相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Genetic Mapping With Allele Dosage Information in Tetraploid Urochloa decumbens (Stapf) R. D. Webster Reveals Insights Into Spittlebug (Notozulia entreriana Berg) Resistance
Rebecca Caroline Ulbricht Ferreira et al.
FRONTIERS IN PLANT SCIENCE (2019)
Accounting for Errors in Low Coverage High-Throughput Sequencing Data When Constructing Genetic Maps Using Biparental Outcrossed Populations
Timothy P. Bilton et al.
GENETICS (2018)
Genetic Variance Partitioning and Genome-Wide Prediction with Allele Dosage Information in Autotetraploid Potato
Jeffrey B. Endelman et al.
GENETICS (2018)
Exploring the potential and limitations of genotyping-by-sequencing for SNP discovery and genotyping in tetraploid potato
Maxime Bastien et al.
GENOME (2018)
Accounting for Errors in Low Coverage High-Throughput Sequencing Data When Constructing Genetic Maps Using Biparental Outcrossed Populations
Timothy P. Bilton et al.
GENETICS (2018)
Genetic Variance Partitioning and Genome-Wide Prediction with Allele Dosage Information in Autotetraploid Potato
Jeffrey B. Endelman et al.
GENETICS (2018)
Genotyping Polyploids from Messy Sequencing Data
David Gerard et al.
GENETICS (2018)
SNP genotyping and parameter estimation in polyploids using low-coverage sequencing data
Paul D. Blischak et al.
BIOINFORMATICS (2018)
Genomic prediction of starch content and chipping quality in tetraploid potato using genotyping-by-sequencing
Elsa Sverrisdottir et al.
THEORETICAL AND APPLIED GENETICS (2017)
Automated tetraploid genotype calling by hierarchical clustering
Cari A. Schmitz Carley et al.
THEORETICAL AND APPLIED GENETICS (2017)
Molecular dating of phylogenetic divergence between Urochloa species based on complete chloroplast genomes
Marco Pessoa-Filho et al.
BMC GENOMICS (2017)
Imputing Genotypes in Biallelic Populations from Low-Coverage Sequence Data
Christopher A. Fragoso et al.
GENETICS (2016)
GBS-SNP-CROP: a reference-optional pipeline for SNP discovery and plant germplasm characterization using variable length, paired-end genotyping-by-sequencing data
Arthur T. O. Melo et al.
BMC BIOINFORMATICS (2016)
A Parthenogenesis Gene Candidate and Evidence for Segmental Allopolyploidy in Apomictic Brachiaria decumbens
Margaret Worthington et al.
GENETICS (2016)
Probabilistic Multilocus Haplotype Reconstruction in Outcrossing Tetraploids
Chaozhi Zheng et al.
GENETICS (2016)
Software for Genome-Wide Association Studies in Autopolyploids and Its Application to Potato
Umesh R. Rosyara et al.
PLANT GENOME (2016)
Probabilistic Multilocus Haplotype Reconstruction in Outcrossing Tetraploids
Chaozhi Zheng et al.
GENETICS (2016)
LinkImpute: Fast and Accurate Genotype Imputation for Nonmodel Organisms
Daniel Money et al.
G3-GENES GENOMES GENETICS (2015)
Using RNA-Seq to assemble a rose transcriptome with more than 13,000 full-length expressed genes and to develop the WagRhSNP 68k Axiom SNP array for rose (Rosa L.)
Carole F. S. Koning-Boucoiran et al.
FRONTIERS IN PLANT SCIENCE (2015)
Association studies using family pools of outcrossing crops based on allele-frequency estimates from DNA sequencing
Bilal H. Ashraf et al.
THEORETICAL AND APPLIED GENETICS (2014)
The value of improved pastures to Brazilian beef production
Liana Jank et al.
CROP & PASTURE SCIENCE (2014)
A Saturated Genetic Linkage Map of Autotetraploid Alfalfa (Medicago sativa L.) Developed Using Genotyping-by-Sequencing Is Highly Syntenous with the Medicago truncatula Genome
Xuehui Li et al.
