4.3 Review

Genetically encoded thiol redox-sensors in the zebrafish model: lessons for embryonic development and regeneration

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Review Developmental Biology

Recent advancements in understanding fin regeneration in zebrafish

Ivonne M. Sehring et al.

WILEY INTERDISCIPLINARY REVIEWS-DEVELOPMENTAL BIOLOGY (2020)

Article Biochemistry & Molecular Biology

A Quantitative Tissue-Specific Landscape of Protein Redox Regulation during Aging

Haopeng Xiao et al.

Review Cell & Tissue Engineering

Regeneration of the central nervous system-principles from brain regeneration in adult zebrafish

Alessandro Zambusi et al.

WORLD JOURNAL OF STEM CELLS (2020)

Article Biochemistry & Molecular Biology

MorphoSeq: Full Single-Cell Transcriptome Dynamics Up to Gastrulation in a Chordate

Hanna L. Sladitschek et al.

Review Cell Biology

Reactive oxygen species (ROS) as pleiotropic physiological signalling agents

Helmut Sies et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2020)

Article Biochemistry & Molecular Biology

Embryonic tissue differentiation is characterized by transitions in cell cycle dynamic-associated core promoter regulation

Joseph W. Wragg et al.

NUCLEIC ACIDS RESEARCH (2020)

Article Multidisciplinary Sciences

Real-time monitoring of peroxiredoxin oligomerization dynamics in living cells

Daniel Pastor-Flores et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2020)

Article Chemistry, Multidisciplinary

Biological chemistry of superoxide radicals

Christine C. Winterbourn

CHEMTEXTS (2020)

Review Cell Biology

Paracrine Mechanisms of Redox Signalling for Postmitotic Cell and Tissue Regeneration

Arnau Hervera et al.

TRENDS IN CELL BIOLOGY (2019)

Article Multidisciplinary Sciences

Genetic compensation triggered by mutant mRNA degradation

Mohamed A. El-Brolosy et al.

NATURE (2019)

Review Biochemistry & Molecular Biology

Developing zebrafish disease models for in vivo small molecule screens

Pui-Ying Lam et al.

CURRENT OPINION IN CHEMICAL BIOLOGY (2019)

Article Developmental Biology

Induction of interferon-stimulated genes and cellular stress pathways by morpholinos in zebrafish

Jason K. H. Lai et al.

DEVELOPMENTAL BIOLOGY (2019)

Article Developmental Biology

Mode systems for regeneration: zebrafish

Ines J. Marques et al.

DEVELOPMENT (2019)

Review Biochemistry & Molecular Biology

Circularly Permuted Fluorescent Protein-Based Indicators: History, Principles, and Classification

Alexander I. Kostyuk et al.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2019)

Review Neurosciences

The Zebrafish Visual System: From Circuits to Behavior

Johann H. Bollmann

ANNUAL REVIEW OF VISION SCIENCE, VOL 5 (2019)

Review Anatomy & Morphology

Tissue Regeneration Enhancer Elements: A Way to Unlock Endogenous Healing Power

KaHoua Yang et al.

DEVELOPMENTAL DYNAMICS (2019)

Article Multidisciplinary Sciences

Live imaging of leukocyte recruitment in a zebrafish model of chemical liver injury

Michelina Stoddard et al.

SCIENTIFIC REPORTS (2019)

Review Cell Biology

Expanding the CRISPR Toolbox in Zebrafish for Studying Development and Disease

Kaili Liu et al.

FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY (2019)

Article Cell Biology

Nano-Sampling and Reporter Tools to Study Metabolic Regulation in Zebrafish

Thomas Dickmeis et al.

FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY (2019)

Review Biology

Circadian Clocks in Fish-What Have We Learned so far?

Inga A. Froland Steindal et al.

BIOLOGY-BASEL (2019)

Article Biochemistry & Molecular Biology

A role for 2-Cys peroxiredoxins in facilitating cytosolic protein thiol oxidation

Sarah Stoecker et al.

NATURE CHEMICAL BIOLOGY (2018)

Article Cell Biology

TGF-β Family Signaling in Early Vertebrate Development

Joseph Zinski et al.

COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY (2018)

Review Physiology

Roles of pH in control of cell proliferation

M. Flinck et al.

ACTA PHYSIOLOGICA (2018)

Review Biochemistry & Molecular Biology

The Conundrum of Hydrogen Peroxide Signaling and the Emerging Role of Peroxiredoxins as Redox Relay Hubs

Sarah Stoecker et al.

ANTIOXIDANTS & REDOX SIGNALING (2018)

Review Biochemistry & Molecular Biology

Redox Signaling Mechanisms in Nervous System Development

Mauricio Olguin-Albuerne et al.

