016)
First case report of infection due to Cupriavidus gilardii in a patient without immunodeficiency: a case report
Takehito Kobayashi et al.
BMC INFECTIOUS DISEASES (2016)
Development and evaluation of a novel fast broad-range 16S ribosomal DNA PCR and sequencing assay for diagnosis of bacterial infective endocarditis: multi-year experience in a large Canadian healthcare zone and a literature review
Robert J. H. Miller et al.
BMC INFECTIOUS DISEASES (2016)
Actinotignum schaalii (formerly Actinobaculum schaalii): a newly recognized pathogen-review of the literature
R. Lotte et al.
CLINICAL MICROBIOLOGY AND INFECTION (2016)
A Primer on Infectious Disease Bacterial Genomics
Tarah Lynch et al.
CLINICAL MICROBIOLOGY REVIEWS (2016)
Mass spectrometry applications in microbiology beyond microbe identification: progress and potential
Maurizio Sanguinetti et al.
EXPERT REVIEW OF PROTEOMICS (2016)
Emended description of Mycobacterium abscessus, Mycobacterium abscessus subsp abscessus and Mycobacterium abscessus subsp bolletii and designation of Mycobacterium abscessus subsp massiliense comb. nov.
Enrico Tortoli et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2016)
Kocuria arsenatis sp nov., an arsenic-resistant endophytic actinobacterium associated with Prosopis laegivata grown on high-arsenic-polluted mine tailing
Brenda Roman-Ponce et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2016)
Transfer of eleven species of the genus Burkholderia to the genus Paraburkholderia and proposal of Caballeronia gen. nov to accommodate twelve species of the genera Burkholderia and Paraburkholderia
Anatoly P. Dobritsa et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2016)
Genome-based phylogeny and taxonomy of the 'Enterobacteriales': proposal for Enterobacterales ord. nov divided into the families Enterobacteriaceae, Erwiniaceae fam. nov., Pectobacteriaceae fam. nov., Yersiniaceae fam. nov., Hafniaceae fam. nov., Morganellaceae fam. nov., and Budviciaceae fam. nov.
Mobolaji Adeolu et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2016)
The natural history of cutaneous propionibacteria, and reclassification of selected species within the genus Propionibacterium to the proposed novel genera Acidipropionibacterium gen. nov., Cutibacterium gen. nov and Pseudopropionibacterium gen. nov.
Christian F. P. Scholz et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2016)
Benchmarking of methods for identification of antimicrobial resistance genes in bacterial whole genome data
Philip T. L. C. Clausen et al.
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2016)
Complete genome sequence of Pandoraea thiooxydans DSM 25325T, a thiosulfate-oxidizing bacterium
Delicia Yong et al.
JOURNAL OF BIOTECHNOLOGY (2016)
Species-Level Identification of Actinomyces Isolates Causing Invasive Infections: Multiyear Comparison of Vitek MS (Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry) to Partial Sequencing of the 16S rRNA Gene
T. Lynch et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2016)
Assuring the Quality of Next-Generation Sequencing in Clinical Microbiology and Public Health Laboratories
Amy S. Gargis et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2016)
Emerging and Future Applications of Matrix-Assisted Laser Desorption Ionization Time-of-Flight (MALDI-TOF) Mass Spectrometry in the Clinical Microbiology Laboratory A Report of the Association for Molecular Pathology
Christopher D. Doern et al.
JOURNAL OF MOLECULAR DIAGNOSTICS (2016)
Antibiotic resistance mechanisms of Myroides sp.
Shao-hua Hu et al.
JOURNAL OF ZHEJIANG UNIVERSITY-SCIENCE B (2016)
Phylogenetics of family Enterobacteriaceae and proposal to reclassify Escherichia hermannii and Salmonella subterranea as Atlantibacter hermannii and Atlantibacter subterranea gen. nov., comb. nov.
Hiroyuki Hata et al.
MICROBIOLOGY AND IMMUNOLOGY (2016)
Genomic analysis of 38 Legionella species identifies large and diverse effector repertoires
David Burstein et al.
NATURE GENETICS (2016)
Scaling laws predict global microbial diversity
Kenneth J. Locey et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)
Isolation of Staphylococcus microti from milk of dairy cows with mastitis
Jaroslaw Krol et al.
VETERINARY MICROBIOLOGY (2016)
The Underestimation of Global Microbial Diversity
Jay T. Lennon et al.
MBIO (2016)
Using Matrix-Assisted Laser Desorption Ionization-Time of Flight (MALDI-TOF) Complemented with Selected 16S rRNA and gyrB Genes Sequencing to Practically Identify Clinical Important Viridans Group Streptococci (VGS)
Menglan Zhou et al.
FRONTIERS IN MICROBIOLOGY (2016)
A method for high precision sequencing of near full-length 16S rRNA genes on an Illumina MiSeq
Catherine M. Burke et al.
PEERJ (2016)
Whole metagenome profiling reveals skin microbiome-dependent susceptibility to atopic dermatitis flare
Kern Rei Chng et al.
NATURE MICROBIOLOGY (2016)
Pitfalls of DNA Quantification Using DNA-Binding Fluorescent Dyes and Suggested Solutions
Yuki Nakayama et al.
PLOS ONE (2016)
Identification of Veillonella Species in the Tongue Biofilm by Using a Novel One-Step Polymerase Chain Reaction Method
Izumi Mashima et al.
PLOS ONE (2016)
Proteobacteria from the human skin microbiota: Species-level diversity and hypotheses
C. Cosseau et al.
ONE HEALTH (2016)
Significant loss of sensitivity and specificity in the taxonomic classification occurs when short 16S rRNA gene sequences are used
Marcel Martinez-Porchas et al.
HELIYON (2016)
Aerobic Actinomycetes of Clinical Significance
A. Brian Mochon et al.
MICROBIOLOGY SPECTRUM (2016)
Emerging Bacterial Infection: Identification and Clinical Significance of Kocuria Species
Venkataramana Kandi et al.
CUREUS JOURNAL OF MEDICAL SCIENCE (2016)
Proficiency testing for bacterial whole genome sequencing: an end-user survey of current capabilities, requirements and priorities
Jacob Moran-Gilad et al.
BMC INFECTIOUS DISEASES (2015)
Delftia acidovorans: A rare pathogen in immunocompetent and immunocompromised patients
Huseyin Bilgin et al.
CANADIAN JOURNAL OF INFECTIOUS DISEASES & MEDICAL MICROBIOLOGY (2015)
Actinomyces and Related Organisms in Human Infections
Eija Kononen et al.
CLINICAL MICROBIOLOGY REVIEWS (2015)
A systematic review of matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry compared to routine microbiological methods for the time taken to identify microbial organisms from positive blood cultures
P. Dixon et al.
EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES (2015)
Implementation of MALDI-TOF MS technology for the identification of clinical isolates of Mycobacterium spp. in mycobacterial diagnosis
G. Tudo et al.
EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES (2015)
Progress in proteomics for clinical microbiology: MALDI-TOF MS for microbial species identification and more
Alex van Belkum et al.
EXPERT REVIEW OF PROTEOMICS (2015)
Phylogenetic analysis of environmental Legionella pneumophila isolates from an endemic area (Alcoy, Spain)
Leonor Sanchez-Buso et al.
INFECTION GENETICS AND EVOLUTION (2015)
Mycobacterium saopaulense sp nov., a rapidly growing mycobacterium closely related to members of the Mycobacterium chelonae-Mycobacterium abscessus group
Christiane Lourenco Nogueira et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2015)
Proposal for creation of a new genus Neomicrococcus gen. nov to accommodate Zhihengliuella aestuarii Baik et al. 2011 and Micrococcus lactis Chittpurna et al. 2011 as Neomicrococcus aestuarii comb. nov and Neomicrococcus lactis comb. nov.
Om Prakash et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2015)
Lactococcus hircilactis sp nov and Lactococcus laudensis sp nov., isolated from milk
Aurora Meucci et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2015)
Complete genome sequence of oxalate-degrading bacterium Pandoraea vervacti DSM 23571T
Robson Ee et al.
JOURNAL OF BIOTECHNOLOGY (2015)
Cost Savings Realized by Implementation of Routine Microbiological Identification by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry
Anthony Tran et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2015)
First Case Report of Campylobacter volucris Bacteremia in an Immunocompromised Patient
Oh Joo Kweon et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2015)
Catheter-related blood stream infection caused by Dermacoccus barathri, representing the first case of Dermacoccus infection in humans
Nobuhiro Takahashi et al.
JOURNAL OF INFECTION AND CHEMOTHERAPY (2015)
Next-Generation Sequencing for Infectious Disease Diagnosis and Management A Report of the Association for Molecular Pathology
Martina I. Lefterova et al.
JOURNAL OF MOLECULAR DIAGNOSTICS (2015)
New substitution models for rooting phylogenetic trees
Tom A. Williams et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2015)
VibrioBase: A MALDI-TOF MS database for fast identification of Vibrio spp. that are potentially pathogenic in humans
Rene Erler et al.