G3-GENES GENOMES GENETICS (2014)
Novel Methods to Optimize Genotypic Imputation for Low-Coverage, Next-Generation Sequence Data in Crop Plants
Kelly Swarts et al.
PLANT GENOME (2014)
Haplotype assembly in polyploid genomes and identical by descent shared tracts
Derek Aguiar et al.
BIOINFORMATICS (2013)
Development and validation of microsatellite markers for Brachiaria ruziziensis obtained by partial genome assembly of Illumina single-end reads
Pedro I. T. Silva et al.
BMC GENOMICS (2013)
Linkage Analysis and QTL Mapping Using SNP Dosage Data in a Tetraploid Potato Mapping Population
Christine A. Hackett et al.
PLOS ONE (2013)
A Next-Generation Sequencing Method for Genotyping-by-Sequencing of Highly Heterozygous Autotetraploid Potato
Jan G. A. M. L. Uitdewilligen et al.
PLOS ONE (2013)
Imputation of Unordered Markers and the Impact on Genomic Selection Accuracy
Jessica E. Rutkoski et al.
G3-GENES GENOMES GENETICS (2013)
Factors Affecting the Accuracy of Genotype Imputation in Populations from Several Maize Breeding Programs
John M. Hickey et al.
CROP SCIENCE (2012)
Reference genome sequence of the model plant Setaria
Jeffrey L. Bennetzen et al.
NATURE BIOTECHNOLOGY (2012)
Fast gapped-read alignment with Bowtie 2
Ben Langmead et al.
NATURE METHODS (2012)
Efficient Exact Maximum a Posteriori Computation for Bayesian SNP Genotyping in Polyploids
Oliver Serang et al.
PLOS ONE (2012)
Development of High-Density Genetic Maps for Barley and Wheat Using a Novel Two-Enzyme Genotyping-by-Sequencing Approach
Jesse A. Poland et al.
PLOS ONE (2012)
Integration of Two Diploid Potato Linkage Maps with the Potato Genome Sequence
Kimberly J. Felcher et al.
PLOS ONE (2012)
The variant call format and VCFtools
Petr Danecek et al.
BIOINFORMATICS (2011)
Genotype calling in tetraploid species from bi-allelic marker data using mixture models
Roeland E. Voorrips et al.
BMC BIOINFORMATICS (2011)
A framework for variation discovery and genotyping using next-generation DNA sequencing data
Mark A. DePristo et al.
NATURE GENETICS (2011)
A Robust, Simple Genotyping-by-Sequencing (GBS) Approach for High Diversity Species
Robert J. Elshire et al.
PLOS ONE (2011)
Breeding tropical forages
L. Jank et al.
CROP BREEDING AND APPLIED BIOTECHNOLOGY (2011)
Genetic Diversity and Population Structure of the Brachiaria brizantha Germplasm
Bianca Baccili Zanotto Vigna et al.
Tropical Plant Biology (2011)
Genetic diversity and population structure analysis of the tropical pasture grass Brachiaria humidicola based on microsatellites, cytogenetics, morphological traits, and geographical origin
L. Jungmann et al.
GENOME (2010)
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
Aaron McKenna et al.
GENOME RESEARCH (2010)
The B73 Maize Genome: Complexity, Diversity, and Dynamics
Patrick S. Schnable et al.
SCIENCE (2009)
Inference of haplotypic phase and missing genotypes in polyploid organisms and variable copy number genomic regions
Shu-Yi Su et al.
BMC BIOINFORMATICS (2008)
Apomixis for cultivar development in tropical forage grasses
John W. Miles
CROP SCIENCE (2007)
The TIGR Rice Genome Annotation Resource: Improvements and new features
Shu Ouyang et al.
NUCLEIC ACIDS RESEARCH (2007)
Recurrent selection in a synthetic Brachiariagrass population improves resistance to three spittlebug species
JW Miles et al.
CROP SCIENCE (2006)