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Cory J. Knoot et al.
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Damini Jaiswal et al.
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Annesha Sengupta et al.
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Cholsoon Jang et al.
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Johannes Asplund-Samuelsson et al.
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Jasmine Chong et al.
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Xiao Qian et al.
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Kiyan Shabestary et al.
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Melissa Cano et al.
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Koo Nagasawa et al.
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Wenjing Lou et al.
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Xiaoming Tan et al.
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Charulata B. Prasannan et al.
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Justin Ungerer et al.
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Damini Jaiswal et al.
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Afshan Srikumar et al.
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Lara J. Jazmin et al.
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Xiao-yu Zheng et al.
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Mary H. Abernathy et al.
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John I. Hendry et al.
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Yunping Qiu et al.
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Kuo Song et al.
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Sudhir Kumar et al.
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Enea Pagliano et al.
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Yi-Fan Xu et al.
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Jingjie Yu et al.
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Alexandra Calteau et al.
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Xiaoqian Li et al.
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The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)
Ross Overbeek et al.
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Type III restriction-modification enzymes: a historical perspective
Desirazu N. Rao et al.
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Isotopic Ratio Outlier Analysis Global Metabolomics of Caenorhabditis elegans
Gregory S. Stupp et al.
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Yan Shi et al.
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Stefan Kopfmann et al.
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Julian Stevenson et al.
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Degang Ning et al.
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Patrick M. Shih et al.
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John W. K. Oliver et al.
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Sean J. Johnson et al.
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Daniel C. Ducat et al.
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Zhengxu Gao et al.
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Ariel Erental et al.
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Wai Ting Chan et al.
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Xinyao Liu et al.
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Amanda S. Fivian-Hughes et al.
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Kira S. Makarova et al.
BIOLOGY DIRECT (2009)
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Ramy K. Aziz et al.
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Ivica Letunic et al.
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Mauve: Multiple alignment of conserved genomic sequence with rearrangements
ACE Darling et al.
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J Matiasovicova et al.
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O Fiehn
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