SYSTEMATIC AND APPLIED MICROBIOLOGY (2015)
Comparison of MALDI-TOF MS, Housekeeping Gene Sequencing, and 16S rRNA Gene Sequencing for Identification of Aeromonas Clinical Isolates
Hee Bong Shin et al.
YONSEI MEDICAL JOURNAL (2015)
Rapid antibiotic-resistance predictions from genome sequence data for Staphylococcus aureus and Mycobacterium tuberculosis
Phelim Bradley et al.
NATURE COMMUNICATIONS (2015)
Use of MALDI-TOF MS for Identification of Nontuberculous Mycobacterium Species Isolated from Clinical Specimens
Maria Concepcion Mediavilla-Gradolph et al.
BIOMED RESEARCH INTERNATIONAL (2015)
Phylogenomics and systematics in Pseudomonas
Margarita Gomila et al.
FRONTIERS IN MICROBIOLOGY (2015)
The genus Weissella: taxonomy, ecology and biotechnological potential
Vincenzina Fusco et al.
FRONTIERS IN MICROBIOLOGY (2015)
The controversial nature of the Weissella genus: technological and functional aspects versus whole genome analysis-based pathogenic potential for their application in food and health
Hikmate Abriouel et al.
FRONTIERS IN MICROBIOLOGY (2015)
Phylogenomic and Molecular Demarcation of the Core Members of the Polyphyletic Pasteurellaceae Genera Actinobacillus, Haemophilus, and Pasteurella
Sohail Naushad et al.
INTERNATIONAL JOURNAL OF GENOMICS (2015)
Antimicrobial Susceptibility among Clinical Nocardia Species Identified by Multilocus Sequence Analysis
Lisa R. McTaggart et al.
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2015)
First report of bacteremia by Janibacter terrae in humans
M. I. Fernandez-Natal et al.
INFECTION (2015)
Acinetobacter variabilis sp nov (formerly DNA group 15 sensu Tjernberg & Ursing), isolated from humans and animals
Lenka Krizova et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2015)
Gordonia Species as Emerging Causes of Continuous-Ambulatory-Peritoneal-Dialysis-Related Peritonitis Identified by 16S rRNA and secA1 Gene Sequencing and Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry (MALDI-TOF MS)
Jimmy Y. W. Lam et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2015)
MinION nanopore sequencing identifies the position and structure of a bacterial antibiotic resistance island
Philip M. Ashton et al.
NATURE BIOTECHNOLOGY (2015)
Type material in the NCBI Taxonomy Database
Scott Federhen
NUCLEIC ACIDS RESEARCH (2015)
Viridans Group Streptococci Clinical Isolates: MALDI-TOF Mass Spectrometry versus Gene Sequence-Based Identification
Silvia Angeletti et al.
PLOS ONE (2015)
Phenotypic and Genotypic Characteristics of Members of the Genus Streptobacillus
Tobias Eisenberg et al.
PLOS ONE (2015)
Enabling comparative modeling of closely related genomes: example genus Brucella
Jose P. Faria et al.
3 BIOTECH (2015)
Pantoea: insights into a highly versatile and diverse genus within the Enterobacteriaceae
Alyssa M. Walterson et al.
FEMS MICROBIOLOGY REVIEWS (2015)
Rapid draft sequencing and real-time nanopore sequencing in a hospital outbreak of Salmonella
Joshua Quick et al.
GENOME BIOLOGY (2015)
Phylogeny and molecular signatures for the phylum Fusobacteria and its distinct subclades
Radhey S. Gupta et al.
ANAEROBE (2014)
Intraspecific 16S rRNA gene diversity among clinical isolates of Neisseria species
Arij Mechergui et al.
APMIS (2014)
Reagent and laboratory contamination can critically impact sequence-based microbiome analyses
Susannah J. Salter et al.
BMC BIOLOGY (2014)
Real-time comparative evaluation of bioMerieux VITEK MS versus Bruker Microflex MS, two matrix-assisted laser desorption-ionization time-of-flight mass spectrometry systems, for identification of clinically significant bacteria
Wafaa Jamal et al.
BMC MICROBIOLOGY (2014)
Bloodstream infections due to Peptoniphilus spp.: report of 15 cases
K. Brown et al.
CLINICAL MICROBIOLOGY AND INFECTION (2014)
Neisseria meningitidis; clones, carriage, and disease
R. C. Read
CLINICAL MICROBIOLOGY AND INFECTION (2014)
Classification, Identification, and Clinical Significance of Haemophilus and Aggregatibacter Species with Host Specificity for Humans
Niels Norskov-Lauritsen
CLINICAL MICROBIOLOGY REVIEWS (2014)
Emerging Technologies for the Clinical Microbiology Laboratory
Blake W. Buchan et al.
CLINICAL MICROBIOLOGY REVIEWS (2014)
The Genomic Diversification of the Whole Acinetobacter Genus: Origins, Mechanisms, and Consequences
Marie Touchon et al.
GENOME BIOLOGY AND EVOLUTION (2014)
A cloud-compatible bioinformatics pipeline for ultrarapid pathogen identification from next-generation sequencing of clinical samples
Samia N. Naccache et al.
GENOME RESEARCH (2014)
Turicella otitidis and Corynebacterium auris: 20 years on
A. von Graevenitz et al.
INFECTION (2014)
Comparative evaluation of two matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) systems for the identification of clinically significant yeasts
W. Y. Jamal et al.
INTERNATIONAL JOURNAL OF INFECTIOUS DISEASES (2014)
Vagococcus entomophilus sp nov., from the digestive tract of a wasp (Vespula vulgaris)
J. Killer et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2014)
Lactococcus formosensis sp nov., a lactic acid bacterium isolated from yan-tsai-shin (fermented broccoli stems)
Yi-sheng Chen et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2014)
Paenalcaligenes suwonensis sp nov., isolated from spent mushroom compost
Ji-Young Moon et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2014)
Pseudomonas chengduensis sp nov., isolated from landfill leachate
Yong Tao et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2014)
Streptococcus loxodontisalivarius sp nov and Streptococcus saliviloxodontae sp nov., isolated from oral cavities of elephants
Masanori Saito et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2014)
Luteimicrobium xylanilyticum sp nov., isolated from the gut of a long-horned beetle, Massicus raddei
Hyangmi Kim et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2014)
Oribacterium parvum sp nov and Oribacterium asaccharolyticum sp nov., obligately anaerobic bacteria from the human oral cavity, and emended description of the genus Oribacterium
Maria V. Sizova et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2014)
Raoultella electrica sp nov., isolated from anodic biofilms of a glucose-fed microbial fuel cell
Zen-ichiro Kimura et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2014)
Polyphasic taxonomic revision of the Ralstonia solanacearum species complex: proposal to emend the descriptions of Ralstonia solanacearum and Ralstonia syzygii and reclassify current R. syzygii strains as Ralstonia syzygii subsp syzygii subsp nov., R. solanacearum phylotype IV strains as Ralstonia syzygii subsp indonesiensis subsp nov., banana blood disease bacterium strains as Ralstonia syzygii subsp celebesensis subsp nov and R. solanacearum phylotype I and III strains as Ralstonia pseudosolanacearum sp nov.
Irda Safni et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2014)
Rapid single-colony whole-genome sequencing of bacterial pathogens
Claudio U. Koeser et al.
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2014)
Rapid nucleic acid diagnostics for the detection of antimicrobial resistance in Gram-negative bacteria: is it time for a paradigm shift?
Nina Tuite et al.
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2014)
Sepsis with an Atopobium-Like Species in a Patient with Fournier's Gangrene
Matthijs Oyaert et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2014)
Bacteremia Caused by Comamonas kerstersii in a Patient with Diverticulosis
Onya Opota et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2014)
Rothia Bacteremia: a 10-Year Experience at Mayo Clinic, Rochester, Minnesota
Poornima Ramanan et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2014)
First Report of Endocarditis Caused by a Pseudoclavibacter Species
Helene Pailhories et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2014)
Acidovorax oryzae Catheter-Associated Bloodstream Infection
Christopher Orsborne et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2014)
Comparing Whole-Genome Sequencing with Sanger Sequencing for spa Typing of Methicillin-Resistant Staphylococcus aureus
Mette Damkjaer Bartels et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2014)
Improved Detection of Bacterial Central Nervous System Infections by Use of a Broad-Range PCR Assay
T. Meyer et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2014)
Phylogenetic analysis of the Listeria monocytogenes based on sequencing of 16S rRNA and hlyA genes
Dharmendra Kumar Soni et al.
MOLECULAR BIOLOGY REPORTS (2014)
MALDI-TOF Mass Spectrometry: Any Use for Aspergilli?
Maurizio Sanguinetti et al.
MYCOPATHOLOGIA (2014)
Bacterial genome sequencing in the clinic: bioinformatic challenges and solutions
W. Florian Fricke et al.
NATURE REVIEWS GENETICS (2014)
Citrobacter rodentium: infection, inflammation and the microbiota
James W. Collins et al.
NATURE REVIEWS MICROBIOLOGY (2014)
Parallel independent evolution of pathogenicity within the genus Yersinia
Sandra Reuter et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Phylogeny of the Rhizobium-Allorhizobium-Agrobacterium clade supports the delineation of Neorhizobium gen. nov.
