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Belinda Vangchhia et al.
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Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees
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Comparative virulotyping of extended-spectrum cephalosporin-resistant E. coli isolated from broilers, humans on broiler farms and in the general population and UTI patients
Angela H. A. M. van Hoek et al.
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SiYu Guo et al.
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Marc Sola-Gines et al.
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Rodrigo Guabiraba et al.
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Prokka: rapid prokaryotic genome annotation
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Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger et al.
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Pandemic lineages of extraintestinal pathogenic Escherichia coli
L. W. Riley
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Overlapped Sequence Types (STs) and Serogroups of Avian Pathogenic (APEC) and Human Extra-Intestinal Pathogenic (ExPEC) Escherichia coli Isolated in Brazil
Renato Pariz Maluta et al.
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Population structure and virulence content of avian pathogenic Escherichia coli isolated from outbreaks in Sri Lanka
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Kirsty Kemmett et al.
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Poultry as reservoir for extraintestinal pathogenic Escherichia coli O45:K1:H7-B2-ST95 in humans
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Ea Zankari et al.
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Mette V. Larsen et al.
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SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
Anton Bankevich et al.
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Plasmids carrying blaCTX-M-1 and qnr genes in Escherichia coli isolates from an equine clinic and a horseback riding centre
Monika Dolejska et al.
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Kelly A. Tivendale et al.
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Olivier Tenaillon et al.
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Caroline Vincent et al.
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Christa Ewers et al.
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Extraintestinal pathogenic Escherichia coli O1:K1:H7/NM from human and avian origin: detection of clonal groups B2 ST95 and D ST59 with different host distribution
Azucena Mora et al.
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Timothy J. Johnson et al.
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Identification of Minimal Predictors of Avian Pathogenic Escherichia coli Virulence for Use as a Rapid Diagnostic Tool
Timothy J. Johnson et al.
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Maryvonne Moulin-Schouleur et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2007)
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TJ Johnson et al.
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D Ideses et al.
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FTW Jordan et al.
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KE Rodriguez-Siek et al.
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D Mokady et al.
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P Escobar-Páramo et al.
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JR Johnson et al.
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Role of virulence factors in resistance of avian pathogenic Escherichia coli to serum and in pathogenicity
M Mellata et al.
INFECTION AND IMMUNITY (2003)
Virulence factors of Escherichia coli serotypes associated with avian colisepticaemia
RM La Ragione et al.
RESEARCH IN VETERINARY SCIENCE (2002)
Extraintestinal pathogenic Escherichia coli: The other bad E coli
JR Johnson et al.
JOURNAL OF LABORATORY AND CLINICAL MEDICINE (2002)
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