ANTIOXIDANTS & REDOX SIGNALING (2018)

Article Biochemistry & Molecular Biology

Electrochemical Quantification of Extracellular Local H2O2 Kinetics Originating from Single Cells

Monika Bozem et al.

ANTIOXIDANTS & REDOX SIGNALING (2018)

Article Chemistry, Multidisciplinary

SypHer3s: a genetically encoded fluorescent ratiometric probe with enhanced brightness and an improved dynamic range

Y. G. Ermakova et al.

CHEMICAL COMMUNICATIONS (2018)

Review Biochemistry & Molecular Biology

Small-molecule luminescent probes for the detection of cellular oxidizing and nitrating species

Jacek Zielonka et al.

FREE RADICAL BIOLOGY AND MEDICINE (2018)

Article Developmental Biology

Linking wound response and inflammation to regeneration in the zebrafish larval fin

Henry Hamilton Roehl

INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY (2018)

Article Developmental Biology

Role of the immune response in initiating central nervous system regeneration in vertebrates: learning from the fish

Viktoria Bosak et al.

INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY (2018)

Article Neurosciences

nox2/cybb Deficiency Affects Zebrafish Retinotectal Connectivity

Cory J. Weaver et al.

JOURNAL OF NEUROSCIENCE (2018)

Article Biotechnology & Applied Microbiology

Simultaneous lineage tracing and cell-type identification using CRISPR-Cas9-induced genetic scars

Bastiaan Spanjaard et al.

NATURE BIOTECHNOLOGY (2018)

Article Multidisciplinary Sciences

Single-cell reconstruction of developmental trajectories during zebrafish embryogenesis

Jeffrey A. Farrell et al.

SCIENCE (2018)

Article Multidisciplinary Sciences

Single-cell mapping of gene expression landscapes and lineage in the zebrafish embryo

Daniel E. Wagner et al.

SCIENCE (2018)

Review Cell Biology

Nerves, H2O2 and Shh: Three players in the game of regeneration

Francesca Meda et al.

SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY (2018)

Review Cell Biology

From birth to death: A role for reactive oxygen species in neuronal development

Carlos Wilson et al.

SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY (2018)

Article Biochemistry & Molecular Biology

Sorting cells alters their redox state and cellular metabolome

Elizabeth M. Llufrio et al.

REDOX BIOLOGY (2018)

Article Multidisciplinary Sciences

Damage-induced reactive oxygen species enable zebrafish tail regeneration by repositioning of Hedgehog expressing cells

Maria Montserrat Garcia Romero et al.

NATURE COMMUNICATIONS (2018)

Article Cell Biology

Oxidative Stress Orchestrates Cell Polarity to Promote Embryonic Wound Healing

Miranda Hunter et al.

DEVELOPMENTAL CELL (2018)

Review Cell Biology

A Regeneration Toolkit

Mayssa H. Mokalled et al.

DEVELOPMENTAL CELL (2018)

Article Multidisciplinary Sciences

Early redox activities modulate Xenopus tail regeneration

Fernando Ferreira et al.

NATURE COMMUNICATIONS (2018)

Review Cell & Tissue Engineering

Comparative regenerative mechanisms across different mammalian tissues

Siiri E. Iismaa et al.

NPJ REGENERATIVE MEDICINE (2018)

Article Biochemistry & Molecular Biology

Real-time quantification of subcellular H2O2 and glutathione redox potential in living cardiovascular tissues

Emiliano Panieri et al.

FREE RADICAL BIOLOGY AND MEDICINE (2017)

Review Biochemistry & Molecular Biology

NADPH oxidases as drug targets and biomarkers in neurodegenerative diseases: What is the evidence?

Silvia Sorce et al.

FREE RADICAL BIOLOGY AND MEDICINE (2017)

Review Biochemistry & Molecular Biology

Production of superoxide and hydrogen peroxide from specific mitochondrial sites under different bioenergetic conditions

Hoi-Shan Wong et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2017)

Review Immunology

Efforts to enhance blood stem cell engraftment: Recent insights from zebrafish hematopoiesis

Julie R. Perlin et al.

JOURNAL OF EXPERIMENTAL MEDICINE (2017)

Article Genetics & Heredity

Guidelines for morpholino use in zebrafish

Didier Y. R. Stainier et al.

PLOS GENETICS (2017)

Article Multidisciplinary Sciences

Distinct Levels of Reactive Oxygen Species Coordinate Metabolic Activity with Beta-cell Mass Plasticity

Ezzaldin Ahmed Alfar et al.