Seyed Abdollah Mousavi et al.
SYSTEMATIC AND APPLIED MICROBIOLOGY (2014)
The Characteristics of Ubiquitous and Unique Leptospira Strains from the Collection of Russian Centre for Leptospirosis
Olga L. Voronina et al.
BIOMED RESEARCH INTERNATIONAL (2014)
Molecular signatures and phylogenomic analysis of the genus Burkholderia: proposal for division of this genus into the emended genus Burkholderia containing pathogenic organisms and a new genus Paraburkholderia gen. nov harboring environmental species
Amandeep Sawana et al.
FRONTIERS IN GENETICS (2014)
Infections caused by Stenotrophomonas maltophilia in recipients of hematopoietic stem cell transplantation
Khalid Ahmed Al-Anazi et al.
FRONTIERS IN ONCOLOGY (2014)
Draft Genome Sequence of Actinomadura madurae LIID-AJ290, Isolated from a Human Mycetoma Case
Lucio Vera-Cabrera et al.
GENOME ANNOUNCEMENTS (2014)
The Comprehensive Antibiotic Resistance Database
Andrew G. McArthur et al.
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2013)
Comparative Genomic and Functional Analysis of Lactobacillus casei and Lactobacillus rhamnosus Strains Marketed as Probiotics
Francois P. Douillard et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)
Intragenomic Heterogeneity of 16S rRNA Genes Causes Overestimation of Prokaryotic Diversity
Dong-Lei Sun et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)
Comparative genome characterization of Achromobacter members reveals potential genetic determinants facilitating the adaptation to a pathogenic lifestyle
Xiangyang Li et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2013)
Streptococcus danieliae sp nov., a novel bacterium isolated from the caecum of a mouse
Thomas Clavel et al.
ARCHIVES OF MICROBIOLOGY (2013)
Rapid bacterial genome sequencing: methods and applications in clinical microbiology
C. Bertelli et al.
CLINICAL MICROBIOLOGY AND INFECTION (2013)
Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry: a Fundamental Shift in the Routine Practice of Clinical Microbiology
Andrew E. Clark et al.
CLINICAL MICROBIOLOGY REVIEWS (2013)
Entering the era of bacterial epigenomics with single molecule real time DNA sequencing
Brigid M. Davis et al.
CURRENT OPINION IN MICROBIOLOGY (2013)
A genomic update on clostridial phylogeny: Gram-negative spore formers and other misplaced clostridia
Natalya Yutin et al.
ENVIRONMENTAL MICROBIOLOGY (2013)
16S rRNA partial gene sequencing for the differentiation and molecular subtyping of Listeria species
Rosalee S. Hellberg et al.
FOOD MICROBIOLOGY (2013)
Classification of Leptospira genomospecies 1, 3, 4 and 5 as Leptospira alstonii sp nov., Leptospira vanthielii sp nov., Leptospira terpstrae sp nov and Leptospira yanagawae sp nov., respectively
L. Smythe et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2013)
Lysinimonas soli gen. nov., sp nov., isolated from soil, and reclassification of Leifsonia kribbensis Dastager et al. 2009 as Lysinimonas kribbensis sp nov., comb. nov.
Yun-Hee Jang et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2013)
Characterization of strains of Weissella fabalis sp nov and Fructobacillus tropaeoli from spontaneous cocoa bean fermentations
Isabel Snauwaert et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2013)
Lactococcus taiwanensis sp nov., a lactic acid bacterium isolated from fresh cummingcordia
Yi-sheng Chen et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2013)
Blautia faecis sp nov., isolated from human faeces
Seong-Kyu Park et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2013)
Weissella diestrammenae sp nov., isolated from the gut of a camel cricket (Diestrammena coreana)
Sei Joon Oh et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2013)
Paraoerskovia sediminicola sp nov., an actinobacterium isolated from sea sediment, and emended description of the genus Paraoerskovia
Moriyuki Hamada et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2013)
Paenalcaligenes hermetiae sp nov., isolated from the larval gut of Hermetia illucens (Diptera: Stratiomyidae), and emended description of the genus Paenalcaligenes
Youn Yeop Lee et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2013)
Janibacter cremeus sp nov., an actinobacterium isolated from sea sediment
Moriyuki Hamada et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2013)
Rothia endophytica sp nov., an actinobacterium isolated from Dysophylla stellata (Lour.) Benth
Zi-Jun Xiong et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2013)
Novel Approach for Differentiating Shigella Species and Escherichia coli by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry
Prasanna D. Khot et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2013)
Septicemia Caused by Leifsonia aquatica in a Healthy Patient after Retinal Reattachment Surgery
Lei Han et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2013)
First Case of Pseudoclavibacter bifida Bacteremia in an Immunocompromised Host with Chronic Obstructive Pulmonary Disease (COPD)
Matthijs Oyaert et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2013)
Providencia thailandensis sp nov., isolated from seafood processing wastewater
Suwannee Khunthongpan et al.
JOURNAL OF GENERAL AND APPLIED MICROBIOLOGY (2013)
Comparison of two matrix-assisted laser desorption/ionization-time of flight (MALDI-TOF) mass spectrometry methods and API 20AN for identification of clinically relevant anaerobic bacteria
Wafaa Y. Jamal et al.
JOURNAL OF MEDICAL MICROBIOLOGY (2013)
Whole-genome sequencing for analysis of an outbreak of meticillin-resistant Staphylococcus aureus: a descriptive study
Simon R. Harris et al.
LANCET INFECTIOUS DISEASES (2013)
Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies
Anna Klindworth et al.
NUCLEIC ACIDS RESEARCH (2013)
The Variability of the 16S rRNA Gene in Bacterial Genomes and Its Consequences for Bacterial Community Analyses
Tomas Vetrovsky et al.
PLOS ONE (2013)
HACEK Infective Endocarditis: Characteristics and Outcomes from a Large, Multi-National Cohort
Stephen T. Chambers et al.
PLOS ONE (2013)
Comparison of DNA Extraction Methods in Analysis of Salivary Bacterial Communities
Vladimir Lazarevic et al.
PLOS ONE (2013)
More Than Meets the Eye: Associations of Vaginal Bacteria with Gram Stain Morphotypes Using Molecular Phylogenetic Analysis
Sujatha Srinivasan et al.
PLOS ONE (2013)
Comparative Genome Analysis of Megasphaera sp Reveals Niche Specialization and Its Potential Role in the Human Gut
Sudarshan Anand Shetty et al.
PLOS ONE (2013)
Species distribution and resistance profiles of coagulase-negative staphylococci isolated from bovine mastitis in Switzerland
A. Moser et al.
SCHWEIZER ARCHIV FUR TIERHEILKUNDE (2013)
Burkholderia pseudomultivorans sp. nov., a novel Burkholderia cepacia complex species from human respiratory samples and the rhizosphere
Charlotte Peeters et al.
SYSTEMATIC AND APPLIED MICROBIOLOGY (2013)
Non-contiguous finished genome sequence and description of Alistipes timonensis sp. nov.
Jean-Christophe Lagier et al.
Standards in Genomic Sciences (2013)
Veillonella, Firmicutes: Microbes disguised as Gram negatives
Tammi Vesth et al.
STANDARDS IN GENOMIC SCIENCES (2013)
Comamonas testosteroni: An Unusual Bacteria Associated with Acute Appendicitis
Gulsum Iclal Bayhan et al.
BALKAN MEDICAL JOURNAL (2013)
Pseudomonas aeruginosa: new insights into pathogenesis and host defenses
Shaan L. Gellatly et al.
PATHOGENS AND DISEASE (2013)
Microbial phylogenetic profiling with the Pacific Biosciences sequencing platform
Erin B. Fichot et al.
MICROBIOME (2013)
Gram-positive anaerobic cocci - commensals and opportunistic pathogens
Elizabeth Carmel Murphy et al.
FEMS MICROBIOLOGY REVIEWS (2013)
The newly-recognized species Staphylococcus massiliensis is likely to be part of the human skin microflora
Zhiyong Zong
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY (2012)
Janibacter alkaliphilus sp. nov., isolated from coral Anthogorgia sp
Jie Li et al.
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY (2012)
MALDIquant: a versatile R package for the analysis of mass spectrometry data
Sebastian Gibb et al.
BIOINFORMATICS (2012)
Comparative genomics of bacteria in the genus Providencia isolated from wild Drosophila melanogaster
Madeline R. Galac et al.
BMC GENOMICS (2012)
Genome characterisation of the genus Francisella reveals insight into similar evolutionary paths in pathogens of mammals and fish
Andreas Sjodin et al.
BMC GENOMICS (2012)
A tale of three next generation sequencing platforms: comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers
Michael A. Quail et al.
BMC GENOMICS (2012)
Species identification of Aspergillus, Fusarium and Mucorales with direct surface analysis by matrix-assisted laser desorption ionization time-of-flight mass spectrometry
E. De Carolis et al.
CLINICAL MICROBIOLOGY AND INFECTION (2012)
SpectraBank: An open access tool for rapid microbial identification by MALDI-TOF MS fingerprinting
Karola Boehme et al.
