相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Diverse hydrogen production and consumption pathways influence methane production in ruminants
Chris Greening et al.
ISME JOURNAL (2019)
Compendium of 4,941 rumen metagenome-assembled genomes for rumen microbiome biology and enzyme discovery
Robert D. Stewart et al.
NATURE BIOTECHNOLOGY (2019)
Cultivation and sequencing of rumen microbiome members from the Hungate1000 Collection
Rekha Seshadri et al.
NATURE BIOTECHNOLOGY (2018)
Microbiota composition, gene pool and its expression in Gir cattle (Bos indicus) rumen under different forage diets using metagenomic and metatranscriptomic approaches
Ramesh J. Pandit et al.
SYSTEMATIC AND APPLIED MICROBIOLOGY (2018)
Assembly of 913 microbial genomes from metagenomic sequencing of the cow rumen
Robert D. Stewart et al.
NATURE COMMUNICATIONS (2018)
Metatranscriptome Sequencing Reveals Insights into the Gene Expression and Functional Potential of Rumen Wall Bacteria
Evelyne Mann et al.
FRONTIERS IN MICROBIOLOGY (2018)
Identification, Comparison, and Validation of Robust Rumen Microbial Biomarkers for Methane Emissions Using Diverse Bos Taurus Breeds and Basal Diets
Marc D. Auffret et al.
FRONTIERS IN MICROBIOLOGY (2018)
A pathway for biological methane production using bacterial iron-only nitrogenase
Yanning Zheng et al.
NATURE MICROBIOLOGY (2018)
Addressing Global Ruminant Agricultural Challenges Through Understanding the Rumen Microbiome: Past, Present, and Future
Sharon A. Huws et al.
FRONTIERS IN MICROBIOLOGY (2018)
Host genetics and the rumen microbiome jointly associate with methane emissions in dairy cows
Gareth Frank Difford et al.
PLOS GENETICS (2018)
The STRING database in 2017: quality-controlled protein-protein association networks, made broadly accessible
Damian Szklarczyk et al.
NUCLEIC ACIDS RESEARCH (2017)
Competition between Methanogens and Acetogens in Biocathodes: A Comparison between Potentiostatic and Galvanostatic Control
Sam D. Molenaar et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2017)
Ninety-nine de novo assembled genomes from the moose (Alces alces) rumen microbiome provide new insights into microbial plant biomass degradation
Olov Svartstrom et al.
ISME JOURNAL (2017)
Mapping the ecological networks of microbial communities
Yandong Xiao et al.
NATURE COMMUNICATIONS (2017)
Global metabolic interaction network of the human gut microbiota for context-specific community-scale analysis
Jaeyun Sung et al.
NATURE COMMUNICATIONS (2017)
Rumen anaerobic fungi create new opportunities for enhanced methane production from microalgae biomass
Sevcan Aydin et al.
ALGAL RESEARCH-BIOMASS BIOFUELS AND BIOPRODUCTS (2017)
Contribution of Ruminal Fungi, Archaea, Protozoa, and Bacteria to the Methane Suppression Caused by Oilseed Supplemented Diets
Shaopu Wang et al.
FRONTIERS IN MICROBIOLOGY (2017)
Methane Production in Dairy Cows Correlates with Rumen Methanogenic and Bacterial Community Structure
Rebecca Danielsson et al.
FRONTIERS IN MICROBIOLOGY (2017)
The ruminal microbiome associated with methane emissions from ruminant livestock
Ilma Tapio et al.
JOURNAL OF ANIMAL SCIENCE AND BIOTECHNOLOGY (2017)
Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life
Donovan H. Parks et al.
NATURE MICROBIOLOGY (2017)
The effect of rumen ciliates on chitinolytic activity, chitin content and the number of fungal zoospores in the rumen fluid of sheep
Renata Miltko et al.
ARCHIVES OF ANIMAL NUTRITION (2016)
Specific microbiome-dependent mechanisms underlie the energy harvest efficiency of ruminants
Sheerli Kruger Ben Shabat et al.
ISME JOURNAL (2016)
Effect of dietary nitrate level on enteric methane production, hydrogen emission, rumen fermentation, and nutrient digestibility in dairy cows
D. W. Olijhoek et al.
JOURNAL OF DAIRY SCIENCE (2016)
Bovine Host Genetic Variation Influences Rumen Microbial Methane Production with Best Selection Criterion for Low Methane Emitting and Efficiently Feed Converting Hosts Based on Metagenomic Gene Abundance
Rainer Roehe et al.
PLOS GENETICS (2016)
Rumen metagenome and metatranscriptome analyses of low methane yield sheep reveals a Sharpea-enriched microbiome characterised by lactic acid formation and utilisation
Janine Kamke et al.
MICROBIOME (2016)
Methylotrophic methanogenesis discovered in the archaeal phylum Verstraetearchaeota
Inka Vanwonterghem et al.
NATURE MICROBIOLOGY (2016)
Inhibition of methane and natural gas hydrate formation by altering the structure of water with amino acids
Jeong-Hoon Sa et al.
SCIENTIFIC REPORTS (2016)
The rumen microbial metagenome associated with high methane production in cattle
R. John Wallace et al.
BMC GENOMICS (2015)
The players may change but the game remains: network analyses of ruminal microbiomes suggest taxonomic differences mask functional similarity
Tasia M. Taxis et al.
NUCLEIC ACIDS RESEARCH (2015)
Rumen microbial community composition varies with diet and host, but a core microbiome is found across a wide geographical range
Gemma Henderson et al.