SCIENTIFIC REPORTS (2017)

Review Biochemistry & Molecular Biology

Oxidative Stress

Helmut Sies et al.

ANNUAL REVIEW OF BIOCHEMISTRY, VOL 86 (2017)

Article Cell & Tissue Engineering

Bioelectric regulation of innate immune system function in regenerating and intact Xenopus laevis

Jean-Francois Pare et al.

NPJ REGENERATIVE MEDICINE (2017)

Review Developmental Biology

Reduce, reuse, recycle - Developmental signals in spinal cord regeneration

Marcos Julian Cardozo et al.

DEVELOPMENTAL BIOLOGY (2017)

Review Biochemistry & Molecular Biology

Catalase, a remarkable enzyme: targeting the oldest antioxidant enzyme to find a new cancer treatment approach

Christophe Glorieux et al.

BIOLOGICAL CHEMISTRY (2017)

Article Biophysics

Image-Based Measurement of H2O2 Reaction Diffusion in Wounded Zebrafish Larvae

Mark Jelcic et al.

BIOPHYSICAL JOURNAL (2017)

Review Cell Biology

Molecular mechanism for cyclic generation of somites: Lessons from mice and zebrafish

Taijiro Yabe et al.

DEVELOPMENT GROWTH & DIFFERENTIATION (2016)

Article Biochemistry & Molecular Biology

Nerves Control Redox Levels in Mature Tissues Through Schwann Cells and Hedgehog Signaling

Francesca Meda et al.

ANTIOXIDANTS & REDOX SIGNALING (2016)

Review Biochemistry & Molecular Biology

Dissecting Redox Biology Using Fluorescent Protein Sensors

Markus Schwarzlaender et al.

ANTIOXIDANTS & REDOX SIGNALING (2016)

Article Cell Biology

The early wound signals

Philipp Niethammer

CURRENT OPINION IN GENETICS & DEVELOPMENT (2016)

Article Developmental Biology

Early bioelectric activities mediate redox-modulated regeneration

Fernando Ferreira et al.

DEVELOPMENT (2016)

Article Developmental Biology

Hydrogen peroxide (H2O2) controls axon pathfinding during zebrafish development

Carole Gauron et al.

DEVELOPMENTAL BIOLOGY (2016)

Article Biochemistry & Molecular Biology

IGFBP1 increases β-cell regeneration by promoting α-to β-cell transdifferentiation

Jing Lu et al.

EMBO JOURNAL (2016)

Review Biochemistry & Molecular Biology

Reciprocal Control of the Circadian Clock and Cellular Redox State - a Critical Appraisal

Marrit Putker et al.

MOLECULES AND CELLS (2016)

Article Multidisciplinary Sciences

Modulation of tissue repair by regeneration enhancer elements

Junsu Kang et al.

NATURE (2016)

Article Biochemistry & Molecular Biology

Real-time monitoring of basal H2O2 levels with peroxiredoxin-based probes

Bruce Morgan et al.

NATURE CHEMICAL BIOLOGY (2016)

Article Genetics & Heredity

Extensive Regulation of Diurnal Transcription and Metabolism by Glucocorticoids

Benjamin D. Weger et al.

PLOS GENETICS (2016)

Article Biochemistry & Molecular Biology

Fluorescent ratiometric pH indicator SypHer2: Applications in neuroscience and regenerative biology

Mikhail E. Matlashov et al.

BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS (2015)

Review Biochemistry & Molecular Biology

Redox-regulated fate of neural stem progenitor cells

Tim Prozorovski et al.

BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS (2015)

Review Medicine, Research & Experimental

Are reactive oxygen species still the basis for diabetic complications?

Elyse Di Marco et al.

CLINICAL SCIENCE (2015)

Article Cell Biology

Nerves Regulate Cardiomyocyte Proliferation and Heart Regeneration

Ahmed I. Mahmoud et al.

DEVELOPMENTAL CELL (2015)

Review Cell Biology

Morpholinos: Antisense and Sensibility

Martin Blum et al.

DEVELOPMENTAL CELL (2015)

Article Developmental Biology

Topographic wiring of the retinotectal connection in zebrafish

Elizabeth M. Kita et al.

DEVELOPMENTAL NEUROBIOLOGY (2015)

Article Multidisciplinary Sciences

Genetic compensation induced by deleterious mutations but not gene knockdowns

Andrea Rossi et al.

NATURE (2015)

Review Immunology

NADPH oxidases: an overview from structure to innate immunity-associated pathologies

Arvind Panday et al.