ELECTROPHORESIS (2012)
Phylogenetic study of Lactobacillus acidophilus group, L. casei group and L. plantarum group based on partial hsp60, pheS and tuf gene sequences
Jie Yu et al.
EUROPEAN FOOD RESEARCH AND TECHNOLOGY (2012)
Identification of clinical isolates of anaerobic bacteria using matrix-assisted laser desorption ionization-time of flight mass spectrometry
D. P. Fedorko et al.
EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES (2012)
Next-generation and whole-genome sequencing in the diagnostic clinical microbiology laboratory
W. M. Dunne et al.
EUROPEAN JOURNAL OF CLINICAL MICROBIOLOGY & INFECTIOUS DISEASES (2012)
Analysis of 16S rRNA and mxaF genes revealing insights into Methylobacterium niche-specific plant association
Manuella Nobrega Dourado et al.
GENETICS AND MOLECULAR BIOLOGY (2012)
First report of chronic implant-related septic arthritis and osteomyelitis due to Kytococcus schroeteri and a review of human K-schroeteri infections
J. F. W. Chan et al.
INFECTION (2012)
Molecular methods for pathogen and microbial community detection and characterization: Current and potential application in diagnostic microbiology
Christopher D. Sibley et al.
INFECTION GENETICS AND EVOLUTION (2012)
Peptoniphilus duerdenii sp nov and Peptoniphilus koenoeneniae sp nov., isolated from human clinical specimens
Nurver Ulger-Toprak et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2012)
Knoellia flava sp nov., isolated from pig manure
Xiang Yu et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2012)
Leuconostoc miyukkimchii sp nov., isolated from brown algae (Undaria pinnatifida) kimchi
Seung Hyeon Lee et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2012)
Exiguobacterium aquaticum sp nov., a member of the genus Exiguobacterium
Revti Raichand et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2012)
Corynebacterium deserti sp nov., isolated from desert sand
Zhengfu Zhou et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2012)
Sphingobacterium lactis sp nov and Sphingobacterium alimentarium sp nov., isolated from raw milk and a dairy environment
Verena S. J. Schmidt et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2012)
Kerstersia similis sp nov., isolated from human clinical samples
Peter Vandamme et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2012)
Pseudoclavibacter caeni sp nov., isolated from sludge of a sewage disposal plant
Sathiyaraj Srinivasan et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2012)
Cronobacter condimenti sp nov., isolated from spiced meat, and Cronobacter universalis sp nov., a species designation for Cronobacter sp genomospecies 1, recovered from a leg infection, water and food ingredients
Susan Joseph et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2012)
Advenella faeciporci sp nov., a nitrite-denitrifying bacterium isolated from nitrifying-denitrifying activated sludge collected from a laboratory-scale bioreactor treating piggery wastewater
Masaki Matsuoka et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2012)
Comparison of Next-Generation Sequencing Systems
Lin Liu et al.
JOURNAL OF BIOMEDICINE AND BIOTECHNOLOGY (2012)
Clinical and Microbiological Characteristics of Bacteremia Caused by Eggerthella, Paraeggerthella, and Eubacterium Species at a University Hospital in Taiwan from 2001 to 2010
Meng-Rui Lee et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2012)
Prosthetic Joint Infection Diagnosis Using Broad-Range PCR of Biofilms Dislodged from Knee and Hip Arthroplasty Surfaces Using Sonication
Eric Gomez et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2012)
Dual Priming Oligonucleotides for Broad-Range Amplification of the Bacterial 16S rRNA Gene Directly from Human Clinical Specimens
Oyvind Kommedal et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2012)
The Genus Corynebacterium and Other Medically Relevant Coryneform-Like Bacteria
Kathryn Bernard
JOURNAL OF CLINICAL MICROBIOLOGY (2012)
Extraction of viral nucleic acids: Comparison of five automated nucleic acid extraction platforms
Jens Verheyen et al.
JOURNAL OF CLINICAL VIROLOGY (2012)
Kytococcus schroeteri endocarditis successfully managed with daptomycin: a case report and review of the literature
J. C. Liu et al.
JOURNAL OF MEDICAL MICROBIOLOGY (2012)
Granulicatella infection: diagnosis and management
James S. Cargill et al.
JOURNAL OF MEDICAL MICROBIOLOGY (2012)
Catheter-associated bloodstream infection caused by Leifsonia aquatica in a haemodialysis patient: a case report
Lorena Porte et al.
JOURNAL OF MEDICAL MICROBIOLOGY (2012)
The value of MALDI-TOF MS for the identification of clinically relevant anaerobic bacteria in routine laboratories
Elisabeth Nagy et al.
JOURNAL OF MEDICAL MICROBIOLOGY (2012)
Development of a custom 16S rRNA gene library for the identification and molecular subtyping of Salmonella enterica
Rosalee S. Hellberg et al.
JOURNAL OF MICROBIOLOGICAL METHODS (2012)
Evaluation of Nucleic Acid Sequencing of the D1/D2 Region of the Large Subunit of the 28S rDNA and the Internal Transcribed Spacer Region Using SmartGene IDN Software for Identification of Filamentous Fungi in a Clinical Laboratory
Nicole P. Kwiatkowski et al.
JOURNAL OF MOLECULAR DIAGNOSTICS (2012)
Performance comparison of benchtop high-throughput sequencing platforms
Nicholas J. Loman et al.
NATURE BIOTECHNOLOGY (2012)
Genome sequencing in clinical microbiology
Jacqueline Z-M Chan et al.
NATURE BIOTECHNOLOGY (2012)
Transforming clinical microbiology with bacterial genome sequencing
Xavier Didelot et al.
NATURE REVIEWS GENETICS (2012)
High-throughput bacterial genome sequencing: an embarrassment of choice, a world of opportunity
Nicholas J. Loman et al.
NATURE REVIEWS MICROBIOLOGY (2012)
Internal transcribed spacer region sequence analysis using SmartGene IDNS software for the identification of unusual clinical yeast isolates
E. Susan Slechta et al.
MEDICAL MYCOLOGY (2012)
Mutational robustness of 16S ribosomal RNA, shown by experimental horizontal gene transfer in Escherichia coli
Kei Kitahara et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Genome sequence and description of Alistipes senegalensis sp nov.
Ajay Kumar Mishra et al.
STANDARDS IN GENOMIC SCIENCES (2012)
Insights into the emergent bacterial pathogen Cronobacter spp., generated by multilocus sequence typing and analysis
Susan Joseph et al.
FRONTIERS IN MICROBIOLOGY (2012)
Burden of emerging anaerobes in the MALDI-TOF and 16S.rRNA gene sequencing era
Bernard La Scola et al.
ANAEROBE (2011)
Antimicrobial Susceptibility of Clinically Relevant Gram-Positive Anaerobic Cocci Collected over a Three-Year Period in the Netherlands
A. C. M. Veloo et al.
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2011)
Broad-Range 16S rRNA Gene Polymerase Chain Reaction for Diagnosis of Culture-Negative Bacterial Infections
Silvana K. Rampini et al.
CLINICAL INFECTIOUS DISEASES (2011)
Laboratory-based diagnosis of pneumococcal pneumonia: state of the art and unmet needs
G. Vernet et al.
CLINICAL MICROBIOLOGY AND INFECTION (2011)
Evaluation of eight cases of confirmed Bordetella bronchiseptica infection and colonization over a 15-year period
D. Wernli et al.
CLINICAL MICROBIOLOGY AND INFECTION (2011)
Evaluation of matrix-assisted laser desorption ionization-time-of-flight mass spectrometry in comparison to rpoB gene sequencing for species identification of bloodstream infection staphylococcal isolates
T. Spanu et al.
CLINICAL MICROBIOLOGY AND INFECTION (2011)
Taxonomy, Epidemiology, and Clinical Relevance of the Genus Arcobacter
Luis Collado et al.
CLINICAL MICROBIOLOGY REVIEWS (2011)
Septic shock, pneumonia, and soft tissue infection due to Myroides odoratimimus: report of a case and review of Myroides infections
P. Benedetti et al.
INFECTION (2011)
Auritidibacter ignavus gen. nov., sp. nov., of the family Micrococcaceae isolated from an ear swab of a man with otitis externa, transfer of the members of the family Yaniellaceae Li et al. 2008 to the family Micrococcaceae and emended description of the suborder Micrococcineae
A. F. Yassin et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2011)
Streptococcus porcorum sp nov., isolated from domestic and wild pigs
A. I. Vela et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2011)
Inquilinus ginsengisoli sp. nov., isolated from soil of a ginseng field
Hae-Min Jung et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2011)
Lactococcus fujiensis sp nov., a lactic acid bacterium isolated from vegetable matter
Yimin Cai et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2011)
Leifsonia psychrotolerans sp nov., a psychrotolerant species of the family Microbacteriaceae from Livingston Island, Antarctica
Lars Ganzert et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2011)
Vagococcus acidifermentans sp nov., isolated from an acidogenic fermentation bioreactor
Liang Wang et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2011)
Parasutterella secunda sp. nov., isolated from human faeces and proposal of Sutterellaceae fam. nov. in the order Burkholderiales
Masami Morotomi et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2011)
Neisseria wadsworthii sp. nov. and Neisseria shayeganii sp. nov., isolated from clinical specimens
William J. Wolfgang et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2011)
Corynebacterium nuruki sp nov., isolated from an alcohol fermentation starter
Na-Ri Shin et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2011)
Calidifontibacter indicus gen. nov., sp nov., a member of the family Dermacoccaceae isolated from a hot spring, and emended description of the family Dermacoccaceae
Arunachalam Ruckmani et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2011)
Phylogenetic analysis of the genera Proteus, Morganella and Providencia by comparison of rpoB gene sequences of type and clinical strains suggests the reclassification of Proteus myxofaciens in a new genus, Cosenzaea gen. nov., as Cosenzaea myxofaciens comb. nov.