SCIENTIFIC REPORTS (2015)
The Role of Ciliate Protozoa in the Rumen
Charles J. Newbold et al.
FRONTIERS IN MICROBIOLOGY (2015)
Associative patterns among anaerobic fungi, methanogenic archaea, and bacterial communities in response to changes in diet and age in the rumen of dairy cows
Sanjay Kumar et al.
FRONTIERS IN MICROBIOLOGY (2015)
Niche distribution and influence of environmental parameters in marine microbial communities: a systematic review
Felipe H. Coutinho et al.
PEERJ (2015)
Dietary sources and their effects on animal production and environmental sustainability
Metha Wanapat et al.
ANIMAL NUTRITION (2015)
Hydrogen and methane emissions from beef cattle and their rumen microbial community vary with diet, time after feeding and genotype
John A. Rooke et al.
BRITISH JOURNAL OF NUTRITION (2014)
Anaerobic fungi (phylum Neocallimastigomycota): advances in understanding their taxonomy, life cycle, ecology, role and biotechnological potential
Robert J. Gruninger et al.
FEMS MICROBIOLOGY ECOLOGY (2014)
Methane yield phenotypes linked to differential gene expression in the sheep rumen microbiome
Weibing Shi et al.
GENOME RESEARCH (2014)
Archaeal abundance in post-mortem ruminal digesta may help predict methane emissions from beef cattle
R. John Wallace et al.
SCIENTIFIC REPORTS (2014)
Kraken: ultrafast metagenomic sequence classification using exact alignments
Derrick E. Wood et al.
GENOME BIOLOGY (2014)
Phylogenomic Data Support a Seventh Order of Methylotrophic Methanogens and Provide Insights into the Evolution of Methanogenesis
Guillaume Borrel et al.
GENOME BIOLOGY AND EVOLUTION (2013)
Effects of GC Bias in Next-Generation-Sequencing Data on De Novo Genome Assembly
Yen-Chun Chen et al.
PLOS ONE (2013)
Methylotrophic methanogenic Thermoplasmata implicated in reduced methane emissions from bovine rumen
Morten Poulsen et al.
NATURE COMMUNICATIONS (2013)
Methanogenic Population and CH4 Production in Swedish Dairy Cows Fed Different Levels of Forage
R. Danielsson et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)
Rumen protozoa and methanogenesis: not a simple cause-effect relationship
Diego P. Morgavi et al.
BRITISH JOURNAL OF NUTRITION (2012)
Using network analysis to explore co-occurrence patterns in soil microbial communities
Albert Barberan et al.
ISME JOURNAL (2012)
Microbial interactions: from networks to models
Karoline Faust et al.
NATURE REVIEWS MICROBIOLOGY (2012)
Inferring Correlation Networks from Genomic Survey Data
Jonathan Friedman et al.
PLOS COMPUTATIONAL BIOLOGY (2012)
Long-term defaunation increases the abundance of cellulolytic ruminococci and methanogens but does not affect the bacterial and methanogen diversity in the rumen of sheep
P. Mosoni et al.
JOURNAL OF ANIMAL SCIENCE (2011)
Relationship between rumen methanogens and methane production in dairy cows fed diets supplemented with a feed enzyme additive
M. Zhou et al.
JOURNAL OF APPLIED MICROBIOLOGY (2011)
Ruminant enteric methane mitigation: a review
D. J. Cottle et al.
ANIMAL PRODUCTION SCIENCE (2011)
Microbial ecosystem and methanogenesis in ruminants
D. P. Morgavi et al.
ANIMAL (2010)
Influence of hydrogen on rumen methane formation and fermentation balances through microbial growth kinetics and fermentation thermodynamics
Peter H. Janssen
ANIMAL FEED SCIENCE AND TECHNOLOGY (2010)
The Genome Sequence of the Rumen Methanogen Methanobrevibacter ruminantium Reveals New Possibilities for Controlling Ruminant Methane Emissions
Sinead C. Leahy et al.
PLOS ONE (2010)
Structure of the archaeal community of the rumen
Peter H. Janssen et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)
Methanogenic archaea: ecologically relevant differences in energy conservation
Rudolf K. Thauer et al.
NATURE REVIEWS MICROBIOLOGY (2008)
Construction, visualisation, and clustering of transcription networks from Microarray expression data
Tom C. Freeman et al.
PLOS COMPUTATIONAL BIOLOGY (2007)
The competitive success of Methanomicrococcus blatticola, a dominant methylotrophic methanogen in the cockroach hindgut, is supported by high substrate affinities and favorable thermodynamics
Wander W. Sprenger et al.
FEMS MICROBIOLOGY ECOLOGY (2007)
Fiber-degrading systems of different strains of the genus Fibrobacter
C Béra-Maillet et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2004)
Improved extraction of PCR-quality community DNA from digesta and fecal samples
ZT Yu et al.
BIOTECHNIQUES (2004)
Quantitative meta-analysis on the effects of defaunation of the rumen on growth, intake and digestion in ruminants
M Eugene et al.
LIVESTOCK PRODUCTION SCIENCE (2004)
Methane production by ruminants: its contribution to global warming
AR Moss et al.
ANNALES DE ZOOTECHNIE (2000)
The effect of a methanogen, Methanobrevibacter smithii, on the growth rate, organic acid production, and specific ATP activity of three predominant ruminal cellulolytic bacteria
JL Rychlik et al.
CURRENT MICROBIOLOGY (2000)