CELLULAR & MOLECULAR IMMUNOLOGY (2015)

Review Biochemistry & Molecular Biology

The challenges of using fluorescent probes to detect and quantify specific reactive oxygen species in living cells

Christine C. Winterbourn

BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS (2014)

Article Developmental Biology

Denervation impairs regeneration of amputated zebrafish fins

Mariana G. Simoes et al.

BMC DEVELOPMENTAL BIOLOGY (2014)

Article Cell Biology

Hydrogen peroxide primes heart regeneration with a derepression mechanism

Peidong Han et al.

CELL RESEARCH (2014)

Review Biochemistry & Molecular Biology

ROS Function in Redox Signaling and Oxidative Stress

Michael Schieber et al.

CURRENT BIOLOGY (2014)

Article Developmental Biology

Stem cells and the impact of ROS signaling

Carolina L. Bigarella et al.

DEVELOPMENT (2014)

Article Developmental Biology

Macrophages modulate adult zebrafish tail fin regeneration

Timothy A. Petrie et al.

DEVELOPMENT (2014)

Editorial Material Developmental Biology

Out with the old, in with the new: reassessing morpholino knockdowns in light of genome editing technology

Stefan Schulte-Merker et al.

DEVELOPMENT (2014)

Review Cardiac & Cardiovascular Systems

Imaging dynamic redox processes with genetically encoded probes

Dania Ezerina et al.

JOURNAL OF MOLECULAR AND CELLULAR CARDIOLOGY (2014)

Review Cell Biology

Cellular mechanisms and physiological consequences of redox-dependent signalling

Kira M. Holmstroem et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2014)

Article Multidisciplinary Sciences

V-ATPase Proton Pumping Activity Is Required for Adult Zebrafish Appendage Regeneration

Joana Monteiro et al.

PLOS ONE (2014)

Review Developmental Biology

Cytonemes and the dispersion of morphogens

Thomas B. Kornberg

WILEY INTERDISCIPLINARY REVIEWS-DEVELOPMENTAL BIOLOGY (2014)

Article Biochemistry & Molecular Biology

HyPer-3: A Genetically Encoded H2O2 Probe with Improved Performance for Ratiometric and Fluorescence Lifetime Imaging

Dmitry S. Bilan et al.

ACS CHEMICAL BIOLOGY (2013)

Review Cell Biology

Enhancer and gene traps for molecular imaging and genetic analysis in zebrafish

Le A. Trinh et al.

DEVELOPMENT GROWTH & DIFFERENTIATION (2013)

Review Biochemistry & Molecular Biology

Oxidant Sensing by Reversible Disulfide Bond Formation

Claudia M. Cremers et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2013)

Article Neurosciences

WldS and PGC-1α Regulate Mitochondrial Transport and Oxidation State after Axonal Injury

Kelley C. O'Donnell et al.

JOURNAL OF NEUROSCIENCE (2013)

Review Biochemistry & Molecular Biology

Generation and application of signaling pathway reporter lines in zebrafish

Enrico Moro et al.

MOLECULAR GENETICS AND GENOMICS (2013)

Review Developmental Biology

Neurogenesis in zebrafish - from embryo to adult

Rebecca Schmidt et al.

NEURAL DEVELOPMENT (2013)

Review Cell Biology

Gastrulation: Making and Shaping Germ Layers

Lila Solnica-Krezel et al.

ANNUAL REVIEW OF CELL AND DEVELOPMENTAL BIOLOGY, VOL 28 (2012)

Article Cell Biology

Metabolic differentiation in the embryonic retina

Michalis Agathocleous et al.

NATURE CELL BIOLOGY (2012)

Article Multidisciplinary Sciences

In Vivo Cell and Tissue Dynamics Underlying Zebrafish Fin Fold Regeneration

Rita Mateus et al.

PLOS ONE (2012)

Article Biochemistry & Molecular Biology

Smooth Muscle Tension Induces Invasive Remodeling of the Zebrafish Intestine

Christoph Seiler et al.

PLOS BIOLOGY (2012)

Review Physiology

Zebrafish in Endocrine Systems: Recent Advances and Implications for Human Disease

Heiko Loehr et al.

ANNUAL REVIEW OF PHYSIOLOGY, VOL 73 (2011)

Article Biochemistry & Molecular Biology

Dynamic Regulation of the Mitochondrial Proton Gradient during Cytosolic Calcium Elevations

Damon Poburko et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2011)

Review Cell Biology

Signal transduction by reactive oxygen species

Toren Finkel

JOURNAL OF CELL BIOLOGY (2011)

Article Multidisciplinary Sciences

Lyn is a redox sensor that mediates leukocyte wound attraction in vivo

Sa Kan Yoo et al.