Giovanni M. Giammanco et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2011)
Yersinia pekkanenii sp nov.
Anna Murros-Kontiainen et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2011)
Brachybacterium squillarum sp nov., isolated from salt-fermented seafood
Seong-Kyu Park et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2011)
Kocuria salsicia sp. nov., isolated from salt-fermented seafood
Ji-Hyun Yun et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2011)
Yersinia entomophaga sp. nov., isolated from the New Zealand grass grub Costelytra zealandica
Mark R. H. Hurst et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2011)
Streptococcus lactarius sp nov., isolated from breast milk of healthy women
Virginia Martin et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2011)
Pandoraea oxalativorans sp nov., Pandoraea faecigallinarum sp nov and Pandoraea vervacti sp nov., isolated from oxalate-enriched culture
Nurettin Sahin et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2011)
Comparative chemotaxonomic and phylogenetic studies on the genus Arcanobacterium Collins et al. 1982 emend. Lehnen et al. 2006: proposal for Trueperella gen. nov and emended description of the genus Arcanobacterium
A. F. Yassin et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2011)
Micrococcus lactis sp nov., isolated from dairy industry waste
Chittpurna et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2011)
Weissella ceti sp nov., isolated from beaked whales (Mesoplodon bidens)
A. I. Vela et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2011)
Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry as an Alternative to 16S rRNA Gene Sequencing for Identification of Difficult-To-Identify Bacterial Strains
A. Bizzini et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2011)
tuf Gene Sequence Analysis Has Greater Discriminatory Power than 16S rRNA Sequence Analysis in Identification of Clinical Isolates of Coagulase-Negative Staphylococci
Sang Mee Hwang et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2011)
Identification by 16S rRNA Gene Sequencing of Negativicoccus succinicivorans Recovered from the Blood of a Patient with Hemochromatosis and Pancreatitis
D. L. Church et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2011)
Actinomadura pelletieri mycetoma - an atypical case with spine and abdominal wall involvement
Antonio Cascio et al.
JOURNAL OF MEDICAL MICROBIOLOGY (2011)
Characterization of polybacterial clinical samples using a set of group-specific broad-range primers targeting the 16S rRNA gene followed by DNA sequencing and RipSeq analysis
Oyvind Kommedal et al.
JOURNAL OF MEDICAL MICROBIOLOGY (2011)
In silico analysis of 16S rRNA gene sequencing based methods for identification of medically important aerobic Gram-negative bacteria
Jade L. L. Teng et al.
JOURNAL OF MEDICAL MICROBIOLOGY (2011)
A Closer Look at Bacteroides: Phylogenetic Relationship and Genomic Implications of a Life in the Human Gut
Fredrik H. Karlsson et al.
MICROBIAL ECOLOGY (2011)
An Efficient Strategy for Broad-Range Detection of Low Abundance Bacteria without DNA Decontamination of PCR Reagents
Shy-Shin Chang et al.
PLOS ONE (2011)
Defining Reference Sequences for Nocardia Species by Similarity and Clustering Analyses of 16S rRNA Gene Sequence Data
Manal Helal et al.
PLOS ONE (2011)
Prospective Genomic Characterization of the German Enterohemorrhagic Escherichia coli O104:H4 Outbreak by Rapid Next Generation Sequencing Technology
Alexander Mellmann et al.
PLOS ONE (2011)
IDENTIFICATION OF COAGULASE-NEGATIVE STAPHYLOCOCCI ISOLATED FROM CONTINUOUS AMBULATORY PERITONEAL DIALYSIS FLUID USING 16S RIBOSOMAL RNA, tuf, AND SodA GENE SEQUENCING
Jeong Hwan Shin et al.
PERITONEAL DIALYSIS INTERNATIONAL (2011)
Complete genome sequence of Paludibacter propionicigenes type strain (WB4(T))
Sabine Gronow et al.
STANDARDS IN GENOMIC SCIENCES (2011)
pkDACLASS: Open source software for analyzing MALDI-TOF data
Juliet Ndukum et al.
BIOINFORMATION (2011)
A review of Brucella infection in marine mammals, with special emphasis on Brucella pinnipedialis in the hooded seal (Cystophora cristata)
Ingebjorg H. Nymo et al.
VETERINARY RESEARCH (2011)
A review of three cases of Clostridium aldenense bacteremia
O. Martin Williams et al.
ANAEROBE (2010)
Dysgonomonas hofstadii sp nov., isolated from a human clinical source
Paul A. Lawson et al.
ANAEROBE (2010)
Yaniella soli sp nov., a new actinobacterium isolated from non-saline forest soil in China
Yi-Guang Chen et al.
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY (2010)
High-throughput genome sequencing of two Listeria monocytogenes clinical isolates during a large foodborne outbreak
Matthew W. Gilmour et al.
BMC GENOMICS (2010)
Activity and DNA contamination of commercial polymerase chain reaction reagents for the universal 16S rDNA real-time polymerase chain reaction detection of bacterial pathogens in blood
Helge Muehl et al.
DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE (2010)
MALDI-TOF-mass spectrometry applications in clinical microbiology
Piseth Seng et al.
FUTURE MICROBIOLOGY (2010)
Luteipulveratus mongoliensis gen. nov., sp nov., an actinobacterial taxon in the family Dermacoccaceae
Ismet Ara et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2010)
Weissella beninensis sp. nov., a motile lactic acid bacterium from submerged cassava fermentations, and emended description of the genus Weissella
Segla Wilfrid Padonou et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2010)
Brevundimonas vancanneytii sp. nov., isolated from blood of a patient with endocarditis
Andreia B. Estrela et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2010)
Staphylococcus rostri sp. nov., a haemolytic bacterium isolated from the noses of healthy pigs
Andrea Riesen et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2010)
Vagococcus penaei sp. nov., isolated from spoilage microbiota of cooked shrimp (Penaeus vannamei)
Emmanuel Jaffres et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2010)
Paenalcaligenes hominis gen. nov., sp nov., a new member of the family Alcaligenaceae
P. Kaempfer et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2010)
Serratia glossinae sp nov., isolated from the midgut of the tsetse fly Glossina palpalis gambiensis
A. Geiger et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2010)
Brucella inopinata sp nov., isolated from a breast implant infection
Holger C. Scholz et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2010)
Hafnia paralvei sp nov., formerly known as Hafnia alvei hybridization group 2
Geert Huys et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2010)
Staphylococcus massiliensis sp nov., isolated from a human brain abscess
Mouhamad Al Masalma et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2010)
Kocuria atrinae sp nov., isolated from traditional Korean fermented seafood
Eun-Jin Park et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2010)
Pseudoclavibacter chungangensis sp nov., isolated from activated sludge
Sung-Lim Cho et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2010)
Kocuria koreensis sp nov., isolated from fermented seafood
Eun-Jin Park et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2010)
Partial recN gene sequencing: a new tool for identification and phylogeny within the genus Streptococcus
Olga O. Glazunova et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2010)
Characterization of Slackia exigua Isolated from Human Wound Infections, Including Abscesses of Intestinal Origin
Keun-Sung Kim et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2010)
Phenotypic and Molecular Characterization of Solobacterium moorei Isolates from Patients with Wound Infection
Guili Zheng et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2010)
Phylogeny and Identification of Nocardia Species on the Basis of Multilocus Sequence Analysis
L. R. McTaggart et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2010)
Evaluation of the Integrated Database Network System (IDNS) SmartGene Software for Analysis of 16S rRNA Gene Sequences for Identification of Nocardia Species
Patricia S. Conville et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2010)
Performance of Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Identification of Bacterial Strains Routinely Isolated in a Clinical Microbiology Laboratory
A. Bizzini et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2010)
Asaia astilbes sp nov., Asaia platycodi sp nov., and Asaia prunellae sp nov., novel acetic acid bacteria isolated from flowers in Japan
Rei Suzuki et al.
JOURNAL OF GENERAL AND APPLIED MICROBIOLOGY (2010)
The New Species Brucella microti Replicates in Macrophages and Causes Death in Murine Models of Infection
Maria P. Jimenez de Baguees et al.
JOURNAL OF INFECTIOUS DISEASES (2010)
Nosocomial infection with Asaia lannensis in two paediatric patients with idiopathic dilated cardiomyopathy
Stefan Juretschko et al.
JOURNAL OF MEDICAL MICROBIOLOGY (2010)
Aerococcus urinae and Aerococcus sanguinicola, two frequently misidentified uropathogens
Vincent Cattoir et al.
SCANDINAVIAN JOURNAL OF INFECTIOUS DISEASES (2010)
Staphylococcus stepanovicii sp nov., a novel novobiocin-resistant oxidase-positive staphylococcal species isolated from wild small mammals
Tomasz Hauschild et al.
SYSTEMATIC AND APPLIED MICROBIOLOGY (2010)
NanoDrop Microvolume Quantitation of Nucleic Acids
Philippe Desjardins et al.
Jove-Journal of Visualized Experiments (2010)
Arthrobacter halodurans sp nov., a new halotolerant bacterium isolated from sea water
Yi-Guang Chen et al.
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY (2009)
The Complete Genome of Comamonas testosteroni Reveals Its Genetic Adaptations to Changing Environments
Ying-Fei Ma et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Moraxella catarrhalis, a Human Respiratory Tract Pathogen
Timothy F. Murphy et al.
CLINICAL INFECTIOUS DISEASES (2009)
Preanalytic removal of human DNA eliminates false signals in general 16S rDNA PCR monitoring of bacterial pathogens in blood
Michael Handschur et al.
COMPARATIVE IMMUNOLOGY MICROBIOLOGY AND INFECTIOUS DISEASES (2009)
The NIH Human Microbiome Project
Jane Peterson et al.
GENOME RESEARCH (2009)
Leuconostoc palmae sp nov., a novel lactic acid bacterium isolated from palm wine
Matthias A. Ehrmann et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)
Description of Leifsonia kafniensis sp nov and Leifsonia antarctica sp nov.
Pavan Kumar Pindi et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)
Alkalibacterium thalassium sp nov., Alkalibacterium pelagium sp nov., Alkalibacterium putridalgicola sp nov and Alkalibacterium kapii sp nov., slightly halophilic and alkaliphilic marine lactic acid bacteria isolated from marine organisms and salted foods collected in Japan and Thailand
Morio Ishikawa et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)
Streptococcus merionis sp nov., isolated from Mongolian jirds (Meriones unguiculatus)
Dennis Tape et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)
Butyricimonas synergistica gen. nov., sp nov and Butyricimonas virosa sp nov., butyric acid-producing bacteria in the family 'Porphyromonadaceae' isolated from rat faeces
Mitsuo Sakamoto et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)
Robinsoniella peoriensis gen. nov., sp nov., isolated from a swine-manure storage pit and a human clinical source
Michael A. Cotta et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)
Paraoerskovia marina gen. nov., sp nov., an actinobacterium isolated from marine sediment
Shams Tabrez Khan et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)
Campylobacter avium sp nov., a hippurate-positive species isolated from poultry
Mirko Rossi et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)
Brevibacterium massiliense sp nov., isolated from a human ankle discharge
Veronique Roux et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)
Pseudoclavibacter soli sp nov., a β-glucosidase-producing bacterium
Myung Kyum Kim et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)
Helcobacillus massiliensis gen. nov., sp nov., a novel representative of the family Dermabacteraceae isolated from a patient with a cutaneous discharge
Aurelie Renvoise et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)
Kocuria gwangalliensis sp nov., an actinobacterium isolated from seawater
Yong Bae Seo et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)
Kocuria halotolerans sp nov., an actinobacterium isolated from a saline soil in China
Shu-Kun Tang et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)
Novel Campylobacter lari-like bacteria from humans and molluscs: description of Campylobacter peloridis sp nov., Campylobacter lari subsp concheus subsp nov and Campylobacter lari subsp lari subsp nov.
Lies Debruyne et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)
Leptospira kmetyi sp nov., isolated from an environmental source in Malaysia
Andrew T. Slack et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)
Airway Infection with a Novel Cupriavidus Species in Persons with Cystic Fibrosis
Wiltrud Maria Kalka-Moll et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2009)
Implanted-Port-Catheter-Related Sepsis Caused by Acidovorax avenae and Methicillin-Sensitive Staphylococcus aureus
Alpin D. Malkan et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2009)
Use of broad range 16S rDNA PCR in clinical microbiology
Sushama Sontakke et al.
JOURNAL OF MICROBIOLOGICAL METHODS (2009)
The versatility and adaptation of bacteria from the genus Stenotrophomonas
Robert P. Ryan et al.
NATURE REVIEWS MICROBIOLOGY (2009)
Validation of partial rpoB gene sequence analysis for the identification of clinically important and emerging Acinetobacter species
Vijay A. K. B. Gundi et al.
MICROBIOLOGY-SGM (2009)
Kytococcus aerolatus sp nov., isolated from indoor air in a room colonized with moulds
P. Kaempfer et al.
SYSTEMATIC AND APPLIED MICROBIOLOGY (2009)
Prevalence and genetic diversity of Bartonella species isolated from wild rodents in Japan
Kai Inoue et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)
Critical evaluation of two primers commonly used for amplification of bacterial 16S rRNA genes
Jeremy A. Frank et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)
Predicting ultraviolet spectrum of single stranded and double stranded deoxyribonucleic acids
Andrey V. Tataurov et al.
BIOPHYSICAL CHEMISTRY (2008)
Then and now: use of 16S rDNA gene sequencing for bacterial identification and discovery of novel bacteria in clinical microbiology laboratories
P. C. Y. Woo et al.
CLINICAL MICROBIOLOGY AND INFECTION (2008)
Sepsis caused by Elizabethkingia miricola successfully treated with tigecycline and levofloxacin
O'Neil Green et al.
DIAGNOSTIC MICROBIOLOGY AND INFECTIOUS DISEASE (2008)
Streptococcus henryi sp nov and Streptococcus caballi sp nov., isolated from the hindgut of horses with oligofructose-induced laminitis
Gabriel J. Milinovich et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2008)
Transfer of Bacteroides splanchnicus to Odoribacter gen. nov as Odoribacter splanchnicus comb. nov., and description of Odoribacter denticanis sp nov., isolated from the crevicular spaces of canine periodontitis patients
John M. Hardham et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2008)
Lactococcus chungangensis sp nov., a lactic acid bacterium isolated from activated sludge foam
Sung-Lim Cho et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2008)
Devriesea agamarum gen. nov., sp nov., a novel actinobacterium associated with dermatitis and septicaemia in agamid lizards
An Martel et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2008)
Proposal of Yaniellaceae fam. nov., Yaniella gen. nov and Sinobaca gen. nov as replacements for the illegitimate prokaryotic names Yaniaceae Li et al. 2005, Yania Li et al. 2004, emend Li et al. 2005, and Sinococcus Li et al. 2006, respectively
Wen-Jun Li et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2008)
Pediococcus argentinicus sp nov from Argentinean fermented wheat flour and identification of Pediococcus species by pheS, rpoA and atpA sequence analysis
Katrien De Bruyne et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2008)
Acidovorax caeni sp nov., a denitrifying species with genetically diverse isolates from activated sludge
Kim Heylen et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2008)
Reclassification of Clostridium coccoides, Ruminococcus hansenii, Ruminococcus hydrogenotrophicus, Ruminococcus luti, Ruminococcus productus and Ruminococcus schinkii as Blautia coccoides gen. nov., comb. nov., Blautia hansenii comb. nov., Blautia hydrogenotrophica comb. nov., Blautia luti comb. nov., Blautia producta comb. nov., Blautia schinkii comb. nov and description of Blautia wexlerae sp nov., isolated from human faeces
Chengxu Liu et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2008)
Evaluation of matrix-assisted laser desorption ionization-time-of-flight mass spectrometry in comparison to 16S rRNA gene sequencing for species identification of nonfermenting bacteria
A. Mellmann et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2008)
Identities of Arthrobacter spp. and Arthrobacter-like bacteria encountered in human clinical specimens
Irene S. Mages et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2008)
Helcococcus ovis, an emerging pathogen in bovine valvular endocarditis
Peter Kutzer et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2008)
Identities of Microbacterium spp. Encountered in Human Clinical Specimens
Kathrina Gneiding et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2008)
Genetic classification and distinguishing of Staphylococcus species based on different partial gap, 16S rRNA, hsp60, rpoB, sodA, and tuf gene sequences
B. Ghebremedhin et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2008)
The potential and challenges of nanopore sequencing
Daniel Branton et al.
NATURE BIOTECHNOLOGY (2008)
Comparative phylogenies of Burkholderia, Ralstonia, Comamonas, Brevundimonas and related organisms derived from rpoB, gyrB and rrs gene sequences
Lineda Ait Tayeb et al.
RESEARCH IN MICROBIOLOGY (2008)
Genetic diversity and phylogenetic relationships of bacteria belonging to the Ochrobactrum-Brucella group by recA and 16S rRNA gene-based comparative sequence analysis
Holger C. Scholz et al.