NATURE (2011)

Article Biochemistry & Molecular Biology

Hydrogen Peroxide Promotes Injury-Induced Peripheral Sensory Axon Regeneration in the Zebrafish Skin

Sandra Rieger et al.

PLOS BIOLOGY (2011)

Review Biochemistry & Molecular Biology

Reactive oxygen species: A radical role in development?

David Hernandez-Garcia et al.

FREE RADICAL BIOLOGY AND MEDICINE (2010)

Article Multidisciplinary Sciences

Primary contribution to zebrafish heart regeneration by gata4+ cardiomyocytes

Kazu Kikuchi et al.

NATURE (2010)

Article Developmental Biology

Simplet controls cell proliferation and gene transcription during zebrafish caudal fin regeneration

Caghan Kizil et al.

DEVELOPMENTAL BIOLOGY (2009)

Article Biochemistry & Molecular Biology

Proximity-based Protein Thiol Oxidation by H2O2-scavenging Peroxidases

Marcus Gutsche et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2009)

Review Cell Biology

Long and winding roads: Testis differentiation in zebrafish

Laszlo Orban et al.

MOLECULAR AND CELLULAR ENDOCRINOLOGY (2009)

Review Cell Biology

How to make a teleost adenohypophysis: Molecular pathways of pituitary development in zebrafish

Hans-Martin Pogoda et al.

MOLECULAR AND CELLULAR ENDOCRINOLOGY (2009)

Article Multidisciplinary Sciences

A tissue-scale gradient of hydrogen peroxide mediates rapid wound detection in zebrafish

Philipp Niethammer et al.

NATURE (2009)

Article Multidisciplinary Sciences

Antioxidants prevent health-promoting effects of physical exercise in humans

Michael Ristow et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Review Physiology

V-ATPase functions in normal and disease processes

Ayana Hinton et al.

PFLUGERS ARCHIV-EUROPEAN JOURNAL OF PHYSIOLOGY (2009)

Article Biochemistry & Molecular Biology

Glutathione peroxidase family - an evolutionary overview

Rogerio Margis et al.

FEBS JOURNAL (2008)

Article Microscopy

Confocal imaging of glutathione redox potential in living plant cells

M. Schwarzlaender et al.

JOURNAL OF MICROSCOPY (2008)

Article Biochemical Research Methods

Real-time imaging of the intracellular glutathione redox potential

Marcus Gutscher et al.

NATURE METHODS (2008)

Article Multidisciplinary Sciences

Quantifying changes in the thiol redox proteome upon oxidative stress in vivo

Lars I. Leichert et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)

Article Multidisciplinary Sciences

Reconstruction of Zebrafish Early Embryonic Development by Scanned Light Sheet Microscopy

Philipp J. Keller et al.

SCIENCE (2008)

Review Developmental Biology

Mitochondria, redox signaling and axis specification in metazoan embryos

James A. Coffman et al.

DEVELOPMENTAL BIOLOGY (2007)

Review Medicine, General & Internal

Mortality in randomized trials of antioxidant supplements for primary and secondary prevention - Systematic review and meta-analysis

Goran Bjelakovic et al.

JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION (2007)

Article Cell Biology

Proton pump-rich cell secretes acid in skin of zebrafish larvae

LY Lin et al.

AMERICAN JOURNAL OF PHYSIOLOGY-CELL PHYSIOLOGY (2006)

Article Evolutionary Biology

Charles Manning Child (1869-1954): The past, present, and future of metabolic signaling

NW Blackstone

JOURNAL OF EXPERIMENTAL ZOOLOGY PART B-MOLECULAR AND DEVELOPMENTAL EVOLUTION (2006)

Review Genetics & Heredity

Molecular genetics of axis formation in zebrafish

AF Schier et al.

ANNUAL REVIEW OF GENETICS (2005)

Article Biochemistry & Molecular Biology

A thiol peroxidase is an H2O2 receptor and redox-transducer in gene activation

A Delaunay et al.

Review Genetics & Heredity

Timeline - Headwaters of the zebrafish emergence of a new model vertebrate

DJ Grunwald et al.

NATURE REVIEWS GENETICS (2002)

Review Genetics & Heredity

The art and design of genetic screens: Zebrafish

EE Patton et al.

NATURE REVIEWS GENETICS (2001)

Article Anatomy & Morphology

Identification of nodal signaling targets by array analysis of induced complex probes

T Dickmeis et al.

DEVELOPMENTAL DYNAMICS (2001)

Article Biochemistry & Molecular Biology

Structural basis of the redox switch in the OxyR transcription factor

HJ Choi et al.