SYSTEMATIC AND APPLIED MICROBIOLOGY (2008)
Knoellia aerolata sp nov., isolated from an air sample in Korea
Hang-Yeon Weon et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2007)
Brachybacterium zhongshanense sp nov., a cellulose-decomposing bacterium from sediment along the Qijiang River, Zhongshan City, China
Guoxia Zhang et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2007)
Cellulosimicrobium terreum sp nov., isolated from soil
Jung-Hoon Yoon et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2007)
The Human Microbiome Project
Peter J. Turnbaugh et al.
NATURE (2007)
Dolosigranulum pigrum causing nosocomial pneumonia and septicemia
Herve Lecuyer et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2007)
Mycobacterium species identification -: A new approach via dnaJ gene sequencing
Makiko Yamada-Noda et al.
SYSTEMATIC AND APPLIED MICROBIOLOGY (2007)
Microbial proteomics: a mass spectrometry primer for biologists
Robert Lj Graham et al.
MICROBIAL CELL FACTORIES (2007)
Improved DNA sequencing quality and efficiency using an optimized fast cycle sequencing protocol
Adam R. Platt et al.
BIOTECHNIQUES (2007)
Rapid identification of staphylococci isolated in clinical microbiology laboratories by matrix-assisted laser desorption ionization - Time of flight mass spectrometry
Etienne Carbonnelle et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2007)
Peptoniphilus gorbachii sp nov., Peptoniphilus olsenii sp nov., and Anaerococcus murdochii sp nov isolated from clinical specimens of human origin
Yuli Song et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2007)
The dnaJ gene as a novel phylogenetic marker for identification of Vibrio species
Pham Hong Nhung et al.
SYSTEMATIC AND APPLIED MICROBIOLOGY (2007)
Cellulomonas composti sp nov., a cellulolytic bacterium isolated from cattle farm compost
Myung-Suk Kang et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2007)
Janibacter corallicola sp nov., isolated from coral in Palau
Akiko Kageyama et al.
JOURNAL OF GENERAL AND APPLIED MICROBIOLOGY (2007)
Effect of primer mismatch, annealing temperature and PCR cycle number on 16S rRNA gene-targetting bacterial community analysis
Rita Sipos et al.
FEMS MICROBIOLOGY ECOLOGY (2007)
Detection and identification of microorganisms by gene amplification and sequencing
Cathy A. Petti
CLINICAL INFECTIOUS DISEASES (2007)
Analysis of multiple differing copies of the 16S rRNA gene in five clinical isolates and three type strains of Nocardia species and implications for species assignment
Patricia S. Conville et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2007)
Identification of Haematobacter, a new genus of aerobic gram-negative rods isolated from clinical specimens, and reclassification of Rhodobacter massiliensis as Haematobacter massiliensis comb. nov.
Leta O. Helsel et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2007)
Vagococcus elongatus sp nov, isolated from a swine-manure storage pit
Paul A. Lawson et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2007)
Suitability of partial 16S ribosomal RNA gene sequence analysis for the identification of dangerous bacterial pathogens
W. Ruppitsch et al.
JOURNAL OF APPLIED MICROBIOLOGY (2007)
Identification of lactic acid bacteria from fermented tea leaves (miang) in Thailand and proposals of Lactobacillus thailandensis sp nov., Lactobacillus camelliae sp nov., and Pediococcus siamensis sp nov.
Somboon Tanasupawat et al.
JOURNAL OF GENERAL AND APPLIED MICROBIOLOGY (2007)
Use of 16S rRNA and rpoB genes as molecular markers for microbial ecology studies
Rebecca J. Case et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)
Invasive Streptomyces infections - Six cases and literature review
Mona Kapadia et al.
AMERICAN JOURNAL OF CLINICAL PATHOLOGY (2007)
dnaJ gene sequence-based assay for species identification and phylogenetic grouping in the genus Staphylococcus
Mohammad Monir Shah et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2007)
Aerococcus suis sp nov., isolated from clinical specimens from swine
A. I. Vela et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2007)
Application of SmartGene IDNS software to partial 16S rRNA gene sequences for a diverse group of bacteria in a clinical laboratory
Keith E. Simmon et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2006)
Magnetic particles for the separation and purification of nucleic acids
Sonja Berensmeier
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2006)
16S rRNA sequencing in routine bacterial identification: A 30-month experiment
S. Mignard et al.
JOURNAL OF MICROBIOLOGICAL METHODS (2006)
Pannonibacter phragmitetus, described from a Hungarian soda lake in 2003, had been recognized several decades earlier from human blood cultures as Achromobacter groups B and E
Barry Holmes et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2006)
Detection by broad-range real-time PCR assay of Chlamydia species infecting human and animals
P. Goldschmidt et al.
BRITISH JOURNAL OF OPHTHALMOLOGY (2006)
Dermacoccus barathri sp nov and Dermacoccus profundi sp nov., novel actinomycetes isolated from deep-sea mud of the Mariana Trench
Wasu Pathom-aree et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2006)
First report of bacteremia by Asaia bogorensis, in a patient with a history of intravenous-drug abuse
Tamara Tuuminen et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2006)
Kocuria himachalensis sp nov., an actinobacterium isolated from the Indian Himalayas
S. Mayilraj et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2006)
Enterococcus caccae sp nov., isolated from human stools
Maria da Gloria S. Carvalho et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2006)
Dermacoccus abyssi sp nov., a piezotolerant actinomycete isolated from the Mariana Trench
Wasu Pathom-aree et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2006)
Genetic relatedness within the genus Campylobacter inferred from rpoB sequences
Boena M. Korczak et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2006)
Streptococcus massiliensis sp nov., isolated from a patient blood culture
Olga O. Glazunova et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2006)
Kocuria aegyptia sp nov., a novel actinobacterium isolated from a saline, alkaline desert soil in Egypt
WJ Li et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2006)
An assessment of the efficiency of fungal DNA extraction methods for maximizing the detection of medically important fungi using PCR
A Karakousis et al.
JOURNAL OF MICROBIOLOGICAL METHODS (2006)
Characterization of clinical isolates previously identified as Oerskovia turbata:: proposal of Cellulosimicrobium funkei sp nov and emended description of the genus Cellulosimicrobium
JM Brown et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2006)
Clinical and laboratory features of the Nocardia spp. based on current molecular taxonomy
BA Brown-Elliott et al.
CLINICAL MICROBIOLOGY REVIEWS (2006)
Analysis of 525 samples to determine the usefulness of PCR amplification and sequencing of the 16S rRNA gene for diagnosis of bone and joint infections
F Fenollar et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2006)
Usefulness of the MicroSeq 500 16S rDNA bacterial identification system for identification of anaerobic gram positive bacilli isolated from blood cultures
SKP Lau et al.
JOURNAL OF CLINICAL PATHOLOGY (2006)
Molecular analysis of the bacterial microbiota in the human stomach
EM Bik et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Pediococcus cellicola sp nov., a novel lactic acid coccus isolated from a distilled-spirit-fermenting cellar
B Zhang et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2005)
Staphylococcus simiae sp nov., isolated from South American squirrel monkeys
R Pantucek et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2005)
Phylogeny of the Enterobacteriaceae based on genes encoding elongation factor Tu and F-ATPase β-subunit
S Paradis et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2005)
Contribution of a broad range polymerase chain reaction to the diagnosis of osteoarticular infections caused by Kingella kingae -: Description of twenty-four recent pediatric diagnoses
I Verdier et al.
PEDIATRIC INFECTIOUS DISEASE JOURNAL (2005)
High level of sequence diversity in the 16S rRNA genes of Haemophilus influenzae isolates is useful for molecular subtyping
CT Sacchi et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2005)
Bacteremia caused by an undescribed species of Janibacter
J Loubinoux et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2005)
Description of Kingella potus sp nov., an organism isolated from a wound caused by an animal bite
PA Lawson et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2005)
Six novel Arthrobacter species isolated from deteriorated mural paintings
J Heyrman et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2005)
Pseudomonas argentinensis sp nov., a novel yellow pigment-producing bacterial species, isolated from rhizospheric soil in Cordoba, Argentina
A Peix et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2005)
Comparison of genotypic and phenotypic methods for species-level identification of clinical isolates of coagulase-negative staphylococci
E Heikens et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2005)
Comparison between rpoB and 16S rRNA gene sequencing for molecular identification of 168 clinical isolates of Corynebacterium
A Khamis et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2005)
Molecular identification of Capnocytophaga spp. via 16S rRNA PCR-restriction fragment length polymorphism analysis
M Ciantar et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2005)
First description of Curtobacterium spp. isolated from human clinical specimens
G Funke et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2005)
16S-23S rRNA gene internal transcribed spacer sequences for analysis of the phylogenetic relationships among species of the genus Porphyromonas
G Conrads et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2005)
Nomenclature and taxonomy of the genus Salmonella
BJ Tindall et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2005)
Reclassification of strain CCM 132, previously classified as Kocuria varians, as Kocuria carniphila sp nov.
L Tvrzova et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2005)
Advenella incenata gen. nov., sp nov., a novel member of the Alcaligenaceae, isolated from various clinical samples
T Coenye et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2005)
rpoB gene sequence-based identification of aerobic gram-positive cocci of the genera Streptococcus, Enterococcus, Gemella, Abiotrophia, and Granulicatella
M Drancourt et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2004)
Evaluation of partial 16S ribosomal DNA sequencing for idefitification of Nocardia species by using the MicroSeq 500 system with an expanded database
JL Cloud et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2004)
Impact of 16S rRNA gene sequence analysis for identification of bacteria on clinical microbiology and infectious diseases
JE Clarridge
CLINICAL MICROBIOLOGY REVIEWS (2004)
Cardiac valves in patients with Whipple endocarditis:: Microbiological, molecular, quantitative histologic and immunohistochemical studies of 5 patients
H Lepidi et al.
JOURNAL OF INFECTIOUS DISEASES (2004)
Genetic diversity among Pasteurella multocida strains of avian, bovine, ovine and porcine origin from England and Wales by comparative sequence analysis of the 16S rRNA gene
RL Davies
MICROBIOLOGY-SGM (2004)
Erysipelothrix inopinata sp nov., isolated in the course of sterile filtration of vegetable peptone broth, and description of Erysipelotrichaceae fam. nov.
S Verbarg et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2004)
Taxonomy of the genus Cupriavidus:: a tale of lost and found
P Vandamme et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2004)
Identification of a novel Brevibacterium species isolated from humans and description of Brevibacterium sanguinis sp nov.
G Wauters et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2004)
Development and evaluation of a quality-controlled ribosomal sequence database for 16S ribosomal DNA-based identification of Staphylococcus species
K Becker et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2004)
Recommendations for treatment of human infections caused by Bartonella species
JM Rolain et al.
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2004)
The sequence heterogenicities among 16S rRNA genes of Salmonella serovars and the effects on the specificity of the primers designed
CK Lin et al.
INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY (2004)
Molecular epidemiologic evaluation of endocarditis due to Oerskovia turbata and CDC group A-3 associated with contaminated homograft valves
MM McNeil et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2004)
DNA-DNA relatedness and phylogenetic positions of Slackia exigua, Slackia heliotrinireducens, Eggerthella lenta, and other related bacteria
F Nakazawa et al.
ORAL MICROBIOLOGY AND IMMUNOLOGY (2004)
Identification and distribution of insertion sequences of Paracoccus solventivorans
D Bartosik et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2003)
Review and re-analysis of domain-specific 16S primers
GC Baker et al.
JOURNAL OF MICROBIOLOGICAL METHODS (2003)
Kerstersia gyiorum gen. nov., sp nov., a novel Alcaligenes faecalis-like organism isolated from human clinical samples, and reclassification of Alcaligenes denitrificans Ruger and Tan 1983 as Achromobacter denitrificans comb nov.
T Coenye et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2003)
Diversity and significance of Burkholderia species occupying diverse ecological niches
T Coenye et al.
ENVIRONMENTAL MICROBIOLOGY (2003)
Development of broad-range 16S rDNA PCR for use in the routine diagnostic clinical microbiology service
KA Harris et al.
JOURNAL OF MEDICAL MICROBIOLOGY (2003)
Characterization of several Psychrobacter strains isolated from Antarctic environments and description of Psychrobacter luti sp nov and Psychrobacter fozii sp nov.
N Bozal et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2003)
Corynebacterium sphenisci sp nov., isolated from wild penguins
J Goyache et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2003)
Multiple sequence alignment with the Clustal series of programs
R Chenna et al.
NUCLEIC ACIDS RESEARCH (2003)
Intra-chromosomal heterogeneity between the four 16S rRNA gene copies in the genus Veillonella:: implications for phylogeny and taxonomy
H Marchandin et al.
MICROBIOLOGY-SGM (2003)
Phylogenetic relationships between Bacillus species and related genera inferred from comparison of 3′ end 16S rDNA and 5′ end 16S-23S ITS nucleotide sequences
D Xu et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2003)
Usefulness of the MicroSeq 500 16S ribosomal DNA-based bacterial identification system for identification of clinically significant bacterial isolates with ambiguous biochemical profiles
PCY Woo et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2003)
Impact of genotypic studies on mycobacterial taxonomy: the new mycobacteria of the 1990s
E Tortoli
CLINICAL MICROBIOLOGY REVIEWS (2003)
Evaluation of the MicroSeq system for identification of mycobacteria by 16S ribosomal DNA sequencing and its integration into a routine clinical mycobacteriology laboratory
L Hall et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2003)
Bacteremia caused by a novel species of Sphingobacterium
H Tronel et al.
CLINICAL MICROBIOLOGY AND INFECTION (2003)
Use of the dnaJ gene for the detection and identification of all Legionella pneumophila serogroups and description of the primers used to detect 16S rDNA gene sequences of major members of the genus Legionella
HS Liu et al.
MICROBIOLOGY AND IMMUNOLOGY (2003)
Sequence diversity of Neisseria meningitidis 16S rRNA genes and use of 16S rRNA gene sequencing as a molecular subtyping tool
CT Sacchi et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2002)
Comparison of different decontamination methods for reagents to detect low concentrations of bacterial 16S DNA by real-time-PCR
S Klaschik et al.
MOLECULAR BIOTECHNOLOGY (2002)
Central venous catheter-related bacteremia due to Tsukamurella species in the immunocompromised host:: A case series and review of the literature
MA Schwartz et al.
CLINICAL INFECTIOUS DISEASES (2002)
Characterization of unusual bacteria isolated from respiratory secretions of cystic fibrosis patients and description of Inquilinus limosus gen. nov., sp nov.
T Coenye et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2002)
Risk assessment models and contamination management: Implications for broad-range ribosomal DNA PCR as a diagnostic tool in medical bacteriology
BC Millar et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2002)
Enterococcus gilvus sp. nov. and Enterococcus pallens sp. nov. isolated from human clinical specimens
GJ Tyrrell et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2002)
rpoB gene sequence-based identification of Staphylococcus species
M Drancourt et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2002)
Knoellia sinensis gen. nov., sp nov and Knoellia subterranea sp nov., two novel actinobacteria isolated from a cave
I Groth et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2002)
Discrimination of Bacillus cereus and Bacillus thuringiensis with 16S rRNA and gyrB gene based PCR primers and sequencing of their annealing sites
ML Chen et al.
JOURNAL OF APPLIED MICROBIOLOGY (2002)
Streptococcus entericus sp nov., isolated from cattle intestine
AI Vela et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2002)
Rapid and accurate species-level identification of coagulase-negative staphylococci by using the sodA gene as a target
C Poyart et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2001)
Necessity of quality-controlled 16S rRNA gene sequence databases:: Identifying nontuberculous Mycobacterium species
CY Turenne et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2001)
Identification of Mycobacterium species by multiple-fluorescence PCR-single-strand conformation polymorphism analysis of the 16S rRNA gene
LM Gillman et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2001)
Facklamia miroungae sp nov., from a juvenile southern elephant seal (Mirounga leonina)
L Hoyles et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2001)
Epidemiologic and clinical characteristics of Bartonella quintana and Bartonella henselae endocarditis -: A study of 48 patients
PE Fournier et al.
MEDICINE (2001)
Design and evaluation of PCR primers to amplify bacterial 16S ribosomal DNA fragments used for community fingerprinting
K Watanabe et al.
JOURNAL OF MICROBIOLOGICAL METHODS (2001)
16S ribosomal DNA sequence analysis distinguishes biotypes of Streptococcus bovis:: Streptococcus bovis biotype II/2 is a separate genospecies and the predominant clinical isolate in adult males
JE Clarridge et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2001)
Aerococcus urinaehominis sp nov., isolated from human urine
PA Lawson et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2001)
Use of rpoB gene analysis for detection and identification of Bartonella species
P Renesto et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2001)
Emergence of diverse Helicobacter species in the pathogenesis of gastric and enterohepatic diseases
JV Solnick et al.
CLINICAL MICROBIOLOGY REVIEWS (2001)
A simple and sensitive method to extract bacterial, yeast and fungal DNA from blood culture material
BC Miller et al.
JOURNAL OF MICROBIOLOGICAL METHODS (2000)
16S ribosomal DNA sequence analysis of a large collection of environmental and clinical unidentifiable bacterial isolates
M Drancourt et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2000)
Multiple independent origins of Shigella clones of Escherichia coli and convergent evolution of many of their characteristics
GM Pupo et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)
Emendation of Pseudomonas straminea Iizuka and Komagata 1963
M Uchino et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2000)
Phylogenetic analysis of the genus Thermoactinomyces based on 16S rDNA sequences
JH Yoon et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2000)
Vagococcus fessus sp nov., isolated from a seal and a harbour porpoise
L Hoyles et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2000)
Application of 16S rRNA gene sequencing to identify Bordetella hinzii as the causative agent of fatal septicemia
MM Kattar et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2000)
Classification of Proteus vulgaris biogroup 3 with recognition of Proteus hauseri sp nov., nom. rev. and unnamed Proteus genomospecies 4, 5 and 6
CM O'Hara et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2000)
Leuconostoc kimchii sp nov., a new species from kimchi
J Kim et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2000)